RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 CA5BP1Q8WTZ4 195 aa7.55□□□□□ -1.2
PCDH9-202ENST00000377865 HES4Q9HCC6 221 aa7.55□□□□□ -1.2
PCDH9-202ENST00000377865 ZNF835Q9Y2P0 537 aa7.55□□□□□ -1.2
PCDH9-202ENST00000377865 THSD7BQ9C0I4 1608 aa7.55□□□□□ -1.2
PCDH9-202ENST00000377865 IGHV3-43A0A0B4J1X8 118 aa7.54□□□□□ -1.2
PCDH9-202ENST00000377865 A0A1W2PN81 502 aa7.54□□□□□ -1.2
PCDH9-202ENST00000377865 ISLRO14498 428 aa7.54□□□□□ -1.2
PCDH9-202ENST00000377865 IGHV3-43DP0DP04 118 aa7.54□□□□□ -1.2
PCDH9-202ENST00000377865 CTSSP25774 331 aa7.54□□□□□ -1.2
PCDH9-202ENST00000377865 UBE2L3P68036 154 aaKnown RBP7.54□□□□□ -1.2
PCDH9-202ENST00000377865 TFF2Q03403 129 aa7.54□□□□□ -1.2
PCDH9-202ENST00000377865 OR5I1Q13606 314 aa7.54□□□□□ -1.2
PCDH9-202ENST00000377865 SPATA45Q537H7 98 aa7.54□□□□□ -1.2
PCDH9-202ENST00000377865 TUSC5Q8IXB3 177 aa7.54□□□□□ -1.2
PCDH9-202ENST00000377865 OR4D5Q8NGN0 318 aa7.54□□□□□ -1.2
PCDH9-202ENST00000377865 MRPL18Q9H0U6 180 aaKnown RBP7.54□□□□□ -1.2
PCDH9-202ENST00000377865 NDUFB4O95168 129 aa7.54□□□□□ -1.2
PCDH9-202ENST00000377865 AMY1AP04745 511 aa7.54□□□□□ -1.2
PCDH9-202ENST00000377865 ZNF766Q5HY98 468 aa7.54□□□□□ -1.2
PCDH9-202ENST00000377865 WDR25Q64LD2 544 aaPredicted RBP7.54□□□□□ -1.2
PCDH9-202ENST00000377865 TGIF2LXQ8IUE1 241 aa7.54□□□□□ -1.2
PCDH9-202ENST00000377865 RCC1LQ96I51 464 aaKnown RBP7.54□□□□□ -1.2
PCDH9-202ENST00000377865 MRPL13Q9BYD1 178 aaKnown RBP7.54□□□□□ -1.2
PCDH9-202ENST00000377865 PXMP4Q9Y6I8 212 aa7.54□□□□□ -1.2
PCDH9-202ENST00000377865 M0R1B8 84 aa7.54□□□□□ -1.2
PCDH9-202ENST00000377865 SPINK4O60575 86 aa7.54□□□□□ -1.2
PCDH9-202ENST00000377865 HLA-DQA1P01909 254 aa7.54□□□□□ -1.2
PCDH9-202ENST00000377865 SRSF7Q16629 238 aaKnown RBP eCLIP7.54□□□□□ -1.2
PCDH9-202ENST00000377865 MAP1LC3CQ9BXW4 147 aa7.54□□□□□ -1.2
PCDH9-202ENST00000377865 WFDC1Q9HC57 220 aa7.54□□□□□ -1.2
PCDH9-202ENST00000377865 NPVFQ9HCQ7 196 aa7.54□□□□□ -1.2
PCDH9-202ENST00000377865 SERTM2A0A1B0GWG4 89 aa7.54□□□□□ -1.2
PCDH9-202ENST00000377865 TMEM170AQ8WVE7 144 aa7.54□□□□□ -1.2
PCDH9-202ENST00000377865 NDUFAF3Q9BU61 184 aa7.54□□□□□ -1.2
PCDH9-202ENST00000377865 TRAV34A0A0B4J273 112 aa7.53□□□□□ -1.2
PCDH9-202ENST00000377865 QRFPP83859 136 aa7.53□□□□□ -1.2
PCDH9-202ENST00000377865 CXorf67Q86X51 503 aaPredicted RBP7.53□□□□□ -1.2
PCDH9-202ENST00000377865 ABHD3Q8WU67 409 aa7.53□□□□□ -1.2
PCDH9-202ENST00000377865 WNT5BQ9H1J7 359 aa7.53□□□□□ -1.2
PCDH9-202ENST00000377865 WNT16Q9UBV4 365 aa7.53□□□□□ -1.2
PCDH9-202ENST00000377865 SYNGR3O43761 229 aa7.53□□□□□ -1.2
PCDH9-202ENST00000377865 HIST1H1EP10412 219 aaKnown RBP7.53□□□□□ -1.2
PCDH9-202ENST00000377865 NPY1RP25929 384 aa7.53□□□□□ -1.2
PCDH9-202ENST00000377865 COL10A1Q03692 680 aa7.53□□□□□ -1.2
PCDH9-202ENST00000377865 FGFRL1Q8N441 504 aa7.53□□□□□ -1.2
PCDH9-202ENST00000377865 OR2Z1Q8NG97 314 aa7.53□□□□□ -1.2
PCDH9-202ENST00000377865 WDYHV1Q96HA8 205 aa7.53□□□□□ -1.2
PCDH9-202ENST00000377865 SFRP2Q96HF1 295 aa7.53□□□□□ -1.2
PCDH9-202ENST00000377865 OR2V2Q96R30 315 aa7.53□□□□□ -1.2
PCDH9-202ENST00000377865 NDFIP1Q9BT67 221 aa7.53□□□□□ -1.2
PCDH9-202ENST00000377865 HSPB8Q9UJY1 196 aa7.53□□□□□ -1.2
PCDH9-202ENST00000377865 hCG_38984A0A1B0GV85 526 aa7.53□□□□□ -1.2
PCDH9-202ENST00000377865 TCF21O43680 179 aa7.53□□□□□ -1.2
PCDH9-202ENST00000377865 HIST1H2BKO60814 126 aa7.53□□□□□ -1.2
PCDH9-202ENST00000377865 HIST1H2BJP06899 126 aa7.53□□□□□ -1.2
PCDH9-202ENST00000377865 HIST1H2BOP23527 126 aa7.53□□□□□ -1.2
PCDH9-202ENST00000377865 HIST1H2BBP33778 126 aa7.53□□□□□ -1.2
PCDH9-202ENST00000377865 HIST1H2BDP58876 126 aa7.53□□□□□ -1.2
PCDH9-202ENST00000377865 HIST1H2BCP62807 126 aa7.53□□□□□ -1.2
PCDH9-202ENST00000377865 SUPT4H1P63272 117 aaKnown RBP7.53□□□□□ -1.2
PCDH9-202ENST00000377865 HIST2H2BEQ16778 126 aa7.53□□□□□ -1.2
PCDH9-202ENST00000377865 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.53□□□□□ -1.2
PCDH9-202ENST00000377865 PDPNQ86YL7 162 aa7.53□□□□□ -1.2
PCDH9-202ENST00000377865 C1orf174Q8IYL3 243 aa7.53□□□□□ -1.2
PCDH9-202ENST00000377865 UBALD2Q8IYN6 164 aa7.53□□□□□ -1.2
PCDH9-202ENST00000377865 ZADH2Q8N4Q0 377 aa7.53□□□□□ -1.2
PCDH9-202ENST00000377865 ZNF738Q8NE65 137 aa7.53□□□□□ -1.2
PCDH9-202ENST00000377865 HIST1H2BHQ93079 126 aa7.53□□□□□ -1.2
PCDH9-202ENST00000377865 HIST1H2BNQ99877 126 aa7.53□□□□□ -1.2
PCDH9-202ENST00000377865 HIST1H2BMQ99879 126 aa7.53□□□□□ -1.2
PCDH9-202ENST00000377865 CHODLQ9H9P2 273 aa7.53□□□□□ -1.2
PCDH9-202ENST00000377865 MSL2Q9HCI7 577 aa7.53□□□□□ -1.2
PCDH9-202ENST00000377865 DLL3Q9NYJ7 618 aa7.53□□□□□ -1.2
PCDH9-202ENST00000377865 TRPM7Q96QT4 1865 aa7.53□□□□□ -1.2
PCDH9-202ENST00000377865 TMEM265A0A087WTH1 108 aa7.53□□□□□ -1.2
PCDH9-202ENST00000377865 ZXDAP98168 799 aa7.53□□□□□ -1.2
PCDH9-202ENST00000377865 LPAL2Q16609 132 aa7.53□□□□□ -1.2
PCDH9-202ENST00000377865 GTF2H5Q6ZYL4 71 aa7.53□□□□□ -1.2
PCDH9-202ENST00000377865 DUSP15Q9H1R2 295 aaPredicted RBP7.53□□□□□ -1.2
PCDH9-202ENST00000377865 GAL3ST2Q9H3Q3 398 aa7.53□□□□□ -1.2
PCDH9-202ENST00000377865 RPRMQ9NS64 109 aa7.53□□□□□ -1.2
PCDH9-202ENST00000377865 IGLV3-32A0A0A0MS00 114 aa7.53□□□□□ -1.2
PCDH9-202ENST00000377865 OR2H2O95918 312 aa7.53□□□□□ -1.2
PCDH9-202ENST00000377865 CEACAM1P13688 526 aa7.53□□□□□ -1.2
PCDH9-202ENST00000377865 OPRK1P41145 380 aa7.53□□□□□ -1.2
PCDH9-202ENST00000377865 LYG1Q8N1E2 194 aa7.53□□□□□ -1.2
PCDH9-202ENST00000377865 HIST3H2BBQ8N257 126 aa7.53□□□□□ -1.2
PCDH9-202ENST00000377865 ZNF441Q8N8Z8 693 aa7.53□□□□□ -1.2
PCDH9-202ENST00000377865 STXBP6Q8NFX7 210 aa7.53□□□□□ -1.2
PCDH9-202ENST00000377865 MEX3AA1L020 520 aaKnown RBP7.52□□□□□ -1.21
PCDH9-202ENST00000377865 CDIPTO14735 213 aa7.52□□□□□ -1.21
PCDH9-202ENST00000377865 CTAG1AP78358 180 aa7.52□□□□□ -1.21
PCDH9-202ENST00000377865 NRN1LQ496H8 165 aa7.52□□□□□ -1.21
PCDH9-202ENST00000377865 FADS6Q8N9I5 356 aa7.52□□□□□ -1.21
PCDH9-202ENST00000377865 VSTM2AQ8TAG5 236 aa7.52□□□□□ -1.21
PCDH9-202ENST00000377865 SSMEM1Q8WWF3 244 aa7.52□□□□□ -1.21
PCDH9-202ENST00000377865 TMEM45BQ96B21 275 aa7.52□□□□□ -1.21
PCDH9-202ENST00000377865 QTRT1Q9BXR0 403 aaKnown RBP7.52□□□□□ -1.21
PCDH9-202ENST00000377865 CBLN4Q9NTU7 201 aa7.52□□□□□ -1.21
PCDH9-202ENST00000377865 MYOFQ9NZM1 2061 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms