RNA–Protein interactions for RNA: ENST00000377340.6

CRNKL1-202, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-202ENST00000377340 ZNF561Q8N587 486 aa7.15□□□□□ -1.26
CRNKL1-202ENST00000377340 OR9G1Q8NH87 305 aa7.15□□□□□ -1.26
CRNKL1-202ENST00000377340 C14orf79Q96F83 325 aa7.15□□□□□ -1.26
CRNKL1-202ENST00000377340 LYZL4Q96KX0 146 aa7.15□□□□□ -1.26
CRNKL1-202ENST00000377340 IDI2-AS1Q9NZ38 188 aa7.15□□□□□ -1.26
CRNKL1-202ENST00000377340 IGHV3-35A0A0C4DH35 117 aa7.15□□□□□ -1.26
CRNKL1-202ENST00000377340 CEACAM18A8MTB9 384 aa7.15□□□□□ -1.26
CRNKL1-202ENST00000377340 DFFBO76075 338 aa7.15□□□□□ -1.26
CRNKL1-202ENST00000377340 PTBP3O95758 552 aaKnown RBP7.15□□□□□ -1.26
CRNKL1-202ENST00000377340 F2RP25116 425 aa7.15□□□□□ -1.26
CRNKL1-202ENST00000377340 CEACAM8P31997 349 aaPredicted RBP7.15□□□□□ -1.26
CRNKL1-202ENST00000377340 PCP4P48539 62 aa7.15□□□□□ -1.26
CRNKL1-202ENST00000377340 GGNBP1Q5YKI7 109 aa7.15□□□□□ -1.26
CRNKL1-202ENST00000377340 HCP5Q6MZN7 132 aa7.15□□□□□ -1.26
CRNKL1-202ENST00000377340 WDR82Q6UXN9 313 aa7.15□□□□□ -1.26
CRNKL1-202ENST00000377340 LINC00299Q6ZSB3 139 aa7.15□□□□□ -1.26
CRNKL1-202ENST00000377340 LINC00596Q86U02 117 aa7.15□□□□□ -1.26
CRNKL1-202ENST00000377340 RPS4Y2Q8TD47 263 aa7.15□□□□□ -1.26
CRNKL1-202ENST00000377340 Q96M66 194 aa7.15□□□□□ -1.26
CRNKL1-202ENST00000377340 TPPP3Q9BW30 176 aa7.15□□□□□ -1.26
CRNKL1-202ENST00000377340 BPESC1Q9GZL8 116 aa7.15□□□□□ -1.26
CRNKL1-202ENST00000377340 RCL1Q9Y2P8 373 aaKnown RBP7.15□□□□□ -1.26
CRNKL1-202ENST00000377340 TNCP24821 2201 aa7.15□□□□□ -1.26
CRNKL1-202ENST00000377340 CENPEQ02224 2701 aa7.15□□□□□ -1.26
CRNKL1-202ENST00000377340 HMGB3O15347 200 aaKnown RBP7.15□□□□□ -1.27
CRNKL1-202ENST00000377340 HLA-DQB1P01920 261 aa7.15□□□□□ -1.27
CRNKL1-202ENST00000377340 OPCMLQ14982 345 aa7.15□□□□□ -1.27
CRNKL1-202ENST00000377340 OR10A7Q8NGE5 316 aa7.15□□□□□ -1.27
CRNKL1-202ENST00000377340 OR2T6Q8NHC8 308 aa7.15□□□□□ -1.27
CRNKL1-202ENST00000377340 RBPMSQ93062 196 aaKnown RBP7.15□□□□□ -1.27
CRNKL1-202ENST00000377340 NRIP2Q9BQI9 281 aa7.15□□□□□ -1.27
CRNKL1-202ENST00000377340 GINS3Q9BRX5 216 aa7.15□□□□□ -1.27
CRNKL1-202ENST00000377340 CEP192Q8TEP8 1941 aa7.15□□□□□ -1.27
CRNKL1-202ENST00000377340 IGKV1-9A0A0C4DH69 117 aa7.15□□□□□ -1.27
CRNKL1-202ENST00000377340 ANKRD20A5PA0PJZ0 165 aa7.15□□□□□ -1.27
CRNKL1-202ENST00000377340 HGFACQ04756 655 aa7.15□□□□□ -1.27
CRNKL1-202ENST00000377340 CLEC9AQ6UXN8 241 aa7.15□□□□□ -1.27
CRNKL1-202ENST00000377340 OR13A1Q8NGR1 328 aa7.15□□□□□ -1.27
CRNKL1-202ENST00000377340 LILRB1Q8NHL6 650 aaPredicted RBP7.15□□□□□ -1.27
CRNKL1-202ENST00000377340 ZNF649Q9BS31 505 aa7.15□□□□□ -1.27
CRNKL1-202ENST00000377340 Q9N2K0 584 aa7.15□□□□□ -1.27
CRNKL1-202ENST00000377340 PITPNC1Q9UKF7 332 aa7.15□□□□□ -1.27
CRNKL1-202ENST00000377340 UBE2L5PA0A1B0GUS4 154 aa7.14□□□□□ -1.27
CRNKL1-202ENST00000377340 ZNF785A8K8V0 405 aa7.14□□□□□ -1.27
CRNKL1-202ENST00000377340 GNG7O60262 68 aa7.14□□□□□ -1.27
CRNKL1-202ENST00000377340 FGF2P09038 288 aa7.14□□□□□ -1.27
CRNKL1-202ENST00000377340 CRYGSP22914 178 aa7.14□□□□□ -1.27
CRNKL1-202ENST00000377340 COL8A2P25067 703 aa7.14□□□□□ -1.27
CRNKL1-202ENST00000377340 NCMAPQ5T1S8 102 aa7.14□□□□□ -1.27
CRNKL1-202ENST00000377340 SEZ6L2Q6UXD5 910 aa7.14□□□□□ -1.27
CRNKL1-202ENST00000377340 LYZL2Q7Z4W2 148 aa7.14□□□□□ -1.27
CRNKL1-202ENST00000377340 CENPVQ7Z7K6 275 aaPredicted RBP7.14□□□□□ -1.27
CRNKL1-202ENST00000377340 HOGA1Q86XE5 327 aa7.14□□□□□ -1.27
CRNKL1-202ENST00000377340 ARL6IP6Q8N6S5 226 aa7.14□□□□□ -1.27
CRNKL1-202ENST00000377340 FAM212BQ9NTI7 297 aaPredicted RBP7.14□□□□□ -1.27
CRNKL1-202ENST00000377340 METTL1Q9UBP6 276 aaKnown RBP7.14□□□□□ -1.27
CRNKL1-202ENST00000377340 TRAV40A0A0B4J280 105 aa7.14□□□□□ -1.27
CRNKL1-202ENST00000377340 A0A0D9SG52 128 aa7.14□□□□□ -1.27
CRNKL1-202ENST00000377340 NDUFS7O75251 213 aa7.14□□□□□ -1.27
CRNKL1-202ENST00000377340 SCAF4O95104 1147 aaKnown RBP7.14□□□□□ -1.27
CRNKL1-202ENST00000377340 S100A6P06703 90 aa7.14□□□□□ -1.27
CRNKL1-202ENST00000377340 SPNP16150 400 aa7.14□□□□□ -1.27
CRNKL1-202ENST00000377340 ORM2P19652 201 aa7.14□□□□□ -1.27
CRNKL1-202ENST00000377340 HTR2BP41595 481 aa7.14□□□□□ -1.27
CRNKL1-202ENST00000377340 THBS3P49746 956 aa7.14□□□□□ -1.27
CRNKL1-202ENST00000377340 NCR3LG1Q68D85 454 aa7.14□□□□□ -1.27
CRNKL1-202ENST00000377340 CLEC18BQ6UXF7 455 aa7.14□□□□□ -1.27
CRNKL1-202ENST00000377340 C20orf204Q6ZNR8 217 aa7.14□□□□□ -1.27
CRNKL1-202ENST00000377340 VKORC1L1Q8N0U8 176 aa7.14□□□□□ -1.27
CRNKL1-202ENST00000377340 GCSAMQ8N6F7 178 aa7.14□□□□□ -1.27
CRNKL1-202ENST00000377340 ZNF418Q8TF45 676 aaPredicted RBP7.14□□□□□ -1.27
CRNKL1-202ENST00000377340 TMED6Q8WW62 240 aa7.14□□□□□ -1.27
CRNKL1-202ENST00000377340 NRGNQ92686 78 aa7.14□□□□□ -1.27
CRNKL1-202ENST00000377340 SLC25A38Q96DW6 304 aa7.14□□□□□ -1.27
CRNKL1-202ENST00000377340 RBM38Q9H0Z9 239 aaKnown RBP7.14□□□□□ -1.27
CRNKL1-202ENST00000377340 TMED3Q9Y3Q3 217 aa7.14□□□□□ -1.27
CRNKL1-202ENST00000377340 TMEM131Q92545 1883 aa7.14□□□□□ -1.27
CRNKL1-202ENST00000377340 C9orf170A2RU37 121 aa7.14□□□□□ -1.27
CRNKL1-202ENST00000377340 E5RGE8 158 aa7.14□□□□□ -1.27
CRNKL1-202ENST00000377340 CEACAM4O75871 244 aa7.14□□□□□ -1.27
CRNKL1-202ENST00000377340 SNRPCP09234 159 aaKnown RBP7.14□□□□□ -1.27
CRNKL1-202ENST00000377340 CHATP28329 748 aa7.14□□□□□ -1.27
CRNKL1-202ENST00000377340 IZUMO4Q1ZYL8 232 aa7.14□□□□□ -1.27
CRNKL1-202ENST00000377340 TMEM182Q6ZP80 229 aaPredicted RBP7.14□□□□□ -1.27
CRNKL1-202ENST00000377340 CADM3Q8N126 398 aa7.14□□□□□ -1.27
CRNKL1-202ENST00000377340 ZDHHC22Q8N966 263 aa7.14□□□□□ -1.27
CRNKL1-202ENST00000377340 DAZAP1Q96EP5 407 aaKnown RBP7.14□□□□□ -1.27
CRNKL1-202ENST00000377340 WDFY2Q96P53 400 aa7.14□□□□□ -1.27
CRNKL1-202ENST00000377340 V9GYS6 101 aa7.14□□□□□ -1.27
CRNKL1-202ENST00000377340 SORL1Q92673 2214 aa7.13□□□□□ -1.27
CRNKL1-202ENST00000377340 FAM24AA6NFZ4 105 aa7.13□□□□□ -1.27
CRNKL1-202ENST00000377340 A6NNC1 897 aa7.13□□□□□ -1.27
CRNKL1-202ENST00000377340 C12orf77C9JDV5 145 aa7.13□□□□□ -1.27
CRNKL1-202ENST00000377340 J3QR06 171 aa7.13□□□□□ -1.27
CRNKL1-202ENST00000377340 SFT2D2O95562 160 aa7.13□□□□□ -1.27
CRNKL1-202ENST00000377340 RAB32Q13637 225 aa7.13□□□□□ -1.27
CRNKL1-202ENST00000377340 ZNF260Q3ZCT1 412 aa7.13□□□□□ -1.27
CRNKL1-202ENST00000377340 UNQ5815/PRO19632Q6UWF5 114 aa7.13□□□□□ -1.27
CRNKL1-202ENST00000377340 UNQ9370/PRO34162Q6UXP9 181 aa7.13□□□□□ -1.27
CRNKL1-202ENST00000377340 POC1AQ8NBT0 407 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms