RNA–Protein interactions for RNA: ENST00000377011.6

VRK3-202, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-202ENST00000377011 SMDT1Q9H4I9 107 aa10.38□□□□□ -0.75
VRK3-202ENST00000377011 OPA3Q9H6K4 179 aa10.38□□□□□ -0.75
VRK3-202ENST00000377011 TMEM231Q9H6L2 316 aa10.38□□□□□ -0.75
VRK3-202ENST00000377011 MALRD1Q5VYJ5 2156 aa10.38□□□□□ -0.75
VRK3-202ENST00000377011 HIVEP2P31629 2446 aa10.37□□□□□ -0.75
VRK3-202ENST00000377011 A0A1B0GW64 132 aa10.37□□□□□ -0.75
VRK3-202ENST00000377011 S100A8P05109 93 aa10.37□□□□□ -0.75
VRK3-202ENST00000377011 APLNRP35414 380 aa10.37□□□□□ -0.75
VRK3-202ENST00000377011 PIGYQ3MUY2 71 aa10.37□□□□□ -0.75
VRK3-202ENST00000377011 CLEC9AQ6UXN8 241 aa10.37□□□□□ -0.75
VRK3-202ENST00000377011 FBXW12Q6X9E4 464 aa10.37□□□□□ -0.75
VRK3-202ENST00000377011 FAM219AQ8IW50 185 aa10.37□□□□□ -0.75
VRK3-202ENST00000377011 OR8G5Q8NG78 346 aa10.37□□□□□ -0.75
VRK3-202ENST00000377011 OR4D5Q8NGN0 318 aa10.37□□□□□ -0.75
VRK3-202ENST00000377011 OR1J1Q8NGS3 322 aa10.37□□□□□ -0.75
VRK3-202ENST00000377011 SLC25A40Q8TBP6 338 aa10.37□□□□□ -0.75
VRK3-202ENST00000377011 SFT2D1Q8WV19 159 aa10.37□□□□□ -0.75
VRK3-202ENST00000377011 OR2J1Q9GZK6 312 aa10.37□□□□□ -0.75
VRK3-202ENST00000377011 CACFD1Q9UGQ2 172 aa10.37□□□□□ -0.75
VRK3-202ENST00000377011 FAM96BQ9Y3D0 163 aa10.37□□□□□ -0.75
VRK3-202ENST00000377011 MXRA5Q9NR99 2828 aa10.37□□□□□ -0.75
VRK3-202ENST00000377011 C1orf196B1AJZ1 125 aa10.36□□□□□ -0.75
VRK3-202ENST00000377011 DIRAS3O95661 229 aa10.36□□□□□ -0.75
VRK3-202ENST00000377011 TSPAN15O95858 294 aa10.36□□□□□ -0.75
VRK3-202ENST00000377011 SCGB1D2O95969 90 aa10.36□□□□□ -0.75
VRK3-202ENST00000377011 PPYP01298 95 aa10.36□□□□□ -0.75
VRK3-202ENST00000377011 MT-ND4LP03901 98 aa10.36□□□□□ -0.75
VRK3-202ENST00000377011 CTXN2P0C2S0 81 aa10.36□□□□□ -0.75
VRK3-202ENST00000377011 MMP9P14780 707 aa10.36□□□□□ -0.75
VRK3-202ENST00000377011 FOSL1P15407 271 aa10.36□□□□□ -0.75
VRK3-202ENST00000377011 HOXB4P17483 251 aaPredicted RBP10.36□□□□□ -0.75
VRK3-202ENST00000377011 CD80P33681 288 aa10.36□□□□□ -0.75
VRK3-202ENST00000377011 PPOXP50336 477 aa10.36□□□□□ -0.75
VRK3-202ENST00000377011 PLP2Q04941 152 aa10.36□□□□□ -0.75
VRK3-202ENST00000377011 GNMTQ14749 295 aa10.36□□□□□ -0.75
VRK3-202ENST00000377011 MPV17LQ2QL34 196 aa10.36□□□□□ -0.75
VRK3-202ENST00000377011 LYZL2Q7Z4W2 148 aa10.36□□□□□ -0.75
VRK3-202ENST00000377011 DPPA2Q7Z7J5 298 aa10.36□□□□□ -0.75
VRK3-202ENST00000377011 LINC00596Q86U02 117 aa10.36□□□□□ -0.75
VRK3-202ENST00000377011 ZNF561Q8N587 486 aa10.36□□□□□ -0.75
VRK3-202ENST00000377011 TMEM56Q96MV1 263 aa10.36□□□□□ -0.75
VRK3-202ENST00000377011 TAAR3PQ9P1P4 343 aa10.36□□□□□ -0.75
VRK3-202ENST00000377011 TMEM56-RWDD3S4R434 201 aa10.36□□□□□ -0.75
VRK3-202ENST00000377011 IGLV3-9A0A075B6K5 115 aa10.36□□□□□ -0.75
VRK3-202ENST00000377011 PCP4L1A6NKN8 68 aa10.36□□□□□ -0.75
VRK3-202ENST00000377011 VWC2LB2RUY7 222 aa10.36□□□□□ -0.75
VRK3-202ENST00000377011 AADACP22760 399 aa10.36□□□□□ -0.75
VRK3-202ENST00000377011 COL8A2P25067 703 aa10.36□□□□□ -0.75
VRK3-202ENST00000377011 LMO1P25800 156 aa10.36□□□□□ -0.75
VRK3-202ENST00000377011 SNCAP37840 140 aa10.36□□□□□ -0.75
VRK3-202ENST00000377011 FXYD4P59646 89 aa10.36□□□□□ -0.75
VRK3-202ENST00000377011 PIGCQ92535 297 aa10.36□□□□□ -0.75
VRK3-202ENST00000377011 IL22RA2Q969J5 263 aa10.36□□□□□ -0.75
VRK3-202ENST00000377011 ERGIC1Q969X5 290 aa10.36□□□□□ -0.75
VRK3-202ENST00000377011 PBDC1Q9BVG4 233 aa10.36□□□□□ -0.75
VRK3-202ENST00000377011 REPIN1Q9BWE0 567 aaKnown RBP10.36□□□□□ -0.75
VRK3-202ENST00000377011 TMEM222Q9H0R3 208 aa10.36□□□□□ -0.75
VRK3-202ENST00000377011 RIMS4Q9H426 269 aaPredicted RBP10.36□□□□□ -0.75
VRK3-202ENST00000377011 C11orf1Q9H5F2 150 aa10.36□□□□□ -0.75
VRK3-202ENST00000377011 DYNLRB1Q9NP97 96 aa10.36□□□□□ -0.75
VRK3-202ENST00000377011 PLA2G2EQ9NZK7 142 aa10.36□□□□□ -0.75
VRK3-202ENST00000377011 IGHV4-61A0A0C4DH41 118 aa10.35□□□□□ -0.75
VRK3-202ENST00000377011 KIR2DS1A0A191URI9 304 aa10.35□□□□□ -0.75
VRK3-202ENST00000377011 C3orf85A0A1B0GTC6 90 aa10.35□□□□□ -0.75
VRK3-202ENST00000377011 TRDCB7Z8K6 153 aa10.35□□□□□ -0.75
VRK3-202ENST00000377011 WNT9BO14905 357 aa10.35□□□□□ -0.75
VRK3-202ENST00000377011 MPPED1O15442 326 aa10.35□□□□□ -0.75
VRK3-202ENST00000377011 PHF1O43189 567 aaPredicted RBP10.35□□□□□ -0.75
VRK3-202ENST00000377011 NAPSAO96009 420 aa10.35□□□□□ -0.75
VRK3-202ENST00000377011 NFYBP25208 207 aa10.35□□□□□ -0.75
VRK3-202ENST00000377011 IL2RGP31785 369 aa10.35□□□□□ -0.75
VRK3-202ENST00000377011 KIR2DS4P43632 304 aa10.35□□□□□ -0.75
VRK3-202ENST00000377011 FGF12P61328 243 aa10.35□□□□□ -0.75
VRK3-202ENST00000377011 ZNF266Q14584 549 aa10.35□□□□□ -0.75
VRK3-202ENST00000377011 KIR2DS1Q14954 304 aa10.35□□□□□ -0.75
VRK3-202ENST00000377011 PHLDA2Q53GA4 152 aa10.35□□□□□ -0.75
VRK3-202ENST00000377011 OR5L1Q8NGL2 311 aa10.35□□□□□ -0.75
VRK3-202ENST00000377011 KLF14Q8TD94 323 aaPredicted RBP10.35□□□□□ -0.75
VRK3-202ENST00000377011 FAM168AQ92567 244 aa10.35□□□□□ -0.75
VRK3-202ENST00000377011 TCEAL7Q9BRU2 100 aa10.35□□□□□ -0.75
VRK3-202ENST00000377011 BPESC1Q9GZL8 116 aa10.35□□□□□ -0.75
VRK3-202ENST00000377011 LRP5LA4QPB2 252 aa10.34□□□□□ -0.75
VRK3-202ENST00000377011 LILRA1O75019 489 aa10.34□□□□□ -0.75
VRK3-202ENST00000377011 PITX3O75364 302 aa10.34□□□□□ -0.75
VRK3-202ENST00000377011 TK1P04183 234 aa10.34□□□□□ -0.75
VRK3-202ENST00000377011 WNT2P09544 360 aa10.34□□□□□ -0.75
VRK3-202ENST00000377011 OR8U9P0C7N5 309 aa10.34□□□□□ -0.75
VRK3-202ENST00000377011 SMIM6P0DI80 62 aa10.34□□□□□ -0.75
VRK3-202ENST00000377011 DAOP14920 347 aa10.34□□□□□ -0.75
VRK3-202ENST00000377011 KCNJ3P48549 501 aa10.34□□□□□ -0.75
VRK3-202ENST00000377011 PPP1CBP62140 327 aa10.34□□□□□ -0.75
VRK3-202ENST00000377011 SP6Q3SY56 376 aa10.34□□□□□ -0.75
VRK3-202ENST00000377011 CLEC2AQ6UVW9 174 aa10.34□□□□□ -0.75
VRK3-202ENST00000377011 SLC25A26Q70HW3 274 aa10.34□□□□□ -0.75
VRK3-202ENST00000377011 MKXQ8IYA7 352 aa10.34□□□□□ -0.75
VRK3-202ENST00000377011 OR8U1Q8NH10 309 aa10.34□□□□□ -0.75
VRK3-202ENST00000377011 HPSE2Q8WWQ2 592 aa10.34□□□□□ -0.75
VRK3-202ENST00000377011 APOBEC3DQ96AK3 386 aaPredicted RBP10.34□□□□□ -0.75
VRK3-202ENST00000377011 SLC25A31Q9H0C2 315 aa10.34□□□□□ -0.75
VRK3-202ENST00000377011 SPACA1Q9HBV2 294 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms