RNA–Protein interactions for RNA: ENST00000376745.8

PPP1CA-203, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPP1CA, Length 1,476 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-203ENST00000376745 HOGA1Q86XE5 327 aa26.56■■□□□ 1.84
PPP1CA-203ENST00000376745 GVQW1Q8N7I0 195 aa26.56■■□□□ 1.84
PPP1CA-203ENST00000376745 ZNF251Q9BRH9 671 aa26.56■■□□□ 1.84
PPP1CA-203ENST00000376745 PIPOXQ9P0Z9 390 aa26.56■■□□□ 1.84
PPP1CA-203ENST00000376745 SAA2-SAA4A0A096LPE2 208 aa26.55■■□□□ 1.84
PPP1CA-203ENST00000376745 FAM106CPP0CH98 169 aa26.55■■□□□ 1.84
PPP1CA-203ENST00000376745 SAA2P0DJI9 122 aaPredicted RBP26.55■■□□□ 1.84
PPP1CA-203ENST00000376745 AWAT1Q58HT5 328 aa26.55■■□□□ 1.84
PPP1CA-203ENST00000376745 CAPSLQ8WWF8 208 aa26.55■■□□□ 1.84
PPP1CA-203ENST00000376745 MMP24Q9Y5R2 645 aa26.55■■□□□ 1.84
PPP1CA-203ENST00000376745 RAB29O14966 203 aa26.55■■□□□ 1.84
PPP1CA-203ENST00000376745 LPLP06858 475 aa26.55■■□□□ 1.84
PPP1CA-203ENST00000376745 SNRNP70P08621 437 aaKnown RBP26.55■■□□□ 1.84
PPP1CA-203ENST00000376745 CTXN2P0C2S0 81 aa26.55■■□□□ 1.84
PPP1CA-203ENST00000376745 CBX5P45973 191 aa26.55■■□□□ 1.84
PPP1CA-203ENST00000376745 CNIH2Q6PI25 160 aa26.55■■□□□ 1.84
PPP1CA-203ENST00000376745 OR4F5Q8NH21 305 aa26.55■■□□□ 1.84
PPP1CA-203ENST00000376745 ABHD14BQ96IU4 210 aa26.55■■□□□ 1.84
PPP1CA-203ENST00000376745 SLIRPQ9GZT3 109 aaKnown RBP26.55■■□□□ 1.84
PPP1CA-203ENST00000376745 MIXL1Q9H2W2 232 aa26.55■■□□□ 1.84
PPP1CA-203ENST00000376745 ZNF701M0R085 212 aaPredicted RBP26.54■■□□□ 1.84
PPP1CA-203ENST00000376745 CTDSP2O14595 271 aa26.54■■□□□ 1.84
PPP1CA-203ENST00000376745 EBI3Q14213 229 aa26.54■■□□□ 1.84
PPP1CA-203ENST00000376745 FAM71F2Q6NXP2 309 aa26.54■■□□□ 1.84
PPP1CA-203ENST00000376745 H1FOOQ8IZA3 346 aaPredicted RBP26.54■■□□□ 1.84
PPP1CA-203ENST00000376745 BEST4Q8NFU0 473 aa26.54■■□□□ 1.84
PPP1CA-203ENST00000376745 C16orf95Q9H693 158 aa26.54■■□□□ 1.84
PPP1CA-203ENST00000376745 RSL24D1Q9UHA3 163 aaKnown RBP26.54■■□□□ 1.84
PPP1CA-203ENST00000376745 CCDC160A6NGH7 325 aa26.53■■□□□ 1.84
PPP1CA-203ENST00000376745 MDKP21741 143 aaPredicted RBP26.53■■□□□ 1.84
PPP1CA-203ENST00000376745 C16orf82Q7Z2V1 217 aa26.53■■□□□ 1.84
PPP1CA-203ENST00000376745 RBM14Q96PK6 669 aaKnown RBP26.53■■□□□ 1.84
PPP1CA-203ENST00000376745 GINS4Q9BRT9 223 aa26.53■■□□□ 1.84
PPP1CA-203ENST00000376745 NPFFR1Q9GZQ6 430 aa26.53■■□□□ 1.84
PPP1CA-203ENST00000376745 FAM25AB3EWG3 89 aa26.52■■□□□ 1.84
PPP1CA-203ENST00000376745 FAM25CB3EWG5 89 aa26.52■■□□□ 1.84
PPP1CA-203ENST00000376745 FAM25GB3EWG6 89 aa26.52■■□□□ 1.84
PPP1CA-203ENST00000376745 CD1BP29016 333 aa26.52■■□□□ 1.84
PPP1CA-203ENST00000376745 PRSS3P35030 304 aa26.52■■□□□ 1.84
PPP1CA-203ENST00000376745 LINC01006Q8NI28 216 aa26.52■■□□□ 1.84
PPP1CA-203ENST00000376745 RANBP3Q9H6Z4 567 aaPredicted RBP26.52■■□□□ 1.84
PPP1CA-203ENST00000376745 ANAPC10Q9UM13 185 aa26.52■■□□□ 1.84
PPP1CA-203ENST00000376745 MRPS7Q9Y2R9 242 aaKnown RBP26.52■■□□□ 1.84
PPP1CA-203ENST00000376745 IGHV3-72A0A0B4J1Y9 119 aa26.51■■□□□ 1.83
PPP1CA-203ENST00000376745 PROP1O75360 226 aa26.51■■□□□ 1.83
PPP1CA-203ENST00000376745 OR2F2O95006 317 aa26.51■■□□□ 1.83
PPP1CA-203ENST00000376745 IGKV1D-33P01593 117 aa26.51■■□□□ 1.83
PPP1CA-203ENST00000376745 IGKV1-33P01594 117 aa26.51■■□□□ 1.83
PPP1CA-203ENST00000376745 SNAPC3Q92966 411 aa26.51■■□□□ 1.83
PPP1CA-203ENST00000376745 ADAM30Q9UKF2 790 aa26.51■■□□□ 1.83
PPP1CA-203ENST00000376745 RNF150Q9ULK6 438 aa26.51■■□□□ 1.83
PPP1CA-203ENST00000376745 TENM1Q9UKZ4 2725 aa26.51■■□□□ 1.83
PPP1CA-203ENST00000376745 A0A1B0GUS0 222 aa26.5■■□□□ 1.83
PPP1CA-203ENST00000376745 ZNF736B4DX44 427 aaPredicted RBP26.5■■□□□ 1.83
PPP1CA-203ENST00000376745 RPL39P5Q59GN2 51 aa26.5■■□□□ 1.83
PPP1CA-203ENST00000376745 S1PR3Q99500 378 aa26.5■■□□□ 1.83
PPP1CA-203ENST00000376745 NABP2Q9BQ15 211 aa26.5■■□□□ 1.83
PPP1CA-203ENST00000376745 SLC25A33Q9BSK2 321 aa26.5■■□□□ 1.83
PPP1CA-203ENST00000376745 MRPL20Q9BYC9 149 aaKnown RBP26.5■■□□□ 1.83
PPP1CA-203ENST00000376745 BEX1Q9HBH7 125 aa26.5■■□□□ 1.83
PPP1CA-203ENST00000376745 MEIS3P1A6NDR6 274 aa26.49■■□□□ 1.83
PPP1CA-203ENST00000376745 LSAMPQ13449 338 aa26.49■■□□□ 1.83
PPP1CA-203ENST00000376745 C12orf54Q6X4T0 127 aa26.49■■□□□ 1.83
PPP1CA-203ENST00000376745 LAX1Q8IWV1 398 aa26.49■■□□□ 1.83
PPP1CA-203ENST00000376745 GPX8Q8TED1 209 aa26.49■■□□□ 1.83
PPP1CA-203ENST00000376745 NXF2Q9GZY0 626 aaKnown RBP26.49■■□□□ 1.83
PPP1CA-203ENST00000376745 EXTL2Q9UBQ6 330 aa26.49■■□□□ 1.83
PPP1CA-203ENST00000376745 GAB2Q9UQC2 676 aa26.49■■□□□ 1.83
PPP1CA-203ENST00000376745 CLPSL1A2RUU4 121 aa26.49■■□□□ 1.83
PPP1CA-203ENST00000376745 RGS5O15539 181 aa26.49■■□□□ 1.83
PPP1CA-203ENST00000376745 TPPPO94811 219 aa26.49■■□□□ 1.83
PPP1CA-203ENST00000376745 OR8U9P0C7N5 309 aa26.49■■□□□ 1.83
PPP1CA-203ENST00000376745 Q8N6K4 173 aa26.49■■□□□ 1.83
PPP1CA-203ENST00000376745 OR4C13Q8NGP0 309 aa26.49■■□□□ 1.83
PPP1CA-203ENST00000376745 OR8U1Q8NH10 309 aa26.49■■□□□ 1.83
PPP1CA-203ENST00000376745 EAF1Q96JC9 268 aaPredicted RBP26.49■■□□□ 1.83
PPP1CA-203ENST00000376745 AKR1E2Q96JD6 320 aa26.49■■□□□ 1.83
PPP1CA-203ENST00000376745 HES1Q14469 280 aa26.48■■□□□ 1.83
PPP1CA-203ENST00000376745 Q8N2B8 174 aa26.48■■□□□ 1.83
PPP1CA-203ENST00000376745 SCPEP1Q9HB40 452 aa26.48■■□□□ 1.83
PPP1CA-203ENST00000376745 ZNF221Q9UK13 617 aa26.48■■□□□ 1.83
PPP1CA-203ENST00000376745 DNHD1Q96M86 4753 aa26.48■■□□□ 1.83
PPP1CA-203ENST00000376745 TMEM11P17152 192 aa26.47■■□□□ 1.83
PPP1CA-203ENST00000376745 NAT1P18440 290 aa26.47■■□□□ 1.83
PPP1CA-203ENST00000376745 BLCAPP62952 87 aa26.47■■□□□ 1.83
PPP1CA-203ENST00000376745 HNF4GQ14541 408 aa26.47■■□□□ 1.83
PPP1CA-203ENST00000376745 SNX29P2Q8IUI4 249 aa26.47■■□□□ 1.83
PPP1CA-203ENST00000376745 OR2T10Q8NGZ9 312 aa26.47■■□□□ 1.83
PPP1CA-203ENST00000376745 AMY1AP04745 511 aa26.46■■□□□ 1.83
PPP1CA-203ENST00000376745 AMY2AP04746 511 aa26.46■■□□□ 1.83
PPP1CA-203ENST00000376745 FCER2P06734 321 aa26.46■■□□□ 1.83
PPP1CA-203ENST00000376745 CT45A6P0DMU7 189 aa26.46■■□□□ 1.83
PPP1CA-203ENST00000376745 CT45A5P0DMU8 189 aa26.46■■□□□ 1.83
PPP1CA-203ENST00000376745 CT45A7P0DMV0 189 aa26.46■■□□□ 1.83
PPP1CA-203ENST00000376745 GPR12P47775 334 aa26.46■■□□□ 1.83
PPP1CA-203ENST00000376745 ARPC4P59998 168 aa26.46■■□□□ 1.83
PPP1CA-203ENST00000376745 ZNF436-AS1Q8NC38 126 aaPredicted RBP26.46■■□□□ 1.83
PPP1CA-203ENST00000376745 ZNF702PQ9H963 129 aa26.46■■□□□ 1.83
PPP1CA-203ENST00000376745 IFT46Q9NQC8 304 aa26.46■■□□□ 1.83
PPP1CA-203ENST00000376745 NFYAP23511 347 aaPredicted RBP26.45■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms