RNA–Protein interactions for RNA: ENST00000376636.7

VPS13A-205, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 11,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-205ENST00000376636 AURKAIP1Q9NWT8 199 aaPredicted RBP10.2□□□□□ -0.78
VPS13A-205ENST00000376636 FAM90A27PA6NNH2 459 aa10.2□□□□□ -0.78
VPS13A-205ENST00000376636 ST6GAL2Q96JF0 529 aa10.2□□□□□ -0.78
VPS13A-205ENST00000376636 NTMQ9P121 344 aa10.2□□□□□ -0.78
VPS13A-205ENST00000376636 C9orf172C9J069 976 aa10.2□□□□□ -0.78
VPS13A-205ENST00000376636 FAM106CPP0CH98 169 aa10.2□□□□□ -0.78
VPS13A-205ENST00000376636 GFRA1P56159 465 aa10.2□□□□□ -0.78
VPS13A-205ENST00000376636 PDCD1Q15116 288 aa10.2□□□□□ -0.78
VPS13A-205ENST00000376636 MS4A3Q96HJ5 214 aa10.2□□□□□ -0.78
VPS13A-205ENST00000376636 SH3BGRL3Q9H299 93 aa10.2□□□□□ -0.78
VPS13A-205ENST00000376636 COL11A1P12107 1806 aaPredicted RBP10.2□□□□□ -0.78
VPS13A-205ENST00000376636 NDUFB4O95168 129 aa10.19□□□□□ -0.78
VPS13A-205ENST00000376636 AGAP20933 346 aa10.19□□□□□ -0.78
VPS13A-205ENST00000376636 WFDC3Q8IUB2 231 aa10.19□□□□□ -0.78
VPS13A-205ENST00000376636 PRSS27Q9BQR3 290 aa10.19□□□□□ -0.78
VPS13A-205ENST00000376636 IL36RNQ9UBH0 155 aa10.19□□□□□ -0.78
VPS13A-205ENST00000376636 IGF2P01344 180 aa10.19□□□□□ -0.78
VPS13A-205ENST00000376636 KRTCAP3Q53RY4 240 aa10.19□□□□□ -0.78
VPS13A-205ENST00000376636 OR2Y1Q8NGV0 311 aa10.19□□□□□ -0.78
VPS13A-205ENST00000376636 PGLYRP4Q96LB8 373 aa10.19□□□□□ -0.78
VPS13A-205ENST00000376636 NRAPQ86VF7 1730 aa10.19□□□□□ -0.78
VPS13A-205ENST00000376636 CNTFRP26992 372 aa10.19□□□□□ -0.78
VPS13A-205ENST00000376636 KLK10O43240 276 aa10.19□□□□□ -0.78
VPS13A-205ENST00000376636 TMIGD3P0DMS9 266 aaPredicted RBP10.19□□□□□ -0.78
VPS13A-205ENST00000376636 MESTQ5EB52 335 aa10.19□□□□□ -0.78
VPS13A-205ENST00000376636 CXCL3P19876 107 aa10.19□□□□□ -0.78
VPS13A-205ENST00000376636 PRDM14Q9GZV8 571 aa10.19□□□□□ -0.78
VPS13A-205ENST00000376636 PARLQ9H300 379 aa10.19□□□□□ -0.78
VPS13A-205ENST00000376636 C7orf66A4D0T2 115 aa10.19□□□□□ -0.78
VPS13A-205ENST00000376636 APELAP0DMC3 54 aa10.19□□□□□ -0.78
VPS13A-205ENST00000376636 RHNO1Q9BSD3 238 aa10.19□□□□□ -0.78
VPS13A-205ENST00000376636 HEATR5AQ86XA9 2040 aa10.19□□□□□ -0.78
VPS13A-205ENST00000376636 PGLYRP3Q96LB9 341 aa10.19□□□□□ -0.78
VPS13A-205ENST00000376636 LRRK1Q38SD2 2015 aa10.19□□□□□ -0.78
VPS13A-205ENST00000376636 PRR35P0CG20 571 aa10.19□□□□□ -0.78
VPS13A-205ENST00000376636 ATP6V0CP27449 155 aa10.19□□□□□ -0.78
VPS13A-205ENST00000376636 CX3CL1P78423 397 aa10.19□□□□□ -0.78
VPS13A-205ENST00000376636 PRICKLE4Q2TBC4 344 aa10.19□□□□□ -0.78
VPS13A-205ENST00000376636 PTPMT1Q8WUK0 201 aaPredicted RBP10.19□□□□□ -0.78
VPS13A-205ENST00000376636 NPFFR1Q9GZQ6 430 aa10.19□□□□□ -0.78
VPS13A-205ENST00000376636 TRIOBPQ9H2D6 2365 aa10.19□□□□□ -0.78
VPS13A-205ENST00000376636 TRAV8-2A0A0B4J237 113 aa10.18□□□□□ -0.78
VPS13A-205ENST00000376636 PSG2P11465 335 aa10.18□□□□□ -0.78
VPS13A-205ENST00000376636 HBBP68871 147 aa10.18□□□□□ -0.78
VPS13A-205ENST00000376636 C10orf111Q8N326 155 aa10.18□□□□□ -0.78
VPS13A-205ENST00000376636 SLC25A10Q9UBX3 287 aaPredicted RBP10.18□□□□□ -0.78
VPS13A-205ENST00000376636 NKX2-6A6NCS4 301 aa10.18□□□□□ -0.78
VPS13A-205ENST00000376636 FFAR1O14842 300 aa10.18□□□□□ -0.78
VPS13A-205ENST00000376636 TMEM170BQ5T4T1 132 aa10.18□□□□□ -0.78
VPS13A-205ENST00000376636 MBNL2Q5VZF2 373 aaKnown RBP10.18□□□□□ -0.78
VPS13A-205ENST00000376636 SOSTQ9BQB4 213 aa10.18□□□□□ -0.78
VPS13A-205ENST00000376636 ZGRF1Q86YA3 2104 aa10.18□□□□□ -0.78
VPS13A-205ENST00000376636 ASB16Q96NS5 453 aa10.18□□□□□ -0.78
VPS13A-205ENST00000376636 H0Y980 276 aa10.18□□□□□ -0.78
VPS13A-205ENST00000376636 SSBP4Q9BWG4 385 aaPredicted RBP10.18□□□□□ -0.78
VPS13A-205ENST00000376636 RNF7Q9UBF6 113 aa10.18□□□□□ -0.78
VPS13A-205ENST00000376636 DPRXA6NFQ7 191 aa10.18□□□□□ -0.78
VPS13A-205ENST00000376636 GDF9O60383 454 aa10.18□□□□□ -0.78
VPS13A-205ENST00000376636 NXPH1P58417 271 aa10.18□□□□□ -0.78
VPS13A-205ENST00000376636 GNRHR2Q96P88 292 aa10.18□□□□□ -0.78
VPS13A-205ENST00000376636 MGST2Q99735 147 aa10.18□□□□□ -0.78
VPS13A-205ENST00000376636 PCGF1Q9BSM1 259 aa10.18□□□□□ -0.78
VPS13A-205ENST00000376636 CHST5Q9GZS9 411 aa10.18□□□□□ -0.78
VPS13A-205ENST00000376636 TREM2Q9NZC2 230 aa10.18□□□□□ -0.78
VPS13A-205ENST00000376636 TSPAN2O60636 221 aa10.18□□□□□ -0.78
VPS13A-205ENST00000376636 SRIP30626 198 aa10.18□□□□□ -0.78
VPS13A-205ENST00000376636 USP54Q70EL1 1684 aa10.18□□□□□ -0.78
VPS13A-205ENST00000376636 MC5RP33032 325 aa10.18□□□□□ -0.78
VPS13A-205ENST00000376636 PSG6Q00889 435 aa10.18□□□□□ -0.78
VPS13A-205ENST00000376636 ZNF793Q6ZN11 406 aa10.18□□□□□ -0.78
VPS13A-205ENST00000376636 CNRIP1Q96F85 164 aaPredicted RBP10.18□□□□□ -0.78
VPS13A-205ENST00000376636 SF3B5Q9BWJ5 86 aaKnown RBP10.18□□□□□ -0.78
VPS13A-205ENST00000376636 ATP5LO75964 103 aa10.18□□□□□ -0.78
VPS13A-205ENST00000376636 NUTF2P61970 127 aaKnown RBP10.18□□□□□ -0.78
VPS13A-205ENST00000376636 WIPI1Q5MNZ9 446 aaPredicted RBP10.18□□□□□ -0.78
VPS13A-205ENST00000376636 CRYGNQ8WXF5 182 aa10.18□□□□□ -0.78
VPS13A-205ENST00000376636 FSCN3Q9NQT6 498 aa10.18□□□□□ -0.78
VPS13A-205ENST00000376636 PLSCR2Q9NRY7 297 aa10.18□□□□□ -0.78
VPS13A-205ENST00000376636 CBLN4Q9NTU7 201 aa10.18□□□□□ -0.78
VPS13A-205ENST00000376636 METTL1Q9UBP6 276 aaKnown RBP10.18□□□□□ -0.78
VPS13A-205ENST00000376636 GALNSP34059 522 aa10.17□□□□□ -0.78
VPS13A-205ENST00000376636 RGP1Q92546 391 aaPredicted RBP10.17□□□□□ -0.78
VPS13A-205ENST00000376636 TMEM160Q9NX00 188 aa10.17□□□□□ -0.78
VPS13A-205ENST00000376636 TMEFF2Q9UIK5 374 aaPredicted RBP10.17□□□□□ -0.78
VPS13A-205ENST00000376636 NPIPB8E9PQR5 432 aa10.17□□□□□ -0.78
VPS13A-205ENST00000376636 NPIPB9F8W1W9 429 aa10.17□□□□□ -0.78
VPS13A-205ENST00000376636 NPIPB7O75200 414 aa10.17□□□□□ -0.78
VPS13A-205ENST00000376636 KLKB1P03952 638 aa10.17□□□□□ -0.78
VPS13A-205ENST00000376636 ERGP11308 486 aa10.17□□□□□ -0.78
VPS13A-205ENST00000376636 CKS1BP61024 79 aa10.17□□□□□ -0.78
VPS13A-205ENST00000376636 LRP10Q7Z4F1 713 aa10.17□□□□□ -0.78
VPS13A-205ENST00000376636 KIR3DL3Q8N743 410 aa10.17□□□□□ -0.78
VPS13A-205ENST00000376636 OR52M1Q8NGK5 317 aa10.17□□□□□ -0.78
VPS13A-205ENST00000376636 ZNF576Q9H609 170 aa10.17□□□□□ -0.78
VPS13A-205ENST00000376636 TRAV30A0A087WSZ9 112 aa10.17□□□□□ -0.78
VPS13A-205ENST00000376636 ETHE1O95571 254 aa10.17□□□□□ -0.78
VPS13A-205ENST00000376636 PATJQ8NI35 1801 aa10.17□□□□□ -0.78
VPS13A-205ENST00000376636 GPX1P07203 203 aa10.17□□□□□ -0.78
VPS13A-205ENST00000376636 DMRTA1Q5VZB9 504 aa10.17□□□□□ -0.78
VPS13A-205ENST00000376636 C17orf99Q6UX52 265 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms