RNA–Protein interactions for RNA: ENST00000374673.3

HSPG2-201, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-201ENST00000374673 TAS2R46P59540 309 aa12.1□□□□□ -0.47
HSPG2-201ENST00000374673 ACTBP60709 375 aa12.1□□□□□ -0.47
HSPG2-201ENST00000374673 UBA52P62987 128 aaKnown RBP12.1□□□□□ -0.47
HSPG2-201ENST00000374673 ACTG1P63261 375 aa12.1□□□□□ -0.47
HSPG2-201ENST00000374673 SSBP1Q04837 148 aaKnown RBP12.1□□□□□ -0.47
HSPG2-201ENST00000374673 CDK10Q15131 360 aa12.1□□□□□ -0.47
HSPG2-201ENST00000374673 PLA1AQ53H76 456 aa12.1□□□□□ -0.47
HSPG2-201ENST00000374673 RNASE12Q5GAN4 147 aaKnown RBP12.1□□□□□ -0.47
HSPG2-201ENST00000374673 FAM71F2Q6NXP2 309 aa12.1□□□□□ -0.47
HSPG2-201ENST00000374673 FAM131AQ6UXB0 335 aa12.1□□□□□ -0.47
HSPG2-201ENST00000374673 LYSMD2Q8IV50 215 aa12.1□□□□□ -0.47
HSPG2-201ENST00000374673 PIFOQ8TCI5 191 aa12.1□□□□□ -0.47
HSPG2-201ENST00000374673 RTN4IP1Q8WWV3 396 aaPredicted RBP12.1□□□□□ -0.47
HSPG2-201ENST00000374673 FCAMRQ8WWV6 532 aa12.1□□□□□ -0.47
HSPG2-201ENST00000374673 ABCB10Q9NRK6 738 aa12.1□□□□□ -0.47
HSPG2-201ENST00000374673 KLK11Q9UBX7 282 aa12.1□□□□□ -0.47
HSPG2-201ENST00000374673 SAA2-SAA4A0A096LPE2 208 aa12.09□□□□□ -0.47
HSPG2-201ENST00000374673 H3BUX3 64 aa12.09□□□□□ -0.47
HSPG2-201ENST00000374673 TRIM77I1YAP6 450 aa12.09□□□□□ -0.47
HSPG2-201ENST00000374673 RAB29O14966 203 aa12.09□□□□□ -0.47
HSPG2-201ENST00000374673 GSTZ1O43708 216 aaPredicted RBP12.09□□□□□ -0.47
HSPG2-201ENST00000374673 RBBP9O75884 186 aa12.09□□□□□ -0.47
HSPG2-201ENST00000374673 TUSC2O75896 110 aa12.09□□□□□ -0.47
HSPG2-201ENST00000374673 RNASE1P07998 156 aaKnown RBP12.09□□□□□ -0.47
HSPG2-201ENST00000374673 SAA2P0DJI9 122 aaPredicted RBP12.09□□□□□ -0.47
HSPG2-201ENST00000374673 PTBP1P26599 531 aaKnown RBP eCLIP12.09□□□□□ -0.47
HSPG2-201ENST00000374673 BRS3P32247 399 aa12.09□□□□□ -0.47
HSPG2-201ENST00000374673 DGCR2P98153 550 aa12.09□□□□□ -0.47
HSPG2-201ENST00000374673 HABP2Q14520 560 aaPredicted RBP12.09□□□□□ -0.47
HSPG2-201ENST00000374673 ZNF833PQ6ZTB9 187 aa12.09□□□□□ -0.47
HSPG2-201ENST00000374673 OVCH2Q7RTZ1 564 aa12.09□□□□□ -0.47
HSPG2-201ENST00000374673 OR5H2Q8NGV7 314 aa12.09□□□□□ -0.47
HSPG2-201ENST00000374673 CFHR4Q92496 578 aa12.09□□□□□ -0.47
HSPG2-201ENST00000374673 ABHD14BQ96IU4 210 aa12.09□□□□□ -0.47
HSPG2-201ENST00000374673 VPREB3Q9UKI3 123 aa12.09□□□□□ -0.47
HSPG2-201ENST00000374673 GAB2Q9UQC2 676 aa12.09□□□□□ -0.47
HSPG2-201ENST00000374673 OR2W1Q9Y3N9 320 aa12.09□□□□□ -0.47
HSPG2-201ENST00000374673 IGHV1-3A0A0C4DH29 117 aa12.08□□□□□ -0.48
HSPG2-201ENST00000374673 OR5H8P0DN80 308 aa12.08□□□□□ -0.48
HSPG2-201ENST00000374673 NFYAP23511 347 aaPredicted RBP12.08□□□□□ -0.48
HSPG2-201ENST00000374673 OR3A3P47888 321 aa12.08□□□□□ -0.48
HSPG2-201ENST00000374673 DYRK1AQ13627 763 aa12.08□□□□□ -0.48
HSPG2-201ENST00000374673 ZNF79Q15937 498 aa12.08□□□□□ -0.48
HSPG2-201ENST00000374673 SPANXN2Q5MJ10 180 aa12.08□□□□□ -0.48
HSPG2-201ENST00000374673 TGIF2LXQ8IUE1 241 aa12.08□□□□□ -0.48
HSPG2-201ENST00000374673 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.08□□□□□ -0.48
HSPG2-201ENST00000374673 ZFAND2BQ8WV99 257 aa12.08□□□□□ -0.48
HSPG2-201ENST00000374673 DUX5Q96PT3 197 aa12.08□□□□□ -0.48
HSPG2-201ENST00000374673 ZNF251Q9BRH9 671 aa12.08□□□□□ -0.48
HSPG2-201ENST00000374673 CHIAQ9BZP6 476 aa12.08□□□□□ -0.48
HSPG2-201ENST00000374673 EHFQ9NZC4 300 aa12.08□□□□□ -0.48
HSPG2-201ENST00000374673 ZNF107Q9UII5 783 aaPredicted RBP12.08□□□□□ -0.48
HSPG2-201ENST00000374673 TCF19Q9Y242 345 aa12.08□□□□□ -0.48
HSPG2-201ENST00000374673 RBMX2Q9Y388 322 aaKnown RBP12.08□□□□□ -0.48
HSPG2-201ENST00000374673 FAM90A9PA6NNJ1 464 aa12.07□□□□□ -0.48
HSPG2-201ENST00000374673 TIMM23O14925 209 aa12.07□□□□□ -0.48
HSPG2-201ENST00000374673 PMP2P02689 132 aa12.07□□□□□ -0.48
HSPG2-201ENST00000374673 OR8U9P0C7N5 309 aa12.07□□□□□ -0.48
HSPG2-201ENST00000374673 HLA-DMAP28067 261 aa12.07□□□□□ -0.48
HSPG2-201ENST00000374673 HRH1P35367 487 aa12.07□□□□□ -0.48
HSPG2-201ENST00000374673 REG1BP48304 166 aa12.07□□□□□ -0.48
HSPG2-201ENST00000374673 RAB13P51153 203 aa12.07□□□□□ -0.48
HSPG2-201ENST00000374673 ACTBL2Q562R1 376 aa12.07□□□□□ -0.48
HSPG2-201ENST00000374673 LINC00299Q6ZSB3 139 aa12.07□□□□□ -0.48
HSPG2-201ENST00000374673 OR8U1Q8NH10 309 aa12.07□□□□□ -0.48
HSPG2-201ENST00000374673 GIMAP1Q8WWP7 306 aa12.07□□□□□ -0.48
HSPG2-201ENST00000374673 S1PR3Q99500 378 aa12.07□□□□□ -0.48
HSPG2-201ENST00000374673 OR2D2Q9H210 308 aa12.07□□□□□ -0.48
HSPG2-201ENST00000374673 TNFRSF19Q9NS68 423 aa12.07□□□□□ -0.48
HSPG2-201ENST00000374673 PTTG2Q9NZH5 202 aa12.07□□□□□ -0.48
HSPG2-201ENST00000374673 ZNF221Q9UK13 617 aa12.07□□□□□ -0.48
HSPG2-201ENST00000374673 RNF150Q9ULK6 438 aa12.07□□□□□ -0.48
HSPG2-201ENST00000374673 RBM7Q9Y580 266 aaKnown RBP12.07□□□□□ -0.48
HSPG2-201ENST00000374673 ZNF736B4DX44 427 aaPredicted RBP12.06□□□□□ -0.48
HSPG2-201ENST00000374673 PROP1O75360 226 aa12.06□□□□□ -0.48
HSPG2-201ENST00000374673 TBPP20226 339 aa12.06□□□□□ -0.48
HSPG2-201ENST00000374673 FCGR2CP31995 323 aa12.06□□□□□ -0.48
HSPG2-201ENST00000374673 GPR12P47775 334 aa12.06□□□□□ -0.48
HSPG2-201ENST00000374673 RFX2P48378 723 aa12.06□□□□□ -0.48
HSPG2-201ENST00000374673 LUMP51884 338 aaPredicted RBP12.06□□□□□ -0.48
HSPG2-201ENST00000374673 TAS2R19P59542 299 aa12.06□□□□□ -0.48
HSPG2-201ENST00000374673 SRSF2Q01130 221 aaKnown RBP12.06□□□□□ -0.48
HSPG2-201ENST00000374673 RPL39P5Q59GN2 51 aa12.06□□□□□ -0.48
HSPG2-201ENST00000374673 VAX1Q5SQQ9 334 aa12.06□□□□□ -0.48
HSPG2-201ENST00000374673 ZNF660Q6AZW8 331 aaPredicted RBP12.06□□□□□ -0.48
HSPG2-201ENST00000374673 C16orf87Q6PH81 154 aa12.06□□□□□ -0.48
HSPG2-201ENST00000374673 DHRS11Q6UWP2 260 aa12.06□□□□□ -0.48
HSPG2-201ENST00000374673 LIAT1Q6ZQX7 453 aa12.06□□□□□ -0.48
HSPG2-201ENST00000374673 MOB3BQ86TA1 216 aa12.06□□□□□ -0.48
HSPG2-201ENST00000374673 THNSL2Q86YJ6 484 aa12.06□□□□□ -0.48
HSPG2-201ENST00000374673 DRAM1Q8N682 238 aa12.06□□□□□ -0.48
HSPG2-201ENST00000374673 TMEM229BQ8NBD8 167 aa12.06□□□□□ -0.48
HSPG2-201ENST00000374673 OR56B4Q8NH76 319 aa12.06□□□□□ -0.48
HSPG2-201ENST00000374673 NABP2Q9BQ15 211 aa12.06□□□□□ -0.48
HSPG2-201ENST00000374673 PITPNC1Q9UKF7 332 aa12.06□□□□□ -0.48
HSPG2-201ENST00000374673 IGKV1D-13A0A0B4J2D9 117 aa12.05□□□□□ -0.48
HSPG2-201ENST00000374673 A6NDX4 124 aa12.05□□□□□ -0.48
HSPG2-201ENST00000374673 PPYP01298 95 aa12.05□□□□□ -0.48
HSPG2-201ENST00000374673 CD74P04233 296 aa12.05□□□□□ -0.48
HSPG2-201ENST00000374673 CSF1P09603 554 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms