RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 ZIC4Q8N9L1 334 aa4.6□□□□□ -1.67
ATG4A-204ENST00000372246 GJC3Q8NFK1 279 aa4.6□□□□□ -1.67
ATG4A-204ENST00000372246 RNASE8Q8TDE3 154 aaKnown RBP4.6□□□□□ -1.67
ATG4A-204ENST00000372246 ANGPTL4Q9BY76 406 aa4.6□□□□□ -1.67
ATG4A-204ENST00000372246 ULBP2Q9BZM5 246 aa4.6□□□□□ -1.67
ATG4A-204ENST00000372246 MOB1AQ9H8S9 216 aa4.6□□□□□ -1.67
ATG4A-204ENST00000372246 PATZ1Q9HBE1 687 aaKnown RBP4.6□□□□□ -1.67
ATG4A-204ENST00000372246 GPR27Q9NS67 375 aa4.6□□□□□ -1.67
ATG4A-204ENST00000372246 CLN8Q9UBY8 286 aa4.6□□□□□ -1.67
ATG4A-204ENST00000372246 DKKL1Q9UK85 242 aa4.6□□□□□ -1.67
ATG4A-204ENST00000372246 TP53TG3Q9ULZ0 132 aa4.6□□□□□ -1.67
ATG4A-204ENST00000372246 LOC102724200A0A096LPH7 203 aaPredicted RBP4.6□□□□□ -1.67
ATG4A-204ENST00000372246 TRAV38-1A0A0B4J264 116 aa4.6□□□□□ -1.67
ATG4A-204ENST00000372246 C9orf172C9J069 976 aa4.6□□□□□ -1.67
ATG4A-204ENST00000372246 RBFOX2O43251 390 aaKnown RBP eCLIP4.6□□□□□ -1.67
ATG4A-204ENST00000372246 DHHO43323 396 aa4.6□□□□□ -1.67
ATG4A-204ENST00000372246 TGOLN2O43493 480 aa4.6□□□□□ -1.67
ATG4A-204ENST00000372246 WDR1O75083 606 aa4.6□□□□□ -1.67
ATG4A-204ENST00000372246 NXPH2O95156 264 aa4.6□□□□□ -1.67
ATG4A-204ENST00000372246 IFNA5P01569 189 aa4.6□□□□□ -1.67
ATG4A-204ENST00000372246 IGKV1-5P01602 117 aa4.6□□□□□ -1.67
ATG4A-204ENST00000372246 CST2P09228 141 aa4.6□□□□□ -1.67
ATG4A-204ENST00000372246 CCL3P10147 92 aa4.6□□□□□ -1.67
ATG4A-204ENST00000372246 ADMP35318 185 aa4.6□□□□□ -1.67
ATG4A-204ENST00000372246 OR3A1P47881 315 aa4.6□□□□□ -1.67
ATG4A-204ENST00000372246 ZNF133P52736 654 aaPredicted RBP4.6□□□□□ -1.67
ATG4A-204ENST00000372246 RBM11P57052 281 aaKnown RBP4.6□□□□□ -1.67
ATG4A-204ENST00000372246 GRB2P62993 217 aaKnown RBP4.6□□□□□ -1.67
ATG4A-204ENST00000372246 SHBQ15464 509 aa4.6□□□□□ -1.67
ATG4A-204ENST00000372246 KIAA0895LQ68EN5 471 aa4.6□□□□□ -1.67
ATG4A-204ENST00000372246 FBXO46Q6PJ61 603 aaPredicted RBP4.6□□□□□ -1.67
ATG4A-204ENST00000372246 YRDCQ86U90 279 aaKnown RBP4.6□□□□□ -1.67
ATG4A-204ENST00000372246 WFDC8Q8IUA0 241 aa4.6□□□□□ -1.67
ATG4A-204ENST00000372246 GBGT1Q8N5D6 347 aa4.6□□□□□ -1.67
ATG4A-204ENST00000372246 AGBL5Q8NDL9 886 aa4.6□□□□□ -1.67
ATG4A-204ENST00000372246 OR2M3Q8NG83 312 aa4.6□□□□□ -1.67
ATG4A-204ENST00000372246 SCGB1C1Q8TD33 95 aa4.6□□□□□ -1.67
ATG4A-204ENST00000372246 PP6455Q8WZ26 134 aa4.6□□□□□ -1.67
ATG4A-204ENST00000372246 ST8SIA1Q92185 356 aa4.6□□□□□ -1.67
ATG4A-204ENST00000372246 GNPNAT1Q96EK6 184 aaPredicted RBP4.6□□□□□ -1.67
ATG4A-204ENST00000372246 ZC2HC1AQ96GY0 325 aa4.6□□□□□ -1.67
ATG4A-204ENST00000372246 CCDC74BQ96LY2 380 aa4.6□□□□□ -1.67
ATG4A-204ENST00000372246 NOL4LQ96MY1 436 aaPredicted RBP4.6□□□□□ -1.67
ATG4A-204ENST00000372246 OXGR1Q96P68 337 aa4.6□□□□□ -1.67
ATG4A-204ENST00000372246 MS4A10Q96PG2 267 aa4.6□□□□□ -1.67
ATG4A-204ENST00000372246 LPAR2Q9HBW0 351 aa4.6□□□□□ -1.67
ATG4A-204ENST00000372246 PARD6AQ9NPB6 346 aa4.6□□□□□ -1.67
ATG4A-204ENST00000372246 MANBALQ9NQG1 85 aa4.6□□□□□ -1.67
ATG4A-204ENST00000372246 PLSCR4Q9NRQ2 329 aa4.6□□□□□ -1.67
ATG4A-204ENST00000372246 SLC39A9Q9NUM3 307 aa4.6□□□□□ -1.67
ATG4A-204ENST00000372246 PSENENQ9NZ42 101 aa4.6□□□□□ -1.67
ATG4A-204ENST00000372246 CISD1Q9NZ45 108 aaKnown RBP4.6□□□□□ -1.67
ATG4A-204ENST00000372246 MYOTQ9UBF9 498 aa4.6□□□□□ -1.67
ATG4A-204ENST00000372246 NAGKQ9UJ70 344 aa4.6□□□□□ -1.67
ATG4A-204ENST00000372246 KNTC1P50748 2209 aa4.59□□□□□ -1.67
ATG4A-204ENST00000372246 PRR14LQ5THK1 2151 aa4.59□□□□□ -1.67
ATG4A-204ENST00000372246 A0A0J9YW62 118 aa4.59□□□□□ -1.67
ATG4A-204ENST00000372246 HSFX4A0A1B0GTS1 333 aaPredicted RBP4.59□□□□□ -1.67
ATG4A-204ENST00000372246 HSFX3A0A1B0GWH4 333 aaPredicted RBP4.59□□□□□ -1.67
ATG4A-204ENST00000372246 AQP7P3A6NL99 342 aa4.59□□□□□ -1.67
ATG4A-204ENST00000372246 NPIPA2E9PIF3 369 aa4.59□□□□□ -1.67
ATG4A-204ENST00000372246 NPIPA3F8WFD2 350 aa4.59□□□□□ -1.67
ATG4A-204ENST00000372246 AQP7O14520 342 aa4.59□□□□□ -1.67
ATG4A-204ENST00000372246 RAMP3O60896 148 aa4.59□□□□□ -1.67
ATG4A-204ENST00000372246 TUSC2O75896 110 aa4.59□□□□□ -1.67
ATG4A-204ENST00000372246 CLDN14O95500 239 aa4.59□□□□□ -1.67
ATG4A-204ENST00000372246 IGHV3-13P01766 116 aa4.59□□□□□ -1.67
ATG4A-204ENST00000372246 IGHV3-7P01780 117 aa4.59□□□□□ -1.67
ATG4A-204ENST00000372246 ERVFC1-1P60608 527 aa4.59□□□□□ -1.67
ATG4A-204ENST00000372246 RAC3P60763 192 aa4.59□□□□□ -1.67
ATG4A-204ENST00000372246 MRPS11P82912 194 aaKnown RBP4.59□□□□□ -1.67
ATG4A-204ENST00000372246 PSG4Q00888 419 aa4.59□□□□□ -1.67
ATG4A-204ENST00000372246 MEF2BQ02080 365 aaPredicted RBP4.59□□□□□ -1.67
ATG4A-204ENST00000372246 HIST3H3Q16695 136 aa4.59□□□□□ -1.67
ATG4A-204ENST00000372246 ACTL10Q5JWF8 245 aa4.59□□□□□ -1.67
ATG4A-204ENST00000372246 ETFRF1Q6IPR1 90 aa4.59□□□□□ -1.67
ATG4A-204ENST00000372246 KMT5CQ86Y97 462 aa4.59□□□□□ -1.67
ATG4A-204ENST00000372246 CCDC71LQ8N9Z2 235 aa4.59□□□□□ -1.67
ATG4A-204ENST00000372246 ADPRHL1Q8NDY3 354 aa4.59□□□□□ -1.67
ATG4A-204ENST00000372246 NFAM1Q8NET5 270 aaPredicted RBP4.59□□□□□ -1.67
ATG4A-204ENST00000372246 CADM4Q8NFZ8 388 aa4.59□□□□□ -1.67
ATG4A-204ENST00000372246 OR2T10Q8NGZ9 312 aa4.59□□□□□ -1.67
ATG4A-204ENST00000372246 OR1L1Q8NH94 360 aa4.59□□□□□ -1.67
ATG4A-204ENST00000372246 OR2V1Q8NHB1 315 aa4.59□□□□□ -1.67
ATG4A-204ENST00000372246 TMEM56Q96MV1 263 aa4.59□□□□□ -1.67
ATG4A-204ENST00000372246 MTCH1Q9NZJ7 389 aa4.59□□□□□ -1.67
ATG4A-204ENST00000372246 VAX2Q9UIW0 290 aa4.59□□□□□ -1.67
ATG4A-204ENST00000372246 KCNS2Q9ULS6 477 aa4.59□□□□□ -1.67
ATG4A-204ENST00000372246 TMEM56-RWDD3S4R434 201 aa4.59□□□□□ -1.67
ATG4A-204ENST00000372246 RELNP78509 3460 aa4.59□□□□□ -1.67
ATG4A-204ENST00000372246 DOCK10Q96BY6 2186 aa4.59□□□□□ -1.67
ATG4A-204ENST00000372246 TRBV20OR9-2A0A075B6H5 130 aa4.58□□□□□ -1.68
ATG4A-204ENST00000372246 SERTM2A0A1B0GWG4 89 aa4.58□□□□□ -1.68
ATG4A-204ENST00000372246 A0A1B0GX78 115 aa4.58□□□□□ -1.68
ATG4A-204ENST00000372246 ZNF503-AS2A6NEH8 195 aa4.58□□□□□ -1.68
ATG4A-204ENST00000372246 NDUFB4O95168 129 aa4.58□□□□□ -1.68
ATG4A-204ENST00000372246 CLDN1O95832 211 aa4.58□□□□□ -1.68
ATG4A-204ENST00000372246 KRASP01116 189 aa4.58□□□□□ -1.68
ATG4A-204ENST00000372246 NGFP01138 241 aa4.58□□□□□ -1.68
ATG4A-204ENST00000372246 SERPINE2P07093 398 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms