RNA–Protein interactions for RNA: ENST00000371121.4

SMARCA1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-201ENST00000371121 SAXO1Q8IYX7 474 aa9.86□□□□□ -0.83
SMARCA1-201ENST00000371121 ZNF611Q8N823 705 aa9.86□□□□□ -0.83
SMARCA1-201ENST00000371121 OR51H1Q8NH63 302 aa9.86□□□□□ -0.83
SMARCA1-201ENST00000371121 PLEK2Q9NYT0 353 aa9.86□□□□□ -0.83
SMARCA1-201ENST00000371121 TP73-AS1Q9UF72 201 aa9.86□□□□□ -0.83
SMARCA1-201ENST00000371121 K7EN84 100 aa9.86□□□□□ -0.83
SMARCA1-201ENST00000371121 SPINK2P20155 84 aa9.86□□□□□ -0.83
SMARCA1-201ENST00000371121 MALLQ13021 153 aa9.86□□□□□ -0.83
SMARCA1-201ENST00000371121 SRSF7Q16629 238 aaKnown RBP eCLIP9.86□□□□□ -0.83
SMARCA1-201ENST00000371121 GCSAMLQ5JQS6 135 aa9.86□□□□□ -0.83
SMARCA1-201ENST00000371121 FFAR4Q5NUL3 377 aa9.86□□□□□ -0.83
SMARCA1-201ENST00000371121 RHBDD2Q6NTF9 364 aa9.86□□□□□ -0.83
SMARCA1-201ENST00000371121 SLC23A3Q6PIS1 610 aa9.86□□□□□ -0.83
SMARCA1-201ENST00000371121 WDR74Q6RFH5 385 aaPredicted RBP9.86□□□□□ -0.83
SMARCA1-201ENST00000371121 HLA-CQ95604 372 aa9.86□□□□□ -0.83
SMARCA1-201ENST00000371121 ZNF442Q9H7R0 627 aa9.86□□□□□ -0.83
SMARCA1-201ENST00000371121 OR6C6A6NF89 314 aa9.86□□□□□ -0.83
SMARCA1-201ENST00000371121 HYPMO75409 117 aa9.86□□□□□ -0.83
SMARCA1-201ENST00000371121 CDKN1BP46527 198 aa9.86□□□□□ -0.83
SMARCA1-201ENST00000371121 ZNF41P51814 821 aaPredicted RBP9.86□□□□□ -0.83
SMARCA1-201ENST00000371121 OR2M7Q8NG81 312 aa9.86□□□□□ -0.83
SMARCA1-201ENST00000371121 RCHY1Q96PM5 261 aa9.86□□□□□ -0.83
SMARCA1-201ENST00000371121 UHRF2Q96PU4 802 aa9.86□□□□□ -0.83
SMARCA1-201ENST00000371121 PRDM6Q9NQX0 595 aa9.86□□□□□ -0.83
SMARCA1-201ENST00000371121 FAM69BQ5VUD6 431 aa9.85□□□□□ -0.83
SMARCA1-201ENST00000371121 WDR5BQ86VZ2 330 aa9.85□□□□□ -0.83
SMARCA1-201ENST00000371121 BORCS8Q96FH0 119 aa9.85□□□□□ -0.83
SMARCA1-201ENST00000371121 CRISPLD2Q9H0B8 497 aa9.85□□□□□ -0.83
SMARCA1-201ENST00000371121 OR1A1Q9P1Q5 309 aa9.85□□□□□ -0.83
SMARCA1-201ENST00000371121 ATP23Q9Y6H3 246 aa9.85□□□□□ -0.83
SMARCA1-201ENST00000371121 TCRBV21S2A2A0A5A6 115 aa9.85□□□□□ -0.83
SMARCA1-201ENST00000371121 TOMM40O96008 361 aa9.85□□□□□ -0.83
SMARCA1-201ENST00000371121 BRWD1-AS2P59051 145 aa9.85□□□□□ -0.83
SMARCA1-201ENST00000371121 KRTCAP3Q53RY4 240 aa9.85□□□□□ -0.83
SMARCA1-201ENST00000371121 FAM180AQ6UWF9 173 aa9.85□□□□□ -0.83
SMARCA1-201ENST00000371121 FADS6Q8N9I5 356 aa9.85□□□□□ -0.83
SMARCA1-201ENST00000371121 C5orf30Q96GV9 206 aa9.85□□□□□ -0.83
SMARCA1-201ENST00000371121 STRADBQ9C0K7 418 aa9.85□□□□□ -0.83
SMARCA1-201ENST00000371121 IL23AQ9NPF7 189 aa9.85□□□□□ -0.83
SMARCA1-201ENST00000371121 MTCH1Q9NZJ7 389 aa9.85□□□□□ -0.83
SMARCA1-201ENST00000371121 SLC39A9Q9NUM3 307 aa9.85□□□□□ -0.83
SMARCA1-201ENST00000371121 SLC45A2Q9UMX9 530 aa9.85□□□□□ -0.83
SMARCA1-201ENST00000371121 UNC13CQ8NB66 2214 aa9.85□□□□□ -0.83
SMARCA1-201ENST00000371121 LINC01565O15544 149 aa9.84□□□□□ -0.83
SMARCA1-201ENST00000371121 WISP2O76076 250 aa9.84□□□□□ -0.83
SMARCA1-201ENST00000371121 FBLP22087 321 aaKnown RBP9.84□□□□□ -0.83
SMARCA1-201ENST00000371121 BLKP51451 505 aa9.84□□□□□ -0.83
SMARCA1-201ENST00000371121 HLA-BQ31612 363 aa9.84□□□□□ -0.83
SMARCA1-201ENST00000371121 SAPCD1Q5SSQ6 148 aa9.84□□□□□ -0.83
SMARCA1-201ENST00000371121 COL5A1-AS1Q5SY13 56 aa9.84□□□□□ -0.83
SMARCA1-201ENST00000371121 FAM27BQ5VT28 67 aa9.84□□□□□ -0.83
SMARCA1-201ENST00000371121 ANKRD37Q7Z713 158 aa9.84□□□□□ -0.83
SMARCA1-201ENST00000371121 SGMS2Q8NHU3 365 aa9.84□□□□□ -0.83
SMARCA1-201ENST00000371121 SCGB1C1Q8TD33 95 aa9.84□□□□□ -0.83
SMARCA1-201ENST00000371121 OR6C1Q96RD1 312 aa9.84□□□□□ -0.83
SMARCA1-201ENST00000371121 DHHO43323 396 aa9.84□□□□□ -0.83
SMARCA1-201ENST00000371121 P0C879 139 aa9.84□□□□□ -0.83
SMARCA1-201ENST00000371121 IGLC2P0DOY2 106 aa9.84□□□□□ -0.83
SMARCA1-201ENST00000371121 IGLC3P0DOY3 106 aa9.84□□□□□ -0.83
SMARCA1-201ENST00000371121 SPANXN5Q5MJ07 72 aa9.84□□□□□ -0.83
SMARCA1-201ENST00000371121 FAM53AQ6NSI3 398 aaPredicted RBP9.84□□□□□ -0.83
SMARCA1-201ENST00000371121 RDH5Q92781 318 aa9.84□□□□□ -0.83
SMARCA1-201ENST00000371121 LRFN3Q9BTN0 628 aa9.84□□□□□ -0.83
SMARCA1-201ENST00000371121 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.84□□□□□ -0.83
SMARCA1-201ENST00000371121 TIAF1O95411 115 aa9.84□□□□□ -0.83
SMARCA1-201ENST00000371121 CD99P14209 185 aa9.84□□□□□ -0.83
SMARCA1-201ENST00000371121 IGFBP7Q16270 282 aa9.84□□□□□ -0.83
SMARCA1-201ENST00000371121 SLC25A24Q6NUK1 477 aa9.84□□□□□ -0.83
SMARCA1-201ENST00000371121 PINX1Q96BK5 328 aaKnown RBP9.84□□□□□ -0.83
SMARCA1-201ENST00000371121 SFRP2Q96HF1 295 aa9.84□□□□□ -0.83
SMARCA1-201ENST00000371121 KLRF1Q9NZS2 232 aa9.84□□□□□ -0.83
SMARCA1-201ENST00000371121 CEP192Q8TEP8 1941 aa9.83□□□□□ -0.84
SMARCA1-201ENST00000371121 LILRA5A6NI73 299 aa9.83□□□□□ -0.84
SMARCA1-201ENST00000371121 NDUFB4O95168 129 aa9.83□□□□□ -0.84
SMARCA1-201ENST00000371121 PDGFBP01127 241 aaPredicted RBP9.83□□□□□ -0.84
SMARCA1-201ENST00000371121 PSMB3P49720 205 aa9.83□□□□□ -0.84
SMARCA1-201ENST00000371121 RPS16P62249 146 aaKnown RBP9.83□□□□□ -0.84
SMARCA1-201ENST00000371121 CNN3Q15417 329 aaKnown RBP9.83□□□□□ -0.84
SMARCA1-201ENST00000371121 TMEM183BQ1AE95 376 aa9.83□□□□□ -0.84
SMARCA1-201ENST00000371121 OR10G9Q8NGN4 311 aa9.83□□□□□ -0.84
SMARCA1-201ENST00000371121 OR10G7Q8NGN6 311 aa9.83□□□□□ -0.84
SMARCA1-201ENST00000371121 C22orf15Q8WYQ4 148 aa9.83□□□□□ -0.84
SMARCA1-201ENST00000371121 CIB3Q96Q77 187 aaPredicted RBP9.83□□□□□ -0.84
SMARCA1-201ENST00000371121 PROK2Q9HC23 129 aa9.83□□□□□ -0.84
SMARCA1-201ENST00000371121 TIMM9Q9Y5J7 89 aa9.83□□□□□ -0.84
SMARCA1-201ENST00000371121 CTXND1A0A1B0GTU2 59 aa9.83□□□□□ -0.84
SMARCA1-201ENST00000371121 C11orf94C9JXX5 98 aa9.83□□□□□ -0.84
SMARCA1-201ENST00000371121 RRHO14718 337 aa9.83□□□□□ -0.84
SMARCA1-201ENST00000371121 SLC38A11Q08AI6 406 aa9.83□□□□□ -0.84
SMARCA1-201ENST00000371121 SRXN1Q9BYN0 137 aa9.83□□□□□ -0.84
SMARCA1-201ENST00000371121 TMEM9BQ9NQ34 198 aa9.83□□□□□ -0.84
SMARCA1-201ENST00000371121 CHCHD2Q9Y6H1 151 aaPredicted RBP9.83□□□□□ -0.84
SMARCA1-201ENST00000371121 TET2Q6N021 2002 aaPredicted RBP9.83□□□□□ -0.84
SMARCA1-201ENST00000371121 TRBV11-1A0A0K0K1C0 115 aa9.83□□□□□ -0.84
SMARCA1-201ENST00000371121 LNP1A1A4G5 178 aa9.83□□□□□ -0.84
SMARCA1-201ENST00000371121 ITGB1BP1O14713 200 aa9.83□□□□□ -0.84
SMARCA1-201ENST00000371121 GPX1P07203 203 aa9.83□□□□□ -0.84
SMARCA1-201ENST00000371121 MYF5P13349 255 aa9.83□□□□□ -0.84
SMARCA1-201ENST00000371121 BPIFB3P59826 476 aa9.83□□□□□ -0.84
SMARCA1-201ENST00000371121 PPP1CBP62140 327 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms