RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 TEX36Q5VZQ5 186 aa2.93□□□□□ -1.94
MCF2-202ENST00000370573 FIP1L1Q6UN15 594 aaKnown RBP2.93□□□□□ -1.94
MCF2-202ENST00000370573 C17orf107Q6ZR85 190 aa2.93□□□□□ -1.94
MCF2-202ENST00000370573 GDPD3Q7L5L3 318 aa2.93□□□□□ -1.94
MCF2-202ENST00000370573 TRAPPC6BQ86SZ2 158 aa2.93□□□□□ -1.94
MCF2-202ENST00000370573 LINC00596Q86U02 117 aa2.93□□□□□ -1.94
MCF2-202ENST00000370573 OR4S1Q8NGB4 309 aa2.93□□□□□ -1.94
MCF2-202ENST00000370573 WIPF2Q8TF74 440 aaPredicted RBP2.93□□□□□ -1.94
MCF2-202ENST00000370573 C15orf40Q8WUR7 153 aa2.93□□□□□ -1.94
MCF2-202ENST00000370573 MAFIPQ8WZ33 124 aa2.93□□□□□ -1.94
MCF2-202ENST00000370573 CCL17Q92583 94 aa2.93□□□□□ -1.94
MCF2-202ENST00000370573 HARBI1Q96MB7 349 aa2.93□□□□□ -1.94
MCF2-202ENST00000370573 NEDD4LQ96PU5 975 aa2.93□□□□□ -1.94
MCF2-202ENST00000370573 SHARPINQ9H0F6 387 aa2.93□□□□□ -1.94
MCF2-202ENST00000370573 FAM212BQ9NTI7 297 aaPredicted RBP2.93□□□□□ -1.94
MCF2-202ENST00000370573 ZNF230Q9UIE0 474 aaPredicted RBP2.93□□□□□ -1.94
MCF2-202ENST00000370573 ANAPC10Q9UM13 185 aa2.93□□□□□ -1.94
MCF2-202ENST00000370573 PLEKHA6Q9Y2H5 1048 aa2.93□□□□□ -1.94
MCF2-202ENST00000370573 TANC2Q9HCD6 1990 aa2.93□□□□□ -1.94
MCF2-202ENST00000370573 TRAV39A0A0B4J263 110 aa2.93□□□□□ -1.94
MCF2-202ENST00000370573 ANKRD20A5PA0PJZ0 165 aa2.93□□□□□ -1.94
MCF2-202ENST00000370573 SERPINE3A8MV23 424 aa2.93□□□□□ -1.94
MCF2-202ENST00000370573 LGALS8O00214 317 aa2.93□□□□□ -1.94
MCF2-202ENST00000370573 ZNF737O75373 536 aa2.93□□□□□ -1.94
MCF2-202ENST00000370573 RBBP9O75884 186 aa2.93□□□□□ -1.94
MCF2-202ENST00000370573 NAPSAO96009 420 aa2.93□□□□□ -1.94
MCF2-202ENST00000370573 GYPAP02724 150 aa2.93□□□□□ -1.94
MCF2-202ENST00000370573 GLAP06280 429 aa2.93□□□□□ -1.94
MCF2-202ENST00000370573 TRAPPC2P0DI81 140 aa2.93□□□□□ -1.94
MCF2-202ENST00000370573 TRAPPC2BP0DI82 140 aa2.93□□□□□ -1.94
MCF2-202ENST00000370573 ZNF44P15621 663 aa2.93□□□□□ -1.94
MCF2-202ENST00000370573 BTCP35070 178 aa2.93□□□□□ -1.94
MCF2-202ENST00000370573 OR3A1P47881 315 aa2.93□□□□□ -1.94
MCF2-202ENST00000370573 MRPS10P82664 201 aaKnown RBP2.93□□□□□ -1.94
MCF2-202ENST00000370573 UBE2V1Q13404 147 aa2.93□□□□□ -1.94
MCF2-202ENST00000370573 ASAH1Q13510 395 aa2.93□□□□□ -1.94
MCF2-202ENST00000370573 ARFRP1Q13795 201 aa2.93□□□□□ -1.94
MCF2-202ENST00000370573 GAMTQ14353 236 aa2.93□□□□□ -1.94
MCF2-202ENST00000370573 ZMYND11Q15326 602 aa2.93□□□□□ -1.94
MCF2-202ENST00000370573 SMIM21Q3B7S5 101 aa2.93□□□□□ -1.94
MCF2-202ENST00000370573 TRIQKQ629K1 86 aa2.93□□□□□ -1.94
MCF2-202ENST00000370573 STUMQ69YW2 141 aa2.93□□□□□ -1.94
MCF2-202ENST00000370573 OR52W1Q6IF63 320 aa2.93□□□□□ -1.94
MCF2-202ENST00000370573 LYPD2Q6UXB3 125 aa2.93□□□□□ -1.94
MCF2-202ENST00000370573 AKAP14Q86UN6 197 aa2.93□□□□□ -1.94
MCF2-202ENST00000370573 FGFRL1Q8N441 504 aa2.93□□□□□ -1.94
MCF2-202ENST00000370573 ASCC1Q8N9N2 400 aaKnown RBP2.93□□□□□ -1.94
MCF2-202ENST00000370573 OR4D10Q8NGI6 311 aa2.93□□□□□ -1.94
MCF2-202ENST00000370573 NTN5Q8WTR8 489 aaPredicted RBP2.93□□□□□ -1.94
MCF2-202ENST00000370573 TMEM186Q96B77 213 aa2.93□□□□□ -1.94
MCF2-202ENST00000370573 GAFA1Q96PS6 74 aa2.93□□□□□ -1.94
MCF2-202ENST00000370573 CCL13Q99616 98 aa2.93□□□□□ -1.94
MCF2-202ENST00000370573 CMSS1Q9BQ75 279 aaKnown RBP2.93□□□□□ -1.94
MCF2-202ENST00000370573 ST6GALNAC5Q9BVH7 336 aa2.93□□□□□ -1.94
MCF2-202ENST00000370573 CHST6Q9GZX3 395 aa2.93□□□□□ -1.94
MCF2-202ENST00000370573 RAB1BQ9H0U4 201 aa2.93□□□□□ -1.94
MCF2-202ENST00000370573 PPA2Q9H2U2 334 aa2.93□□□□□ -1.94
MCF2-202ENST00000370573 DNAJC4Q9NNZ3 241 aa2.93□□□□□ -1.94
MCF2-202ENST00000370573 MAB21L2Q9Y586 359 aa2.93□□□□□ -1.94
MCF2-202ENST00000370573 NPTNQ9Y639 398 aa2.93□□□□□ -1.94
MCF2-202ENST00000370573 ITPR2Q14571 2701 aa2.92□□□□□ -1.94
MCF2-202ENST00000370573 PPIAL4EA0A075B759 164 aa2.92□□□□□ -1.94
MCF2-202ENST00000370573 LRRC30A6NM36 301 aa2.92□□□□□ -1.94
MCF2-202ENST00000370573 MCRIP1C9JLW8 97 aa2.92□□□□□ -1.94
MCF2-202ENST00000370573 PPIAL4DF5H284 164 aa2.92□□□□□ -1.94
MCF2-202ENST00000370573 J3QR06 171 aa2.92□□□□□ -1.94
MCF2-202ENST00000370573 PRAF2O60831 178 aa2.92□□□□□ -1.94
MCF2-202ENST00000370573 TSC22D2O75157 780 aa2.92□□□□□ -1.94
MCF2-202ENST00000370573 IGHV4-39P01824 125 aa2.92□□□□□ -1.94
MCF2-202ENST00000370573 MT-ND4P03905 459 aa2.92□□□□□ -1.94
MCF2-202ENST00000370573 CD3DP04234 171 aa2.92□□□□□ -1.94
MCF2-202ENST00000370573 FCGR3AP08637 254 aa2.92□□□□□ -1.94
MCF2-202ENST00000370573 ZNF735P0CB33 412 aa2.92□□□□□ -1.94
MCF2-202ENST00000370573 PPIAL4FP0DN26 164 aa2.92□□□□□ -1.94
MCF2-202ENST00000370573 IRF2P14316 349 aa2.92□□□□□ -1.94
MCF2-202ENST00000370573 DAOP14920 347 aa2.92□□□□□ -1.94
MCF2-202ENST00000370573 RPS2P15880 293 aaKnown RBP2.92□□□□□ -1.94
MCF2-202ENST00000370573 MUC1P15941 1255 aaPredicted RBP2.92□□□□□ -1.94
MCF2-202ENST00000370573 HLA-DMAP28067 261 aa2.92□□□□□ -1.94
MCF2-202ENST00000370573 GABRA2P47869 451 aa2.92□□□□□ -1.94
MCF2-202ENST00000370573 MRPS11P82912 194 aaKnown RBP2.92□□□□□ -1.94
MCF2-202ENST00000370573 RELQ04864 619 aaPredicted RBP2.92□□□□□ -1.94
MCF2-202ENST00000370573 ARL6IP1Q15041 203 aa2.92□□□□□ -1.94
MCF2-202ENST00000370573 PAN3Q58A45 887 aaKnown RBP2.92□□□□□ -1.94
MCF2-202ENST00000370573 RSBN1Q5VWQ0 802 aaPredicted RBP2.92□□□□□ -1.94
MCF2-202ENST00000370573 ZNF57Q68EA5 555 aaPredicted RBP2.92□□□□□ -1.94
MCF2-202ENST00000370573 ZNF600Q6ZNG1 722 aa2.92□□□□□ -1.94
MCF2-202ENST00000370573 ZNF497Q6ZNH5 498 aa2.92□□□□□ -1.94
MCF2-202ENST00000370573 ZNF788Q6ZQV5 615 aa2.92□□□□□ -1.94
MCF2-202ENST00000370573 GLCCI1Q86VQ1 547 aa2.92□□□□□ -1.94
MCF2-202ENST00000370573 HOGA1Q86XE5 327 aa2.92□□□□□ -1.94
MCF2-202ENST00000370573 GAPTQ8N292 157 aa2.92□□□□□ -1.94
MCF2-202ENST00000370573 TOMM5Q8N4H5 51 aa2.92□□□□□ -1.94
MCF2-202ENST00000370573 FAM216BQ8N7L0 139 aa2.92□□□□□ -1.94
MCF2-202ENST00000370573 TMEM229BQ8NBD8 167 aa2.92□□□□□ -1.94
MCF2-202ENST00000370573 ZNRF1Q8ND25 227 aa2.92□□□□□ -1.94
MCF2-202ENST00000370573 MRPL30Q8TCC3 161 aaKnown RBP2.92□□□□□ -1.94
MCF2-202ENST00000370573 SDSLQ96GA7 329 aa2.92□□□□□ -1.94
MCF2-202ENST00000370573 COQ2Q96H96 371 aa2.92□□□□□ -1.94
MCF2-202ENST00000370573 TXN2Q99757 166 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms