RNA–Protein interactions for RNA: ENST00000370544.9

LMO4-202, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 5,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-202ENST00000370544 BRCA1P38398 1863 aaKnown RBP16.91■□□□□ 0.3
LMO4-202ENST00000370544 ELOA3CA0A087WX78 387 aaPredicted RBP16.91■□□□□ 0.3
LMO4-202ENST00000370544 IGHV3-72A0A0B4J1Y9 119 aa16.91■□□□□ 0.3
LMO4-202ENST00000370544 HIST1H1EP10412 219 aaKnown RBP16.91■□□□□ 0.3
LMO4-202ENST00000370544 ZNF250P15622 560 aa16.91■□□□□ 0.3
LMO4-202ENST00000370544 MRPL54Q6P161 138 aaKnown RBP16.91■□□□□ 0.3
LMO4-202ENST00000370544 APCDD1LQ8NCL9 501 aa16.91■□□□□ 0.3
LMO4-202ENST00000370544 CHAC2Q8WUX2 184 aa16.91■□□□□ 0.3
LMO4-202ENST00000370544 P2RX4Q99571 388 aa16.91■□□□□ 0.3
LMO4-202ENST00000370544 KNTC1P50748 2209 aa16.91■□□□□ 0.3
LMO4-202ENST00000370544 NPIPB13A6NJU9 1138 aa16.91■□□□□ 0.3
LMO4-202ENST00000370544 NPIPB4C9JG80 1138 aa16.91■□□□□ 0.3
LMO4-202ENST00000370544 ZNF253O75346 499 aa16.91■□□□□ 0.3
LMO4-202ENST00000370544 HLA-DRB5Q30154 266 aa16.91■□□□□ 0.3
LMO4-202ENST00000370544 ZNF880Q6PDB4 577 aa16.91■□□□□ 0.3
LMO4-202ENST00000370544 PAXXQ9BUH6 204 aa16.91■□□□□ 0.3
LMO4-202ENST00000370544 RABAC1Q9UI14 185 aa16.91■□□□□ 0.3
LMO4-202ENST00000370544 NAAAQ02083 359 aa16.91■□□□□ 0.3
LMO4-202ENST00000370544 VWCEQ96DN2 955 aa16.91■□□□□ 0.3
LMO4-202ENST00000370544 IDI2-AS1Q9NZ38 188 aa16.91■□□□□ 0.3
LMO4-202ENST00000370544 SERF2P84101 59 aa16.91■□□□□ 0.3
LMO4-202ENST00000370544 FDX2Q6P4F2 183 aa16.91■□□□□ 0.3
LMO4-202ENST00000370544 TMEM252Q8N6L7 170 aa16.91■□□□□ 0.3
LMO4-202ENST00000370544 Q96M66 194 aa16.91■□□□□ 0.3
LMO4-202ENST00000370544 H1FOOQ8IZA3 346 aaPredicted RBP16.91■□□□□ 0.3
LMO4-202ENST00000370544 OR10C1Q96KK4 312 aa16.91■□□□□ 0.3
LMO4-202ENST00000370544 CALYQ9NYX4 217 aa16.91■□□□□ 0.3
LMO4-202ENST00000370544 ODAMA1E959 279 aa16.9■□□□□ 0.3
LMO4-202ENST00000370544 HYPMO75409 117 aa16.9■□□□□ 0.3
LMO4-202ENST00000370544 IGLV3-19P01714 112 aa16.9■□□□□ 0.3
LMO4-202ENST00000370544 P2RY4P51582 365 aa16.9■□□□□ 0.3
LMO4-202ENST00000370544 UBE2V2Q15819 145 aa16.9■□□□□ 0.3
LMO4-202ENST00000370544 SOSTQ9BQB4 213 aa16.9■□□□□ 0.3
LMO4-202ENST00000370544 MS4A7Q9GZW8 240 aaPredicted RBP16.9■□□□□ 0.3
LMO4-202ENST00000370544 METTL1Q9UBP6 276 aaKnown RBP16.9■□□□□ 0.3
LMO4-202ENST00000370544 PXMP4Q9Y6I8 212 aa16.9■□□□□ 0.3
LMO4-202ENST00000370544 CEACAM18A8MTB9 384 aa16.9■□□□□ 0.3
LMO4-202ENST00000370544 PTPRFP10586 1907 aa16.9■□□□□ 0.3
LMO4-202ENST00000370544 TIMP4Q99727 224 aa16.9■□□□□ 0.3
LMO4-202ENST00000370544 RBKSQ9H477 322 aa16.9■□□□□ 0.3
LMO4-202ENST00000370544 CHCHD2Q9Y6H1 151 aaPredicted RBP16.9■□□□□ 0.3
LMO4-202ENST00000370544 GFRA3O60609 400 aa16.9■□□□□ 0.3
LMO4-202ENST00000370544 COX6B1P14854 86 aa16.9■□□□□ 0.3
LMO4-202ENST00000370544 LTBRP36941 435 aa16.9■□□□□ 0.3
LMO4-202ENST00000370544 WDR90Q96KV7 1748 aa16.9■□□□□ 0.3
LMO4-202ENST00000370544 THY1P04216 161 aa16.9■□□□□ 0.3
LMO4-202ENST00000370544 SNRNP40Q96DI7 357 aaKnown RBP16.9■□□□□ 0.3
LMO4-202ENST00000370544 LYRM2Q9NU23 88 aaPredicted RBP16.9■□□□□ 0.3
LMO4-202ENST00000370544 ELF5Q9UKW6 265 aaPredicted RBP16.9■□□□□ 0.3
LMO4-202ENST00000370544 J3QR89 54 aa16.89■□□□□ 0.29
LMO4-202ENST00000370544 LDLRAD3Q86YD5 345 aa16.89■□□□□ 0.29
LMO4-202ENST00000370544 TRAF4Q9BUZ4 470 aaPredicted RBP16.89■□□□□ 0.29
LMO4-202ENST00000370544 ATXN7O15265 892 aaPredicted RBP16.89■□□□□ 0.29
LMO4-202ENST00000370544 NDUFA2O43678 99 aa16.89■□□□□ 0.29
LMO4-202ENST00000370544 SMPD2O60906 423 aa16.89■□□□□ 0.29
LMO4-202ENST00000370544 DYNLRB2Q8TF09 96 aa16.89■□□□□ 0.29
LMO4-202ENST00000370544 FAM216AQ8WUB2 273 aa16.89■□□□□ 0.29
LMO4-202ENST00000370544 PRR19A6NJB7 356 aa16.89■□□□□ 0.29
LMO4-202ENST00000370544 RPL13AP40429 203 aaKnown RBP16.89■□□□□ 0.29
LMO4-202ENST00000370544 TMEM116Q8NCL8 245 aa16.89■□□□□ 0.29
LMO4-202ENST00000370544 FAM106CPP0CH98 169 aa16.89■□□□□ 0.29
LMO4-202ENST00000370544 HTN1P15515 57 aa16.89■□□□□ 0.29
LMO4-202ENST00000370544 OR10J1P30954 320 aa16.89■□□□□ 0.29
LMO4-202ENST00000370544 WFDC3Q8IUB2 231 aa16.89■□□□□ 0.29
LMO4-202ENST00000370544 RNF115Q9Y4L5 304 aa16.89■□□□□ 0.29
LMO4-202ENST00000370544 IGKV3D-11A0A0A0MRZ8 115 aa16.88■□□□□ 0.29
LMO4-202ENST00000370544 HOXA6P31267 233 aa16.88■□□□□ 0.29
LMO4-202ENST00000370544 LAIR2Q6ISS4 152 aa16.88■□□□□ 0.29
LMO4-202ENST00000370544 TMEM204Q9BSN7 226 aa16.88■□□□□ 0.29
LMO4-202ENST00000370544 TRBV23-1A0A0A0MS06 115 aa16.88■□□□□ 0.29
LMO4-202ENST00000370544 RFPL3SP0C7P2 107 aa16.88■□□□□ 0.29
LMO4-202ENST00000370544 ZNF883P0CG24 379 aa16.88■□□□□ 0.29
LMO4-202ENST00000370544 BCL2P10415 239 aa16.88■□□□□ 0.29
LMO4-202ENST00000370544 ZNF658BQ4V348 819 aaPredicted RBP16.88■□□□□ 0.29
LMO4-202ENST00000370544 NCMAPQ5T1S8 102 aa16.88■□□□□ 0.29
LMO4-202ENST00000370544 BMPR1BO00238 502 aa16.88■□□□□ 0.29
LMO4-202ENST00000370544 RECKO95980 971 aa16.88■□□□□ 0.29
LMO4-202ENST00000370544 RPL8P62917 257 aaKnown RBP16.88■□□□□ 0.29
LMO4-202ENST00000370544 SELENOHQ8IZQ5 122 aaKnown RBP16.88■□□□□ 0.29
LMO4-202ENST00000370544 PRSS1P07477 247 aa16.88■□□□□ 0.29
LMO4-202ENST00000370544 SCGB1C2P0DMR2 95 aa16.88■□□□□ 0.29
LMO4-202ENST00000370544 ID1P41134 155 aa16.88■□□□□ 0.29
LMO4-202ENST00000370544 ZNF703Q9H7S9 590 aaPredicted RBP16.88■□□□□ 0.29
LMO4-202ENST00000370544 AURKAIP1Q9NWT8 199 aaPredicted RBP16.88■□□□□ 0.29
LMO4-202ENST00000370544 FUT9Q9Y231 359 aa16.88■□□□□ 0.29
LMO4-202ENST00000370544 FAM74A7A6NL05 159 aa16.87■□□□□ 0.29
LMO4-202ENST00000370544 SULT1A2P50226 295 aa16.87■□□□□ 0.29
LMO4-202ENST00000370544 PAFAH1B2P68402 229 aa16.87■□□□□ 0.29
LMO4-202ENST00000370544 LRP11Q86VZ4 500 aa16.87■□□□□ 0.29
LMO4-202ENST00000370544 CALHM1Q8IU99 346 aa16.87■□□□□ 0.29
LMO4-202ENST00000370544 FDCSPQ8NFU4 85 aa16.87■□□□□ 0.29
LMO4-202ENST00000370544 RSG1Q9BU20 258 aa16.87■□□□□ 0.29
LMO4-202ENST00000370544 LOC285556D6RIA3 1793 aa16.87■□□□□ 0.29
LMO4-202ENST00000370544 DOCK3Q8IZD9 2030 aa16.87■□□□□ 0.29
LMO4-202ENST00000370544 GSX1Q9H4S2 264 aaPredicted RBP16.87■□□□□ 0.29
LMO4-202ENST00000370544 SUCLG1P53597 346 aaKnown RBP16.87■□□□□ 0.29
LMO4-202ENST00000370544 LOXL3P58215 753 aa16.87■□□□□ 0.29
LMO4-202ENST00000370544 GBGT1Q8N5D6 347 aa16.87■□□□□ 0.29
LMO4-202ENST00000370544 TMEM45BQ96B21 275 aa16.87■□□□□ 0.29
LMO4-202ENST00000370544 GPR146Q96CH1 333 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms