RNA–Protein interactions for RNA: ENST00000369846.8

LCA5-201, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,542 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-201ENST00000369846 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.48□□□□□ -1.21
LCA5-201ENST00000369846 ADAMTSL4Q6UY14 1074 aa7.48□□□□□ -1.21
LCA5-201ENST00000369846 ASCL4Q6XD76 172 aa7.48□□□□□ -1.21
LCA5-201ENST00000369846 ZNF793Q6ZN11 406 aa7.48□□□□□ -1.21
LCA5-201ENST00000369846 LINC00696Q6ZRV3 163 aa7.48□□□□□ -1.21
LCA5-201ENST00000369846 HOGA1Q86XE5 327 aa7.48□□□□□ -1.21
LCA5-201ENST00000369846 PGLYRP4Q96LB8 373 aa7.48□□□□□ -1.21
LCA5-201ENST00000369846 TRBV5-4A0A0C4DH59 114 aa7.48□□□□□ -1.21
LCA5-201ENST00000369846 AMBPP02760 352 aa7.48□□□□□ -1.21
LCA5-201ENST00000369846 RNASE1P07998 156 aaKnown RBP7.48□□□□□ -1.21
LCA5-201ENST00000369846 ASAH2BP0C7U1 165 aa7.48□□□□□ -1.21
LCA5-201ENST00000369846 GPR183P32249 361 aa7.48□□□□□ -1.21
LCA5-201ENST00000369846 CLDN18P56856 261 aa7.48□□□□□ -1.21
LCA5-201ENST00000369846 HYAL1Q12794 435 aa7.48□□□□□ -1.21
LCA5-201ENST00000369846 GAGE2BQ13066 116 aa7.48□□□□□ -1.21
LCA5-201ENST00000369846 GAGE2EQ4V326 116 aa7.48□□□□□ -1.21
LCA5-201ENST00000369846 OR1F12Q8NHA8 337 aa7.48□□□□□ -1.21
LCA5-201ENST00000369846 PKIBQ9C010 78 aa7.48□□□□□ -1.21
LCA5-201ENST00000369846 CHODLQ9H9P2 273 aa7.48□□□□□ -1.21
LCA5-201ENST00000369846 MRPS18AQ9NVS2 196 aaKnown RBP7.48□□□□□ -1.21
LCA5-201ENST00000369846 CISD1Q9NZ45 108 aaKnown RBP7.48□□□□□ -1.21
LCA5-201ENST00000369846 SEMA5BQ9P283 1151 aa7.48□□□□□ -1.21
LCA5-201ENST00000369846 GAGE2DQ9UEU5 116 aa7.48□□□□□ -1.21
LCA5-201ENST00000369846 RLFQ13129 1914 aa7.48□□□□□ -1.21
LCA5-201ENST00000369846 SRP19P09132 144 aaKnown RBP7.48□□□□□ -1.21
LCA5-201ENST00000369846 KIR2DL1P43626 348 aaPredicted RBP7.48□□□□□ -1.21
LCA5-201ENST00000369846 KIR2DL2P43627 348 aaPredicted RBP7.48□□□□□ -1.21
LCA5-201ENST00000369846 CCR5P51681 352 aa7.48□□□□□ -1.21
LCA5-201ENST00000369846 B4GALNT1Q00973 533 aa7.48□□□□□ -1.21
LCA5-201ENST00000369846 UBE2V1Q13404 147 aa7.48□□□□□ -1.21
LCA5-201ENST00000369846 CD200R1LQ6Q8B3 271 aa7.48□□□□□ -1.21
LCA5-201ENST00000369846 RFLNBQ8N5W9 214 aa7.48□□□□□ -1.21
LCA5-201ENST00000369846 OR8B12Q8NGG6 310 aa7.48□□□□□ -1.21
LCA5-201ENST00000369846 MRGPRDQ8TDS7 321 aa7.48□□□□□ -1.21
LCA5-201ENST00000369846 SLC37A2Q8TED4 501 aa7.48□□□□□ -1.21
LCA5-201ENST00000369846 TAF15Q92804 592 aaKnown RBP eCLIP7.48□□□□□ -1.21
LCA5-201ENST00000369846 WDYHV1Q96HA8 205 aa7.48□□□□□ -1.21
LCA5-201ENST00000369846 SGK494Q96LW2 274 aa7.48□□□□□ -1.21
LCA5-201ENST00000369846 KLK15Q9H2R5 256 aa7.48□□□□□ -1.21
LCA5-201ENST00000369846 PDFQ9HBH1 243 aa7.48□□□□□ -1.21
LCA5-201ENST00000369846 NHP2Q9NX24 153 aaKnown RBP7.48□□□□□ -1.21
LCA5-201ENST00000369846 PLA2G3Q9NZ20 509 aa7.48□□□□□ -1.21
LCA5-201ENST00000369846 COL2A1P02458 1487 aaPredicted RBP7.47□□□□□ -1.21
LCA5-201ENST00000369846 DNAH14Q0VDD8 3507 aa7.47□□□□□ -1.21
LCA5-201ENST00000369846 SBF1O95248 1867 aa7.47□□□□□ -1.21
LCA5-201ENST00000369846 A0A0A6YYD5 115 aa7.47□□□□□ -1.21
LCA5-201ENST00000369846 A0A1W2PRD5 423 aa7.47□□□□□ -1.21
LCA5-201ENST00000369846 A0A1W2PRF3 423 aa7.47□□□□□ -1.21
LCA5-201ENST00000369846 A0A1W2PRM7 423 aa7.47□□□□□ -1.21
LCA5-201ENST00000369846 LRRC30A6NM36 301 aa7.47□□□□□ -1.21
LCA5-201ENST00000369846 AMY1AP04745 511 aa7.47□□□□□ -1.21
LCA5-201ENST00000369846 PATE4P0C8F1 98 aa7.47□□□□□ -1.21
LCA5-201ENST00000369846 C2orf83Q53S99 150 aa7.47□□□□□ -1.21
LCA5-201ENST00000369846 TEPPQ6URK8 271 aa7.47□□□□□ -1.21
LCA5-201ENST00000369846 CBLN3Q6UW01 205 aa7.47□□□□□ -1.21
LCA5-201ENST00000369846 RPS19BP1Q86WX3 136 aaKnown RBP7.47□□□□□ -1.21
LCA5-201ENST00000369846 NOXO1Q8NFA2 376 aa7.47□□□□□ -1.21
LCA5-201ENST00000369846 GPHA2Q96T91 129 aa7.47□□□□□ -1.21
LCA5-201ENST00000369846 PSMG3Q9BT73 122 aaPredicted RBP7.47□□□□□ -1.21
LCA5-201ENST00000369846 WNT5BQ9H1J7 359 aa7.47□□□□□ -1.21
LCA5-201ENST00000369846 CDH23Q9H251 3354 aa7.47□□□□□ -1.21
LCA5-201ENST00000369846 DECR2Q9NUI1 292 aa7.47□□□□□ -1.21
LCA5-201ENST00000369846 CCL26Q9Y258 94 aa7.47□□□□□ -1.21
LCA5-201ENST00000369846 A0A1W2PPC1 479 aa7.47□□□□□ -1.21
LCA5-201ENST00000369846 ZIC3O60481 467 aa7.47□□□□□ -1.21
LCA5-201ENST00000369846 EML2O95834 649 aa7.47□□□□□ -1.21
LCA5-201ENST00000369846 MGPP08493 103 aa7.47□□□□□ -1.21
LCA5-201ENST00000369846 NPSP0C0P6 89 aa7.47□□□□□ -1.21
LCA5-201ENST00000369846 ZNF774Q6NX45 483 aa7.47□□□□□ -1.21
LCA5-201ENST00000369846 DOLPP1Q86YN1 238 aa7.47□□□□□ -1.21
LCA5-201ENST00000369846 MYEOVQ96EZ4 313 aa7.47□□□□□ -1.21
LCA5-201ENST00000369846 NCOR1P1Q9H4R4 102 aa7.47□□□□□ -1.21
LCA5-201ENST00000369846 DNAJB12Q9NXW2 375 aaKnown RBP7.47□□□□□ -1.21
LCA5-201ENST00000369846 KCNE1BA0A087WTH5 132 aa7.47□□□□□ -1.21
LCA5-201ENST00000369846 RNF222A6NCQ9 220 aa7.47□□□□□ -1.21
LCA5-201ENST00000369846 OR11H12B2RN74 326 aa7.47□□□□□ -1.21
LCA5-201ENST00000369846 ISG15P05161 165 aa7.47□□□□□ -1.21
LCA5-201ENST00000369846 ZNF708P17019 499 aa7.47□□□□□ -1.21
LCA5-201ENST00000369846 LCN2P80188 198 aa7.47□□□□□ -1.21
LCA5-201ENST00000369846 C1QL3Q5VWW1 255 aa7.47□□□□□ -1.21
LCA5-201ENST00000369846 ALKAL1Q6UXT8 129 aa7.47□□□□□ -1.21
LCA5-201ENST00000369846 PRNTQ86SH4 94 aa7.47□□□□□ -1.21
LCA5-201ENST00000369846 FAM181AQ8N9Y4 354 aa7.47□□□□□ -1.21
LCA5-201ENST00000369846 OR11H1Q8NG94 326 aa7.47□□□□□ -1.21
LCA5-201ENST00000369846 OR11H2Q8NH07 326 aa7.47□□□□□ -1.21
LCA5-201ENST00000369846 C18orf15Q96N68 181 aa7.47□□□□□ -1.21
LCA5-201ENST00000369846 LPAR2Q9HBW0 351 aa7.47□□□□□ -1.21
LCA5-201ENST00000369846 SF3B6Q9Y3B4 125 aaKnown RBP7.47□□□□□ -1.21
LCA5-201ENST00000369846 SHISA3A0PJX4 238 aa7.46□□□□□ -1.21
LCA5-201ENST00000369846 CD8AP01732 235 aa7.46□□□□□ -1.21
LCA5-201ENST00000369846 PSG1P11464 419 aa7.46□□□□□ -1.21
LCA5-201ENST00000369846 CRYBB3P26998 211 aa7.46□□□□□ -1.21
LCA5-201ENST00000369846 MNX1P50219 401 aaPredicted RBP7.46□□□□□ -1.21
LCA5-201ENST00000369846 SMIM21Q3B7S5 101 aa7.46□□□□□ -1.21
LCA5-201ENST00000369846 VMA21Q3ZAQ7 101 aa7.46□□□□□ -1.21
LCA5-201ENST00000369846 ACSF3Q4G176 576 aaPredicted RBP7.46□□□□□ -1.21
LCA5-201ENST00000369846 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.46□□□□□ -1.214e-6■■■■□ 19.8
LCA5-201ENST00000369846 FBLIM1Q8WUP2 373 aa7.46□□□□□ -1.21
LCA5-201ENST00000369846 LOXL4Q96JB6 756 aa7.46□□□□□ -1.21
LCA5-201ENST00000369846 PXMP4Q9Y6I8 212 aa7.46□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms