RNA–Protein interactions for RNA: ENST00000368841.6

SNX27-202, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best)

Gene SNX27, Length 7,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-202ENST00000368841 NDUFB4O95168 129 aa15.72■□□□□ 0.11
SNX27-202ENST00000368841 IGHV4-34P06331 123 aa15.72■□□□□ 0.11
SNX27-202ENST00000368841 FOXC2Q99958 501 aa15.72■□□□□ 0.11
SNX27-202ENST00000368841 STRCQ7RTU9 1775 aa15.72■□□□□ 0.11
SNX27-202ENST00000368841 FAM106CPP0CH98 169 aa15.72■□□□□ 0.11
SNX27-202ENST00000368841 C11orf91Q3C1V1 193 aa15.72■□□□□ 0.11
SNX27-202ENST00000368841 ANGPTL4Q9BY76 406 aa15.72■□□□□ 0.11
SNX27-202ENST00000368841 RGPD4Q7Z3J3 1758 aa15.72■□□□□ 0.11
SNX27-202ENST00000368841 BCORQ6W2J9 1755 aa15.72■□□□□ 0.11
SNX27-202ENST00000368841 RPLP1P05386 114 aaKnown RBP15.72■□□□□ 0.11
SNX27-202ENST00000368841 CDCP2Q5VXM1 449 aa15.72■□□□□ 0.11
SNX27-202ENST00000368841 WDR25Q64LD2 544 aaPredicted RBP15.72■□□□□ 0.11
SNX27-202ENST00000368841 BEX4Q9NWD9 120 aaPredicted RBP15.72■□□□□ 0.11
SNX27-202ENST00000368841 M0R143 59 aa15.72■□□□□ 0.11
SNX27-202ENST00000368841 TSPAN2O60636 221 aa15.72■□□□□ 0.11
SNX27-202ENST00000368841 ISXQ2M1V0 245 aa15.72■□□□□ 0.11
SNX27-202ENST00000368841 PIMREGQ9BSJ6 248 aa15.72■□□□□ 0.11
SNX27-202ENST00000368841 DUSP15Q9H1R2 295 aaPredicted RBP15.72■□□□□ 0.11
SNX27-202ENST00000368841 FADS6Q8N9I5 356 aa15.72■□□□□ 0.11
SNX27-202ENST00000368841 GAPDHP04406 335 aaKnown RBP15.71■□□□□ 0.11
SNX27-202ENST00000368841 PRB4P10163 310 aaPredicted RBP15.71■□□□□ 0.11
SNX27-202ENST00000368841 PRSS23O95084 383 aa15.71■□□□□ 0.11
SNX27-202ENST00000368841 ZNF250P15622 560 aa15.71■□□□□ 0.11
SNX27-202ENST00000368841 CHST5Q9GZS9 411 aa15.71■□□□□ 0.11
SNX27-202ENST00000368841 RAXQ9Y2V3 346 aa15.71■□□□□ 0.11
SNX27-202ENST00000368841 SIRT4Q9Y6E7 314 aaPredicted RBP15.71■□□□□ 0.11
SNX27-202ENST00000368841 TMEM218A2RU14 115 aa15.71■□□□□ 0.11
SNX27-202ENST00000368841 RALYQ9UKM9 306 aaKnown RBP15.71■□□□□ 0.11
SNX27-202ENST00000368841 HINT1P49773 126 aaPredicted RBP15.71■□□□□ 0.11
SNX27-202ENST00000368841 MFAP2P55001 183 aa15.71■□□□□ 0.11
SNX27-202ENST00000368841 OIT3Q8WWZ8 545 aa15.71■□□□□ 0.11
SNX27-202ENST00000368841 A0A1W2PQF6 199 aa15.71■□□□□ 0.11
SNX27-202ENST00000368841 CYB561D1Q8N8Q1 229 aa15.71■□□□□ 0.11
SNX27-202ENST00000368841 DIRC2Q96SL1 478 aa15.71■□□□□ 0.11
SNX27-202ENST00000368841 hCG_38984A0A1B0GV85 526 aa15.71■□□□□ 0.1
SNX27-202ENST00000368841 C9orf62Q8N4C0 152 aa15.71■□□□□ 0.1
SNX27-202ENST00000368841 TP53RKQ96S44 253 aa15.71■□□□□ 0.1
SNX27-202ENST00000368841 SMCHD1A6NHR9 2005 aa15.7■□□□□ 0.1
SNX27-202ENST00000368841 SLC25A17O43808 307 aa15.7■□□□□ 0.1
SNX27-202ENST00000368841 DCAF12L2Q5VW00 463 aa15.7■□□□□ 0.1
SNX27-202ENST00000368841 OR4A47Q6IF82 309 aa15.7■□□□□ 0.1
SNX27-202ENST00000368841 HMSDA8MTL9 139 aa15.7■□□□□ 0.1
SNX27-202ENST00000368841 PITX3O75364 302 aa15.7■□□□□ 0.1
SNX27-202ENST00000368841 KBTBD11O94819 623 aa15.7■□□□□ 0.1
SNX27-202ENST00000368841 MIC13Q5XKP0 118 aa15.7■□□□□ 0.1
SNX27-202ENST00000368841 WDFY1Q8IWB7 410 aa15.7■□□□□ 0.1
SNX27-202ENST00000368841 HMGA2P52926 109 aa15.7■□□□□ 0.1
SNX27-202ENST00000368841 DLX6P56179 175 aa15.7■□□□□ 0.1
SNX27-202ENST00000368841 ZNF645Q8N7E2 425 aa15.7■□□□□ 0.1
SNX27-202ENST00000368841 TRIP12Q14669 1992 aaPredicted RBP15.7■□□□□ 0.1
SNX27-202ENST00000368841 PSMB11A5LHX3 300 aa15.7■□□□□ 0.1
SNX27-202ENST00000368841 TMPRSS3P57727 454 aa15.7■□□□□ 0.1
SNX27-202ENST00000368841 OR4C45A6NMZ5 311 aa15.7■□□□□ 0.1
SNX27-202ENST00000368841 LDLRAD4O15165 306 aa15.7■□□□□ 0.1
SNX27-202ENST00000368841 LINC00869P0C866 280 aa15.7■□□□□ 0.1
SNX27-202ENST00000368841 GALP22466 123 aa15.7■□□□□ 0.1
SNX27-202ENST00000368841 CKS2P33552 79 aa15.7■□□□□ 0.1
SNX27-202ENST00000368841 ABLIM2Q6H8Q1 611 aa15.7■□□□□ 0.1
SNX27-202ENST00000368841 ATOH7Q8N100 152 aa15.7■□□□□ 0.1
SNX27-202ENST00000368841 ST6GALNAC2Q9UJ37 374 aa15.7■□□□□ 0.1
SNX27-202ENST00000368841 MUC21A0A0G2JKD1 596 aa15.69■□□□□ 0.1
SNX27-202ENST00000368841 MUC21A0A140T8X8 626 aa15.69■□□□□ 0.1
SNX27-202ENST00000368841 RPL27AP46776 148 aaKnown RBP15.69■□□□□ 0.1
SNX27-202ENST00000368841 MUC21Q5SSG8 566 aa15.69■□□□□ 0.1
SNX27-202ENST00000368841 ATG101Q9BSB4 218 aa15.69■□□□□ 0.1
SNX27-202ENST00000368841 MYO7AQ13402 2215 aa15.69■□□□□ 0.1
SNX27-202ENST00000368841 ADAMTSL3P82987 1691 aa15.69■□□□□ 0.1
SNX27-202ENST00000368841 TMEM127O75204 238 aa15.69■□□□□ 0.1
SNX27-202ENST00000368841 PF4P02776 101 aa15.69■□□□□ 0.1
SNX27-202ENST00000368841 EMP1P54849 157 aa15.69■□□□□ 0.1
SNX27-202ENST00000368841 PQLC2Q6ZP29 291 aa15.69■□□□□ 0.1
SNX27-202ENST00000368841 RARRES2Q99969 163 aa15.69■□□□□ 0.1
SNX27-202ENST00000368841 SELENOKQ9Y6D0 94 aa15.69■□□□□ 0.1
SNX27-202ENST00000368841 PPP1R17O96001 155 aa15.69■□□□□ 0.1
SNX27-202ENST00000368841 SYT8Q8NBV8 401 aa15.69■□□□□ 0.1
SNX27-202ENST00000368841 CENPVQ7Z7K6 275 aaPredicted RBP15.69■□□□□ 0.1
SNX27-202ENST00000368841 PGPA6NDG6 321 aa15.69■□□□□ 0.1
SNX27-202ENST00000368841 C1QL1O75973 258 aa15.69■□□□□ 0.1
SNX27-202ENST00000368841 CX3CL1P78423 397 aa15.69■□□□□ 0.1
SNX27-202ENST00000368841 NUDT16L1Q9BRJ7 211 aaKnown RBP15.69■□□□□ 0.1
SNX27-202ENST00000368841 HSPB7Q9UBY9 170 aa15.69■□□□□ 0.1
SNX27-202ENST00000368841 PLXNB2O15031 1838 aa15.69■□□□□ 0.1
SNX27-202ENST00000368841 ZNF56Q15929 161 aa15.69■□□□□ 0.1
SNX27-202ENST00000368841 SPATA45Q537H7 98 aa15.69■□□□□ 0.1
SNX27-202ENST00000368841 TMEM91Q6ZNR0 172 aa15.69■□□□□ 0.1
SNX27-202ENST00000368841 DDB2Q92466 427 aa15.69■□□□□ 0.1
SNX27-202ENST00000368841 CACNA1CQ13936 2221 aa15.69■□□□□ 0.1
SNX27-202ENST00000368841 C17orf51A8MQB3 221 aa15.68■□□□□ 0.1
SNX27-202ENST00000368841 ZNF658BQ4V348 819 aaPredicted RBP15.68■□□□□ 0.1
SNX27-202ENST00000368841 LSMEM1Q8N8F7 131 aa15.68■□□□□ 0.1
SNX27-202ENST00000368841 RNF133Q8WVZ7 376 aa15.68■□□□□ 0.1
SNX27-202ENST00000368841 PITPNC1Q9UKF7 332 aa15.68■□□□□ 0.1
SNX27-202ENST00000368841 C7orf71A4D174 169 aa15.68■□□□□ 0.1
SNX27-202ENST00000368841 A6NDN8 102 aa15.68■□□□□ 0.1
SNX27-202ENST00000368841 CTDSPLO15194 276 aa15.68■□□□□ 0.1
SNX27-202ENST00000368841 ATP5J2P56134 94 aa15.68■□□□□ 0.1
SNX27-202ENST00000368841 C2orf83Q53S99 150 aa15.68■□□□□ 0.1
SNX27-202ENST00000368841 SRXN1Q9BYN0 137 aa15.68■□□□□ 0.1
SNX27-202ENST00000368841 SF3B6Q9Y3B4 125 aaKnown RBP15.68■□□□□ 0.1
SNX27-202ENST00000368841 PHLDA3Q9Y5J5 127 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms