RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 GLRX2Q9NS18 164 aa9.04□□□□□ -0.96
TPM3-212ENST00000368533 Q9UFV3 132 aa9.04□□□□□ -0.96
TPM3-212ENST00000368533 MBD3L4A6NDZ8 208 aaPredicted RBP9.04□□□□□ -0.96
TPM3-212ENST00000368533 MBD3L3A6NE82 208 aaPredicted RBP9.04□□□□□ -0.96
TPM3-212ENST00000368533 CRYM-AS1A6NIL9 109 aa9.04□□□□□ -0.96
TPM3-212ENST00000368533 MBD3L5A6NJ08 208 aaPredicted RBP9.04□□□□□ -0.96
TPM3-212ENST00000368533 CGAP01215 116 aa9.04□□□□□ -0.96
TPM3-212ENST00000368533 NRN1LQ496H8 165 aa9.04□□□□□ -0.96
TPM3-212ENST00000368533 ZDHHC23Q8IYP9 409 aa9.04□□□□□ -0.96
TPM3-212ENST00000368533 MBD3L2Q8NHZ7 208 aaPredicted RBP9.04□□□□□ -0.96
TPM3-212ENST00000368533 C10orf35Q96D05 121 aa9.04□□□□□ -0.96
TPM3-212ENST00000368533 SLC35B3Q9H1N7 401 aa9.04□□□□□ -0.96
TPM3-212ENST00000368533 PLSCR4Q9NRQ2 329 aa9.04□□□□□ -0.96
TPM3-212ENST00000368533 HIVEP3Q5T1R4 2406 aa9.04□□□□□ -0.96
TPM3-212ENST00000368533 H3BQ15 152 aa9.03□□□□□ -0.96
TPM3-212ENST00000368533 PTBP3O95758 552 aaKnown RBP9.03□□□□□ -0.96
TPM3-212ENST00000368533 CST4P01036 141 aa9.03□□□□□ -0.96
TPM3-212ENST00000368533 OR4A8P0C604 315 aa9.03□□□□□ -0.96
TPM3-212ENST00000368533 ECI1P42126 302 aa9.03□□□□□ -0.96
TPM3-212ENST00000368533 TDGF1P3P51864 188 aa9.03□□□□□ -0.96
TPM3-212ENST00000368533 HMGN3Q15651 99 aa9.03□□□□□ -0.96
TPM3-212ENST00000368533 FBXW12Q6X9E4 464 aa9.03□□□□□ -0.96
TPM3-212ENST00000368533 SUMF2Q8NBJ7 301 aa9.03□□□□□ -0.96
TPM3-212ENST00000368533 ABHD14AQ9BUJ0 271 aa9.03□□□□□ -0.96
TPM3-212ENST00000368533 SLC25A31Q9H0C2 315 aa9.03□□□□□ -0.96
TPM3-212ENST00000368533 EPG5Q9HCE0 2579 aa9.03□□□□□ -0.96
TPM3-212ENST00000368533 TACC2O95359 2948 aa9.03□□□□□ -0.96
TPM3-212ENST00000368533 ANKRD30BLA7E2S9 258 aa9.03□□□□□ -0.96
TPM3-212ENST00000368533 TAAR5O14804 337 aa9.03□□□□□ -0.96
TPM3-212ENST00000368533 CHATP28329 748 aa9.03□□□□□ -0.96
TPM3-212ENST00000368533 UCP2P55851 309 aa9.03□□□□□ -0.96
TPM3-212ENST00000368533 UBE2KP61086 200 aa9.03□□□□□ -0.96
TPM3-212ENST00000368533 PSG7Q13046 419 aa9.03□□□□□ -0.96
TPM3-212ENST00000368533 TMEM268Q5VZI3 342 aa9.03□□□□□ -0.96
TPM3-212ENST00000368533 ZNF826PQ6ZT77 177 aa9.03□□□□□ -0.96
TPM3-212ENST00000368533 UBALD1Q8TB05 177 aa9.03□□□□□ -0.96
TPM3-212ENST00000368533 ZCCHC14Q8WYQ9 949 aaKnown RBP9.03□□□□□ -0.96
TPM3-212ENST00000368533 HIST1H2AAQ96QV6 131 aa9.03□□□□□ -0.96
TPM3-212ENST00000368533 GPHA2Q96T91 129 aa9.03□□□□□ -0.96
TPM3-212ENST00000368533 SYT3Q9BQG1 590 aa9.03□□□□□ -0.96
TPM3-212ENST00000368533 NAA60Q9H7X0 242 aa9.03□□□□□ -0.96
TPM3-212ENST00000368533 OBP2BQ9NPH6 170 aa9.03□□□□□ -0.96
TPM3-212ENST00000368533 SLC2A9Q9NRM0 540 aa9.03□□□□□ -0.96
TPM3-212ENST00000368533 CFAP46Q8IYW2 2715 aa9.03□□□□□ -0.96
TPM3-212ENST00000368533 TRAV39A0A0B4J263 110 aa9.02□□□□□ -0.96
TPM3-212ENST00000368533 IGHV1-18A0A0C4DH31 117 aa9.02□□□□□ -0.96
TPM3-212ENST00000368533 JTBO76095 146 aa9.02□□□□□ -0.96
TPM3-212ENST00000368533 OMGP23515 440 aa9.02□□□□□ -0.96
TPM3-212ENST00000368533 FUT6P51993 359 aa9.02□□□□□ -0.96
TPM3-212ENST00000368533 BATFQ16520 125 aa9.02□□□□□ -0.96
TPM3-212ENST00000368533 CLEC12BQ2HXU8 276 aa9.02□□□□□ -0.96
TPM3-212ENST00000368533 LBHQ53QV2 105 aaPredicted RBP9.02□□□□□ -0.96
TPM3-212ENST00000368533 FAM213BQ8TBF2 198 aa9.02□□□□□ -0.96
TPM3-212ENST00000368533 SPOCK3Q9BQ16 436 aa9.02□□□□□ -0.96
TPM3-212ENST00000368533 DEDDO75618 318 aa9.02□□□□□ -0.97
TPM3-212ENST00000368533 NXPH3O95157 252 aa9.02□□□□□ -0.97
TPM3-212ENST00000368533 RPL29P47914 159 aaKnown RBP9.02□□□□□ -0.97
TPM3-212ENST00000368533 DLK1P80370 383 aa9.02□□□□□ -0.97
TPM3-212ENST00000368533 ETFRF1Q6IPR1 90 aa9.02□□□□□ -0.97
TPM3-212ENST00000368533 BTNL3Q6UXE8 466 aa9.02□□□□□ -0.97
TPM3-212ENST00000368533 WFDC8Q8IUA0 241 aa9.02□□□□□ -0.97
TPM3-212ENST00000368533 KLF14Q8TD94 323 aaPredicted RBP9.02□□□□□ -0.97
TPM3-212ENST00000368533 SPSB4Q96A44 273 aa9.02□□□□□ -0.97
TPM3-212ENST00000368533 UBE2J1Q9Y385 318 aaPredicted RBP9.02□□□□□ -0.97
TPM3-212ENST00000368533 SVEP1Q4LDE5 3571 aa9.02□□□□□ -0.97
TPM3-212ENST00000368533 MAP1AP78559 2803 aaPredicted RBP9.02□□□□□ -0.97
TPM3-212ENST00000368533 BORCS7-ASMTA0A0B4J1R7 106 aa9.02□□□□□ -0.97
TPM3-212ENST00000368533 HS3ST1O14792 307 aa9.02□□□□□ -0.97
TPM3-212ENST00000368533 MSTNO14793 375 aa9.02□□□□□ -0.97
TPM3-212ENST00000368533 PDCD6O75340 191 aa9.02□□□□□ -0.97
TPM3-212ENST00000368533 COX5AP20674 150 aa9.02□□□□□ -0.97
TPM3-212ENST00000368533 AADACP22760 399 aa9.02□□□□□ -0.97
TPM3-212ENST00000368533 ZNF324BQ6AW86 544 aaPredicted RBP9.02□□□□□ -0.97
TPM3-212ENST00000368533 GP6Q9HCN6 339 aa9.02□□□□□ -0.97
TPM3-212ENST00000368533 MTCH1Q9NZJ7 389 aa9.02□□□□□ -0.97
TPM3-212ENST00000368533 ANKHD1Q8IWZ3 2542 aaKnown RBP9.01□□□□□ -0.97
TPM3-212ENST00000368533 CDIPTO14735 213 aa9.01□□□□□ -0.97
TPM3-212ENST00000368533 DLEU1O43261 78 aa9.01□□□□□ -0.97
TPM3-212ENST00000368533 CA11O75493 328 aa9.01□□□□□ -0.97
TPM3-212ENST00000368533 FUT3P21217 361 aa9.01□□□□□ -0.97
TPM3-212ENST00000368533 FGF7P21781 194 aa9.01□□□□□ -0.97
TPM3-212ENST00000368533 CEBPDP49716 269 aaPredicted RBP9.01□□□□□ -0.97
TPM3-212ENST00000368533 BPIFB3P59826 476 aa9.01□□□□□ -0.97
TPM3-212ENST00000368533 IL15RAQ13261 267 aa9.01□□□□□ -0.97
TPM3-212ENST00000368533 MSMPQ1L6U9 139 aa9.01□□□□□ -0.97
TPM3-212ENST00000368533 KRTCAP3Q53RY4 240 aa9.01□□□□□ -0.97
TPM3-212ENST00000368533 TMEM42Q69YG0 159 aa9.01□□□□□ -0.97
TPM3-212ENST00000368533 TMEM182Q6ZP80 229 aaPredicted RBP9.01□□□□□ -0.97
TPM3-212ENST00000368533 LGI3Q8N145 548 aa9.01□□□□□ -0.97
TPM3-212ENST00000368533 OR52M1Q8NGK5 317 aa9.01□□□□□ -0.97
TPM3-212ENST00000368533 C19orf12Q9NSK7 152 aa9.01□□□□□ -0.97
TPM3-212ENST00000368533 E5RGE8 158 aa9.01□□□□□ -0.97
TPM3-212ENST00000368533 TIMM8AO60220 97 aaPredicted RBP9.01□□□□□ -0.97
TPM3-212ENST00000368533 AMBPP02760 352 aa9.01□□□□□ -0.97
TPM3-212ENST00000368533 LYL1P12980 280 aa9.01□□□□□ -0.97
TPM3-212ENST00000368533 DTYMKP23919 212 aa9.01□□□□□ -0.97
TPM3-212ENST00000368533 MRPL49Q13405 166 aaKnown RBP9.01□□□□□ -0.97
TPM3-212ENST00000368533 GNMTQ14749 295 aa9.01□□□□□ -0.97
TPM3-212ENST00000368533 PRAMEF6Q5VXH4 476 aa9.01□□□□□ -0.97
TPM3-212ENST00000368533 ZNF880Q6PDB4 577 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms