RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 GAGE12FP0CL80 117 aa7.56□□□□□ -1.2
SYNE1-206ENST00000367253 GAGE12GP0CL81 117 aa7.56□□□□□ -1.2
SYNE1-206ENST00000367253 GAGE12IP0CL82 117 aa7.56□□□□□ -1.2
SYNE1-206ENST00000367253 FUT6P51993 359 aa7.56□□□□□ -1.2
SYNE1-206ENST00000367253 ERVS71-1P61550 626 aa7.56□□□□□ -1.2
SYNE1-206ENST00000367253 GAGE4Q13068 117 aa7.56□□□□□ -1.2
SYNE1-206ENST00000367253 LINC00303Q3SY05 128 aa7.56□□□□□ -1.2
SYNE1-206ENST00000367253 MRM1Q6IN84 353 aaKnown RBP7.56□□□□□ -1.2
SYNE1-206ENST00000367253 OR52B4Q8NGK2 314 aa7.56□□□□□ -1.2
SYNE1-206ENST00000367253 NT5CQ8TCD5 201 aa7.56□□□□□ -1.2
SYNE1-206ENST00000367253 SLX1AQ9BQ83 275 aa7.56□□□□□ -1.2
SYNE1-206ENST00000367253 ZNFX1Q9P2E3 1918 aaKnown RBP7.56□□□□□ -1.2
SYNE1-206ENST00000367253 TCRBV4S1A1TA0A5B7 111 aa7.56□□□□□ -1.2
SYNE1-206ENST00000367253 PSCAO43653 123 aa7.56□□□□□ -1.2
SYNE1-206ENST00000367253 CST7O76096 145 aa7.56□□□□□ -1.2
SYNE1-206ENST00000367253 MELTFP08582 738 aa7.56□□□□□ -1.2
SYNE1-206ENST00000367253 COX6CP09669 75 aa7.56□□□□□ -1.2
SYNE1-206ENST00000367253 ERVK11-1P61568 191 aa7.56□□□□□ -1.2
SYNE1-206ENST00000367253 PAQR6Q6TCH4 344 aa7.56□□□□□ -1.2
SYNE1-206ENST00000367253 OVCH2Q7RTZ1 564 aa7.56□□□□□ -1.2
SYNE1-206ENST00000367253 OR1F12Q8NHA8 337 aa7.56□□□□□ -1.2
SYNE1-206ENST00000367253 NUDCD2Q8WVJ2 157 aa7.56□□□□□ -1.2
SYNE1-206ENST00000367253 WDR13Q9H1Z4 485 aa7.56□□□□□ -1.2
SYNE1-206ENST00000367253 TAS2R4Q9NYW5 299 aa7.56□□□□□ -1.2
SYNE1-206ENST00000367253 A0A1B0GWA3 101 aa7.56□□□□□ -1.2
SYNE1-206ENST00000367253 A6NJY4 79 aa7.56□□□□□ -1.2
SYNE1-206ENST00000367253 C1QTNF9BB2RNN3 333 aa7.56□□□□□ -1.2
SYNE1-206ENST00000367253 TMEM262E9PQX1 116 aa7.56□□□□□ -1.2
SYNE1-206ENST00000367253 LANCL1O43813 399 aa7.56□□□□□ -1.2
SYNE1-206ENST00000367253 DXOO77932 396 aaKnown RBP7.56□□□□□ -1.2
SYNE1-206ENST00000367253 VDAC2P45880 294 aaPredicted RBP7.56□□□□□ -1.2
SYNE1-206ENST00000367253 SLCO4C1Q6ZQN7 724 aa7.56□□□□□ -1.2
SYNE1-206ENST00000367253 YIPF6Q96EC8 236 aa7.56□□□□□ -1.2
SYNE1-206ENST00000367253 GUCD1Q96NT3 240 aa7.56□□□□□ -1.2
SYNE1-206ENST00000367253 NAT8Q9UHE5 227 aa7.56□□□□□ -1.2
SYNE1-206ENST00000367253 MOB4Q9Y3A3 225 aa7.56□□□□□ -1.2
SYNE1-206ENST00000367253 UBE2L5PA0A1B0GUS4 154 aa7.55□□□□□ -1.2
SYNE1-206ENST00000367253 LOC107986453A0A1B0GWG9 222 aa7.55□□□□□ -1.2
SYNE1-206ENST00000367253 FCGR3BO75015 233 aa7.55□□□□□ -1.2
SYNE1-206ENST00000367253 DUS4LO95620 317 aaKnown RBP7.55□□□□□ -1.2
SYNE1-206ENST00000367253 MDKP21741 143 aaPredicted RBP7.55□□□□□ -1.2
SYNE1-206ENST00000367253 LCN2P80188 198 aa7.55□□□□□ -1.2
SYNE1-206ENST00000367253 TBR1Q16650 682 aa7.55□□□□□ -1.2
SYNE1-206ENST00000367253 NRIP2Q9BQI9 281 aa7.55□□□□□ -1.2
SYNE1-206ENST00000367253 AUNIPQ9H7T9 357 aa7.55□□□□□ -1.2
SYNE1-206ENST00000367253 GAPDHP04406 335 aaKnown RBP7.55□□□□□ -1.2
SYNE1-206ENST00000367253 GPR183P32249 361 aa7.55□□□□□ -1.2
SYNE1-206ENST00000367253 FUT7Q11130 342 aa7.55□□□□□ -1.2
SYNE1-206ENST00000367253 ECSCRQ19T08 205 aa7.55□□□□□ -1.2
SYNE1-206ENST00000367253 SYS1Q8N2H4 156 aa7.55□□□□□ -1.2
SYNE1-206ENST00000367253 ARRDC1Q8N5I2 433 aa7.55□□□□□ -1.2
SYNE1-206ENST00000367253 NPWQ8N729 165 aa7.55□□□□□ -1.2
SYNE1-206ENST00000367253 RNASEH2CQ8TDP1 164 aaKnown RBP7.55□□□□□ -1.2
SYNE1-206ENST00000367253 TMEM70Q9BUB7 260 aa7.55□□□□□ -1.2
SYNE1-206ENST00000367253 CST9LQ9H4G1 147 aa7.55□□□□□ -1.2
SYNE1-206ENST00000367253 TMEM38AQ9H6F2 299 aa7.55□□□□□ -1.2
SYNE1-206ENST00000367253 SRD5A3Q9H8P0 318 aa7.55□□□□□ -1.2
SYNE1-206ENST00000367253 H3BTX0 84 aa7.55□□□□□ -1.2
SYNE1-206ENST00000367253 HOXA3O43365 443 aaPredicted RBP7.55□□□□□ -1.2
SYNE1-206ENST00000367253 PTGER1P34995 402 aa7.55□□□□□ -1.2
SYNE1-206ENST00000367253 NBL1P41271 181 aa7.55□□□□□ -1.2
SYNE1-206ENST00000367253 FOXF1Q12946 379 aa7.55□□□□□ -1.2
SYNE1-206ENST00000367253 LYG1Q8N1E2 194 aa7.55□□□□□ -1.2
SYNE1-206ENST00000367253 DUSP18Q8NEJ0 188 aa7.55□□□□□ -1.2
SYNE1-206ENST00000367253 ALKBH3Q96Q83 286 aaPredicted RBP7.55□□□□□ -1.2
SYNE1-206ENST00000367253 PARLQ9H300 379 aa7.55□□□□□ -1.2
SYNE1-206ENST00000367253 FNDC4Q9H6D8 234 aaPredicted RBP7.55□□□□□ -1.2
SYNE1-206ENST00000367253 A4GALTQ9NPC4 353 aa7.55□□□□□ -1.2
SYNE1-206ENST00000367253 CABIN1Q9Y6J0 2220 aa7.55□□□□□ -1.2
SYNE1-206ENST00000367253 IGHV5-51A0A0C4DH38 117 aa7.55□□□□□ -1.2
SYNE1-206ENST00000367253 H3BUT2 72 aa7.55□□□□□ -1.2
SYNE1-206ENST00000367253 PYCARD-AS1I3L0S3 204 aa7.55□□□□□ -1.2
SYNE1-206ENST00000367253 K7ESF4 209 aa7.55□□□□□ -1.2
SYNE1-206ENST00000367253 RAMP3O60896 148 aa7.55□□□□□ -1.2
SYNE1-206ENST00000367253 OR2A4O95047 310 aa7.55□□□□□ -1.2
SYNE1-206ENST00000367253 IGF2P01344 180 aa7.55□□□□□ -1.2
SYNE1-206ENST00000367253 CD68P34810 354 aaPredicted RBP7.55□□□□□ -1.2
SYNE1-206ENST00000367253 DNLZQ5SXM8 178 aa7.55□□□□□ -1.2
SYNE1-206ENST00000367253 Q6ZNB5 142 aa7.55□□□□□ -1.2
SYNE1-206ENST00000367253 TMEM183AQ8IXX5 376 aa7.55□□□□□ -1.2
SYNE1-206ENST00000367253 MS4A6EQ96DS6 147 aa7.55□□□□□ -1.2
SYNE1-206ENST00000367253 OR2A7Q96R45 310 aa7.55□□□□□ -1.2
SYNE1-206ENST00000367253 TTTY12Q9BZ98 90 aa7.55□□□□□ -1.2
SYNE1-206ENST00000367253 HMSDA8MTL9 139 aa7.54□□□□□ -1.2
SYNE1-206ENST00000367253 H3BP45 60 aa7.54□□□□□ -1.2
SYNE1-206ENST00000367253 UBE2L6O14933 153 aa7.54□□□□□ -1.2
SYNE1-206ENST00000367253 GLRX5Q86SX6 157 aa7.54□□□□□ -1.2
SYNE1-206ENST00000367253 TMEM229BQ8NBD8 167 aa7.54□□□□□ -1.2
SYNE1-206ENST00000367253 C16orf52Q8NHV5 167 aa7.54□□□□□ -1.2
SYNE1-206ENST00000367253 FBXL15Q9H469 300 aa7.54□□□□□ -1.2
SYNE1-206ENST00000367253 KLK13Q9UKR3 277 aa7.54□□□□□ -1.2
SYNE1-206ENST00000367253 SPTBN2O15020 2390 aa7.54□□□□□ -1.2
SYNE1-206ENST00000367253 C3orf80F5H4A9 247 aa7.54□□□□□ -1.2
SYNE1-206ENST00000367253 THY1P04216 161 aa7.54□□□□□ -1.2
SYNE1-206ENST00000367253 GPX2P18283 190 aa7.54□□□□□ -1.2
SYNE1-206ENST00000367253 BCL3P20749 454 aa7.54□□□□□ -1.2
SYNE1-206ENST00000367253 CDKN1BP46527 198 aa7.54□□□□□ -1.2
SYNE1-206ENST00000367253 LSM11P83369 360 aaKnown RBP eCLIP7.54□□□□□ -1.2
SYNE1-206ENST00000367253 ZNF816Q0VGE8 651 aaPredicted RBP7.54□□□□□ -1.2
SYNE1-206ENST00000367253 TGIF1Q15583 401 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms