RNA–Protein interactions for RNA: ENST00000360228.10

CACNA1A-201, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-201ENST00000360228 OR8B12Q8NGG6 310 aa15.2■□□□□ 0.02
CACNA1A-201ENST00000360228 CACNA1HO95180 2353 aa15.2■□□□□ 0.02
CACNA1A-201ENST00000360228 J3QR06 171 aa15.2■□□□□ 0.02
CACNA1A-201ENST00000360228 NEU3Q9UQ49 428 aa15.2■□□□□ 0.02
CACNA1A-201ENST00000360228 FTH1P19P0C7X4 201 aa15.2■□□□□ 0.02
CACNA1A-201ENST00000360228 NPFFR1Q9GZQ6 430 aa15.2■□□□□ 0.02
CACNA1A-201ENST00000360228 PRR14LQ5THK1 2151 aa15.2■□□□□ 0.02
CACNA1A-201ENST00000360228 IGLV3-10A0A075B6K4 115 aa15.2■□□□□ 0.02
CACNA1A-201ENST00000360228 NPFFO15130 113 aa15.2■□□□□ 0.02
CACNA1A-201ENST00000360228 DEFB123Q8N688 67 aa15.2■□□□□ 0.02
CACNA1A-201ENST00000360228 ADAD2Q8NCV1 583 aaKnown RBP15.2■□□□□ 0.02
CACNA1A-201ENST00000360228 SLC25A20O43772 301 aa15.19■□□□□ 0.02
CACNA1A-201ENST00000360228 SYNGR1O43759 233 aa15.19■□□□□ 0.02
CACNA1A-201ENST00000360228 AICDAQ9GZX7 198 aa15.19■□□□□ 0.02
CACNA1A-201ENST00000360228 TMEM56-RWDD3S4R434 201 aa15.19■□□□□ 0.02
CACNA1A-201ENST00000360228 RGPD3A6NKT7 1758 aaPredicted RBP15.19■□□□□ 0.02
CACNA1A-201ENST00000360228 USF3Q68DE3 2245 aa15.19■□□□□ 0.02
CACNA1A-201ENST00000360228 PRRT4C9JH25 899 aa15.19■□□□□ 0.02
CACNA1A-201ENST00000360228 RND1Q92730 232 aa15.19■□□□□ 0.02
CACNA1A-201ENST00000360228 LINC00470Q9BZP3 86 aa15.19■□□□□ 0.02
CACNA1A-201ENST00000360228 MBNL2Q5VZF2 373 aaKnown RBP15.19■□□□□ 0.02
CACNA1A-201ENST00000360228 LHFPL4Q7Z7J7 247 aa15.19■□□□□ 0.02
CACNA1A-201ENST00000360228 PLXNA1Q9UIW2 1896 aa15.19■□□□□ 0.02
CACNA1A-201ENST00000360228 PITX3O75364 302 aa15.19■□□□□ 0.02
CACNA1A-201ENST00000360228 SLIRPQ9GZT3 109 aaKnown RBP15.19■□□□□ 0.02
CACNA1A-201ENST00000360228 ATOH7Q8N100 152 aa15.19■□□□□ 0.02
CACNA1A-201ENST00000360228 CYB561D1Q8N8Q1 229 aa15.19■□□□□ 0.02
CACNA1A-201ENST00000360228 OR1P1Q8NH06 330 aa15.19■□□□□ 0.02
CACNA1A-201ENST00000360228 MARVELD3Q96A59 401 aa15.19■□□□□ 0.02
CACNA1A-201ENST00000360228 MS4A7Q9GZW8 240 aaPredicted RBP15.19■□□□□ 0.02
CACNA1A-201ENST00000360228 RNF122Q9H9V4 155 aa15.19■□□□□ 0.02
CACNA1A-201ENST00000360228 HAX1O00165 279 aa15.18■□□□□ 0.02
CACNA1A-201ENST00000360228 ZFAND6Q6FIF0 208 aa15.18■□□□□ 0.02
CACNA1A-201ENST00000360228 ROS1P08922 2347 aa15.18■□□□□ 0.02
CACNA1A-201ENST00000360228 FGF9P31371 208 aaPredicted RBP15.18■□□□□ 0.02
CACNA1A-201ENST00000360228 MAJINQ3KP22 176 aa15.18■□□□□ 0.02
CACNA1A-201ENST00000360228 PAQR9Q6ZVX9 377 aa15.18■□□□□ 0.02
CACNA1A-201ENST00000360228 OR4D5Q8NGN0 318 aa15.18■□□□□ 0.02
CACNA1A-201ENST00000360228 MRGPRX3Q96LB0 322 aa15.18■□□□□ 0.02
CACNA1A-201ENST00000360228 A0A0B4J2E0 115 aa15.18■□□□□ 0.02
CACNA1A-201ENST00000360228 A0A1B0GX12 115 aa15.18■□□□□ 0.02
CACNA1A-201ENST00000360228 HMX2A2RU54 273 aa15.18■□□□□ 0.02
CACNA1A-201ENST00000360228 CEACAM18A8MTB9 384 aa15.18■□□□□ 0.02
CACNA1A-201ENST00000360228 MRPL30Q8TCC3 161 aaKnown RBP15.18■□□□□ 0.02
CACNA1A-201ENST00000360228 RARRES2Q99969 163 aa15.18■□□□□ 0.02
CACNA1A-201ENST00000360228 PRSS27Q9BQR3 290 aa15.18■□□□□ 0.02
CACNA1A-201ENST00000360228 SIGLEC7Q9Y286 467 aa15.18■□□□□ 0.02
CACNA1A-201ENST00000360228 PSG2P11465 335 aa15.18■□□□□ 0.02
CACNA1A-201ENST00000360228 PRDX2P32119 198 aa15.18■□□□□ 0.02
CACNA1A-201ENST00000360228 TMEM50BP56557 158 aa15.18■□□□□ 0.02
CACNA1A-201ENST00000360228 PHLDA1Q8WV24 401 aaPredicted RBP15.18■□□□□ 0.02
CACNA1A-201ENST00000360228 NRAPQ86VF7 1730 aa15.18■□□□□ 0.02
CACNA1A-201ENST00000360228 IL11RAQ14626 422 aa15.18■□□□□ 0.02
CACNA1A-201ENST00000360228 PAPPA-AS1Q5QFB9 102 aa15.18■□□□□ 0.02
CACNA1A-201ENST00000360228 DNASE2BQ8WZ79 361 aa15.18■□□□□ 0.02
CACNA1A-201ENST00000360228 GPR82Q96P67 336 aa15.18■□□□□ 0.02
CACNA1A-201ENST00000360228 MGST2Q99735 147 aa15.18■□□□□ 0.02
CACNA1A-201ENST00000360228 CTXND1A0A1B0GTU2 59 aa15.18■□□□□ 0.02
CACNA1A-201ENST00000360228 A1L4Q6 167 aa15.18■□□□□ 0.02
CACNA1A-201ENST00000360228 LINC00862A6NCI5 91 aa15.18■□□□□ 0.02
CACNA1A-201ENST00000360228 AMY1AP04745 511 aa15.18■□□□□ 0.02
CACNA1A-201ENST00000360228 PATE4P0C8F1 98 aa15.18■□□□□ 0.02
CACNA1A-201ENST00000360228 MGAT2Q10469 447 aa15.18■□□□□ 0.02
CACNA1A-201ENST00000360228 ZNF345Q14585 488 aa15.18■□□□□ 0.02
CACNA1A-201ENST00000360228 TCF23Q7RTU1 214 aa15.18■□□□□ 0.02
CACNA1A-201ENST00000360228 NT5CQ8TCD5 201 aa15.18■□□□□ 0.02
CACNA1A-201ENST00000360228 PLPP3O14495 311 aa15.17■□□□□ 0.02
CACNA1A-201ENST00000360228 MPZL1O95297 269 aa15.17■□□□□ 0.02
CACNA1A-201ENST00000360228 CTSDP07339 412 aaPredicted RBP15.17■□□□□ 0.02
CACNA1A-201ENST00000360228 GALNT14Q96FL9 552 aa15.17■□□□□ 0.02
CACNA1A-201ENST00000360228 TMEM160Q9NX00 188 aa15.17■□□□□ 0.02
CACNA1A-201ENST00000360228 ID4P47928 161 aa15.17■□□□□ 0.02
CACNA1A-201ENST00000360228 PIGYQ3MUY2 71 aa15.17■□□□□ 0.02
CACNA1A-201ENST00000360228 PPYP01298 95 aa15.17■□□□□ 0.02
CACNA1A-201ENST00000360228 KIR2DL4Q99706 377 aa15.17■□□□□ 0.02
CACNA1A-201ENST00000360228 SSBP4Q9BWG4 385 aaPredicted RBP15.17■□□□□ 0.02
CACNA1A-201ENST00000360228 SLC25A10Q9UBX3 287 aaPredicted RBP15.17■□□□□ 0.02
CACNA1A-201ENST00000360228 A0A1B0GTH9 108 aa15.17■□□□□ 0.02
CACNA1A-201ENST00000360228 HYPMO75409 117 aa15.17■□□□□ 0.02
CACNA1A-201ENST00000360228 ELF5Q9UKW6 265 aaPredicted RBP15.17■□□□□ 0.02
CACNA1A-201ENST00000360228 MDP1Q86V88 176 aa15.17■□□□□ 0.02
CACNA1A-201ENST00000360228 ASB1Q9Y576 335 aa15.17■□□□□ 0.02
CACNA1A-201ENST00000360228 EWSR1Q01844 656 aaKnown RBP eCLIP15.17■□□□□ 0.02
CACNA1A-201ENST00000360228 A0A1W2PS18 150 aa15.17■□□□□ 0.02
CACNA1A-201ENST00000360228 RCC2Q9P258 522 aaKnown RBP15.17■□□□□ 0.02
CACNA1A-201ENST00000360228 COL16A1Q07092 1604 aaPredicted RBP15.17■□□□□ 0.02
CACNA1A-201ENST00000360228 ANKRD20A5PA0PJZ0 165 aa15.16■□□□□ 0.02
CACNA1A-201ENST00000360228 NKX2-6A6NCS4 301 aa15.16■□□□□ 0.02
CACNA1A-201ENST00000360228 CDIPTO14735 213 aa15.16■□□□□ 0.02
CACNA1A-201ENST00000360228 LDLRAD4O15165 306 aa15.16■□□□□ 0.02
CACNA1A-201ENST00000360228 TCF24Q7RTU0 167 aa15.16■□□□□ 0.02
CACNA1A-201ENST00000360228 HILPDAQ9Y5L2 63 aa15.16■□□□□ 0.02
CACNA1A-201ENST00000360228 S1PR2O95136 353 aa15.16■□□□□ 0.02
CACNA1A-201ENST00000360228 SSPNQ14714 243 aa15.16■□□□□ 0.02
CACNA1A-201ENST00000360228 ZNF770Q6IQ21 691 aaPredicted RBP15.16■□□□□ 0.02
CACNA1A-201ENST00000360228 CCDC144NLQ6NUI1 221 aa15.16■□□□□ 0.02
CACNA1A-201ENST00000360228 MDKP21741 143 aaPredicted RBP15.16■□□□□ 0.02
CACNA1A-201ENST00000360228 GALNSP34059 522 aa15.16■□□□□ 0.02
CACNA1A-201ENST00000360228 PHF7Q9BWX1 381 aaPredicted RBP15.16■□□□□ 0.02
CACNA1A-201ENST00000360228 SLC52A3Q9NQ40 469 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms