RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 TMEM210A6NLX4 147 aa9.48□□□□□ -0.89
SSU72-202ENST00000359060 PRRG2O14669 202 aa9.48□□□□□ -0.89
SSU72-202ENST00000359060 FBP1P09467 338 aa9.48□□□□□ -0.89
SSU72-202ENST00000359060 CECR9P0C854 216 aa9.48□□□□□ -0.89
SSU72-202ENST00000359060 NQO2P16083 231 aa9.48□□□□□ -0.89
SSU72-202ENST00000359060 HERPUD1Q15011 391 aa9.48□□□□□ -0.89
SSU72-202ENST00000359060 POM121Q96HA1 1249 aa9.48□□□□□ -0.89
SSU72-202ENST00000359060 GINS3Q9BRX5 216 aa9.48□□□□□ -0.89
SSU72-202ENST00000359060 DYNLRB1Q9NP97 96 aa9.48□□□□□ -0.89
SSU72-202ENST00000359060 CARHSP1Q9Y2V2 147 aaKnown RBP9.48□□□□□ -0.89
SSU72-202ENST00000359060 COL4A2P08572 1712 aa9.48□□□□□ -0.89
SSU72-202ENST00000359060 SOX15O60248 233 aa9.48□□□□□ -0.89
SSU72-202ENST00000359060 ADCYAP1P18509 176 aa9.48□□□□□ -0.89
SSU72-202ENST00000359060 TAS2R30P59541 319 aa9.48□□□□□ -0.89
SSU72-202ENST00000359060 RPP30P78346 268 aaKnown RBP9.48□□□□□ -0.89
SSU72-202ENST00000359060 NKX6-1P78426 367 aaPredicted RBP9.48□□□□□ -0.89
SSU72-202ENST00000359060 ZNF561Q8N587 486 aa9.48□□□□□ -0.89
SSU72-202ENST00000359060 LRTM2Q8N967 370 aa9.48□□□□□ -0.89
SSU72-202ENST00000359060 NECAP1Q8NC96 275 aa9.48□□□□□ -0.89
SSU72-202ENST00000359060 TVP23CQ96ET8 276 aa9.48□□□□□ -0.89
SSU72-202ENST00000359060 TMEM56Q96MV1 263 aa9.48□□□□□ -0.89
SSU72-202ENST00000359060 TAAR6Q96RI8 345 aa9.48□□□□□ -0.89
SSU72-202ENST00000359060 SMIM7Q9BQ49 75 aa9.48□□□□□ -0.89
SSU72-202ENST00000359060 DCTN5Q9BTE1 182 aa9.48□□□□□ -0.89
SSU72-202ENST00000359060 TMEM56-RWDD3S4R434 201 aa9.48□□□□□ -0.89
SSU72-202ENST00000359060 MED12LQ86YW9 2145 aa9.48□□□□□ -0.89
SSU72-202ENST00000359060 MT-ND4LP03901 98 aa9.48□□□□□ -0.89
SSU72-202ENST00000359060 GNG10P50151 68 aa9.48□□□□□ -0.89
SSU72-202ENST00000359060 PDZD11Q5EBL8 140 aa9.48□□□□□ -0.89
SSU72-202ENST00000359060 H1FOOQ8IZA3 346 aaPredicted RBP9.48□□□□□ -0.89
SSU72-202ENST00000359060 CYB561D1Q8N8Q1 229 aa9.48□□□□□ -0.89
SSU72-202ENST00000359060 OR4F5Q8NH21 305 aa9.48□□□□□ -0.89
SSU72-202ENST00000359060 OR4F4Q96R69 305 aa9.48□□□□□ -0.89
SSU72-202ENST00000359060 RAB9BQ9NP90 201 aa9.48□□□□□ -0.89
SSU72-202ENST00000359060 ZNF71Q9NQZ8 489 aaPredicted RBP9.48□□□□□ -0.89
SSU72-202ENST00000359060 C17orf112F2Z3M2 114 aa9.47□□□□□ -0.89
SSU72-202ENST00000359060 MKRN2OSH3BPM6 223 aa9.47□□□□□ -0.89
SSU72-202ENST00000359060 PRDX2P32119 198 aa9.47□□□□□ -0.89
SSU72-202ENST00000359060 HOXA4Q00056 320 aaPredicted RBP9.47□□□□□ -0.89
SSU72-202ENST00000359060 C4orf17Q53FE4 359 aa9.47□□□□□ -0.89
SSU72-202ENST00000359060 CRIP3Q6Q6R5 217 aa9.47□□□□□ -0.89
SSU72-202ENST00000359060 OR4D5Q8NGN0 318 aa9.47□□□□□ -0.89
SSU72-202ENST00000359060 C12orf77C9JDV5 145 aa9.47□□□□□ -0.89
SSU72-202ENST00000359060 H3BQ15 152 aa9.47□□□□□ -0.89
SSU72-202ENST00000359060 RND3P61587 244 aa9.47□□□□□ -0.89
SSU72-202ENST00000359060 FOXF2Q12947 444 aa9.47□□□□□ -0.89
SSU72-202ENST00000359060 RAB31Q13636 194 aa9.47□□□□□ -0.89
SSU72-202ENST00000359060 DTD1Q8TEA8 209 aa9.47□□□□□ -0.89
SSU72-202ENST00000359060 CIB3Q96Q77 187 aaPredicted RBP9.47□□□□□ -0.89
SSU72-202ENST00000359060 ZNF665Q9H7R5 613 aa9.47□□□□□ -0.89
SSU72-202ENST00000359060 IGKV1-6A0A0C4DH72 117 aa9.47□□□□□ -0.89
SSU72-202ENST00000359060 LYL1P12980 280 aa9.47□□□□□ -0.89
SSU72-202ENST00000359060 UBE2G2P60604 165 aa9.47□□□□□ -0.89
SSU72-202ENST00000359060 MST1LQ2TV78 715 aa9.47□□□□□ -0.89
SSU72-202ENST00000359060 FFAR4Q5NUL3 377 aa9.47□□□□□ -0.89
SSU72-202ENST00000359060 LYG1Q8N1E2 194 aa9.47□□□□□ -0.89
SSU72-202ENST00000359060 PINX1Q96BK5 328 aaKnown RBP9.47□□□□□ -0.89
SSU72-202ENST00000359060 LAMP3Q9UQV4 416 aa9.47□□□□□ -0.89
SSU72-202ENST00000359060 CTRB1P17538 263 aa9.46□□□□□ -0.89
SSU72-202ENST00000359060 COX5AP20674 150 aa9.46□□□□□ -0.89
SSU72-202ENST00000359060 RPS23P62266 143 aaKnown RBP9.46□□□□□ -0.89
SSU72-202ENST00000359060 CTRB2Q6GPI1 263 aa9.46□□□□□ -0.89
SSU72-202ENST00000359060 C15orf54Q8N8G6 183 aa9.46□□□□□ -0.89
SSU72-202ENST00000359060 ARV1Q9H2C2 271 aa9.46□□□□□ -0.89
SSU72-202ENST00000359060 CYB5BO43169 146 aa9.46□□□□□ -0.89
SSU72-202ENST00000359060 OPN1MWP04001 364 aa9.46□□□□□ -0.89
SSU72-202ENST00000359060 OPN1MW2P0DN77 364 aa9.46□□□□□ -0.89
SSU72-202ENST00000359060 OPN1MW3P0DN78 364 aa9.46□□□□□ -0.89
SSU72-202ENST00000359060 OR2V2Q96R30 315 aa9.46□□□□□ -0.89
SSU72-202ENST00000359060 OR4C12Q96R67 309 aa9.46□□□□□ -0.89
SSU72-202ENST00000359060 KIAA1456Q9P272 454 aa9.46□□□□□ -0.89
SSU72-202ENST00000359060 WIPI2Q9Y4P8 454 aa9.46□□□□□ -0.89
SSU72-202ENST00000359060 CUL9Q8IWT3 2517 aa9.46□□□□□ -0.9
SSU72-202ENST00000359060 MUC6Q6W4X9 2439 aa9.46□□□□□ -0.9
SSU72-202ENST00000359060 S1PR2O95136 353 aa9.46□□□□□ -0.9
SSU72-202ENST00000359060 PGA5P0DJD9 388 aa9.46□□□□□ -0.9
SSU72-202ENST00000359060 CD200P41217 278 aa9.46□□□□□ -0.9
SSU72-202ENST00000359060 DHRS7BQ6IAN0 325 aaPredicted RBP9.46□□□□□ -0.9
SSU72-202ENST00000359060 R3HDM4Q96D70 268 aa9.46□□□□□ -0.9
SSU72-202ENST00000359060 ACTR3CQ9C0K3 210 aaPredicted RBP9.46□□□□□ -0.9
SSU72-202ENST00000359060 GP6Q9HCN6 339 aa9.46□□□□□ -0.9
SSU72-202ENST00000359060 GCM1Q9NP62 436 aa9.46□□□□□ -0.9
SSU72-202ENST00000359060 TNFAIP6P98066 277 aaPredicted RBP9.45□□□□□ -0.9
SSU72-202ENST00000359060 ZNF324BQ6AW86 544 aaPredicted RBP9.45□□□□□ -0.9
SSU72-202ENST00000359060 FGF23Q9GZV9 251 aaPredicted RBP9.45□□□□□ -0.9
SSU72-202ENST00000359060 NIT2Q9NQR4 276 aa9.45□□□□□ -0.9
SSU72-202ENST00000359060 DECR2Q9NUI1 292 aa9.45□□□□□ -0.9
SSU72-202ENST00000359060 AHRRA9YTQ3 701 aa9.45□□□□□ -0.9
SSU72-202ENST00000359060 C9JQL5 133 aa9.45□□□□□ -0.9
SSU72-202ENST00000359060 CRYABP02511 175 aaKnown RBP9.45□□□□□ -0.9
SSU72-202ENST00000359060 CCL20P78556 96 aa9.45□□□□□ -0.9
SSU72-202ENST00000359060 DLK1P80370 383 aa9.45□□□□□ -0.9
SSU72-202ENST00000359060 FABP9Q0Z7S8 132 aa9.45□□□□□ -0.9
SSU72-202ENST00000359060 IL15RAQ13261 267 aa9.45□□□□□ -0.9
SSU72-202ENST00000359060 LEAP2Q969E1 77 aa9.45□□□□□ -0.9
SSU72-202ENST00000359060 IL22RA2Q969J5 263 aa9.45□□□□□ -0.9
SSU72-202ENST00000359060 USB1Q9BQ65 265 aaKnown RBP9.45□□□□□ -0.9
SSU72-202ENST00000359060 GAB2Q9UQC2 676 aa9.45□□□□□ -0.9
SSU72-202ENST00000359060 TRGV10A0A0A0MS01 117 aa9.45□□□□□ -0.9
SSU72-202ENST00000359060 PSPNO60542 156 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms