RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 PAM16Q9Y3D7 125 aa11.83□□□□□ -0.52
VCP-201ENST00000358901 CHD5Q8TDI0 1954 aa11.83□□□□□ -0.52
VCP-201ENST00000358901 HEATR5BQ9P2D3 2071 aa11.83□□□□□ -0.52
VCP-201ENST00000358901 PLXNA1Q9UIW2 1896 aa11.83□□□□□ -0.52
VCP-201ENST00000358901 TMEM210A6NLX4 147 aa11.83□□□□□ -0.52
VCP-201ENST00000358901 B4E171 279 aa11.83□□□□□ -0.52
VCP-201ENST00000358901 BMPR1BO00238 502 aa11.83□□□□□ -0.52
VCP-201ENST00000358901 SRSF10O75494 262 aaKnown RBP11.83□□□□□ -0.52
VCP-201ENST00000358901 NEURL1O76050 574 aa11.83□□□□□ -0.52
VCP-201ENST00000358901 CXorf1O96002 111 aa11.83□□□□□ -0.52
VCP-201ENST00000358901 CYB5R3P00387 301 aaPredicted RBP11.83□□□□□ -0.52
VCP-201ENST00000358901 FGF5P12034 268 aa11.83□□□□□ -0.52
VCP-201ENST00000358901 TSPAN7P41732 249 aa11.83□□□□□ -0.52
VCP-201ENST00000358901 TIPARPQ7Z3E1 657 aaKnown RBP11.83□□□□□ -0.52
VCP-201ENST00000358901 TGIF2LYQ8IUE0 185 aa11.83□□□□□ -0.52
VCP-201ENST00000358901 NOTCH3Q9UM47 2321 aa11.83□□□□□ -0.52
VCP-201ENST00000358901 NDUFB4O95168 129 aa11.83□□□□□ -0.52
VCP-201ENST00000358901 PRRX1P54821 245 aa11.83□□□□□ -0.52
VCP-201ENST00000358901 LINC00114Q6XXX2 140 aa11.83□□□□□ -0.52
VCP-201ENST00000358901 OR1L6Q8NGR2 347 aa11.83□□□□□ -0.52
VCP-201ENST00000358901 TAF15Q92804 592 aaKnown RBP eCLIP11.83□□□□□ -0.52
VCP-201ENST00000358901 CBY1Q9Y3M2 126 aa11.83□□□□□ -0.52
VCP-201ENST00000358901 BRWD3Q6RI45 1802 aa11.83□□□□□ -0.52
VCP-201ENST00000358901 FAM90A27PA6NNH2 459 aa11.82□□□□□ -0.52
VCP-201ENST00000358901 ACAA1P09110 424 aaPredicted RBP11.82□□□□□ -0.52
VCP-201ENST00000358901 APELAP0DMC3 54 aa11.82□□□□□ -0.52
VCP-201ENST00000358901 COL10A1Q03692 680 aa11.82□□□□□ -0.52
VCP-201ENST00000358901 OR4X1Q8NH49 305 aa11.82□□□□□ -0.52
VCP-201ENST00000358901 ZNF236Q9UL36 1845 aa11.82□□□□□ -0.52
VCP-201ENST00000358901 M0R2Z0 102 aa11.82□□□□□ -0.52
VCP-201ENST00000358901 UCP2P55851 309 aa11.82□□□□□ -0.52
VCP-201ENST00000358901 LINC00518Q8N0U6 118 aa11.82□□□□□ -0.52
VCP-201ENST00000358901 NUDT16L1Q9BRJ7 211 aaKnown RBP11.82□□□□□ -0.52
VCP-201ENST00000358901 TP53BP1Q12888 1972 aaPredicted RBP11.82□□□□□ -0.52
VCP-201ENST00000358901 DANCRP0C864 163 aa11.82□□□□□ -0.52
VCP-201ENST00000358901 ATRAIDQ6UW56 229 aa11.82□□□□□ -0.52
VCP-201ENST00000358901 OR1L1Q8NH94 360 aa11.82□□□□□ -0.52
VCP-201ENST00000358901 FLYWCH2Q96CP2 140 aaKnown RBP11.82□□□□□ -0.52
VCP-201ENST00000358901 GPR61Q9BZJ8 451 aa11.82□□□□□ -0.52
VCP-201ENST00000358901 WIPI2Q9Y4P8 454 aa11.82□□□□□ -0.52
VCP-201ENST00000358901 ANKRD36A6QL64 1941 aa11.82□□□□□ -0.52
VCP-201ENST00000358901 PKDREJQ9NTG1 2253 aa11.82□□□□□ -0.52
VCP-201ENST00000358901 K7ESF4 209 aa11.81□□□□□ -0.52
VCP-201ENST00000358901 IGHMP01871 453 aa11.81□□□□□ -0.52
VCP-201ENST00000358901 REG1BP48304 166 aa11.81□□□□□ -0.52
VCP-201ENST00000358901 SLC35B1P78383 322 aa11.81□□□□□ -0.52
VCP-201ENST00000358901 COX19Q49B96 90 aa11.81□□□□□ -0.52
VCP-201ENST00000358901 STARD4Q96DR4 205 aa11.81□□□□□ -0.52
VCP-201ENST00000358901 RNF2Q99496 336 aa11.81□□□□□ -0.52
VCP-201ENST00000358901 NPVFQ9HCQ7 196 aa11.81□□□□□ -0.52
VCP-201ENST00000358901 FAM90A10PA6NDY2 464 aa11.81□□□□□ -0.52
VCP-201ENST00000358901 FAM90A18PA6NE21 464 aa11.81□□□□□ -0.52
VCP-201ENST00000358901 FAM90A16PA6NEW6 464 aa11.81□□□□□ -0.52
VCP-201ENST00000358901 FAM90A20PA6NIJ5 464 aa11.81□□□□□ -0.52
VCP-201ENST00000358901 FAM90A8PA6NJQ4 464 aa11.81□□□□□ -0.52
VCP-201ENST00000358901 FAM90A7PA6NKC0 464 aa11.81□□□□□ -0.52
VCP-201ENST00000358901 FAM90A22PA8MWA6 464 aa11.81□□□□□ -0.52
VCP-201ENST00000358901 FAM90A12PA8MX19 464 aa11.81□□□□□ -0.52
VCP-201ENST00000358901 FAM90A5PA8MXJ8 464 aa11.81□□□□□ -0.52
VCP-201ENST00000358901 FAM90A23PA8MXZ1 464 aa11.81□□□□□ -0.52
VCP-201ENST00000358901 FAM90A15PP0C7V4 464 aa11.81□□□□□ -0.52
VCP-201ENST00000358901 FAM90A13PP0C7W8 464 aa11.81□□□□□ -0.52
VCP-201ENST00000358901 FAM90A14PP0C7W9 464 aa11.81□□□□□ -0.52
VCP-201ENST00000358901 FAM90A24PP0C7X0 464 aa11.81□□□□□ -0.52
VCP-201ENST00000358901 COL8A1P27658 744 aa11.81□□□□□ -0.52
VCP-201ENST00000358901 FAM3BP58499 235 aaPredicted RBP11.81□□□□□ -0.52
VCP-201ENST00000358901 WDR25Q64LD2 544 aaPredicted RBP11.81□□□□□ -0.52
VCP-201ENST00000358901 SELENOHQ8IZQ5 122 aaKnown RBP11.81□□□□□ -0.52
VCP-201ENST00000358901 CRIPAKQ8N1N5 446 aa11.81□□□□□ -0.52
VCP-201ENST00000358901 SRXN1Q9BYN0 137 aa11.81□□□□□ -0.52
VCP-201ENST00000358901 WNT5BQ9H1J7 359 aa11.81□□□□□ -0.52
VCP-201ENST00000358901 MPTX1A8MV57 137 aa11.81□□□□□ -0.52
VCP-201ENST00000358901 A8MXK9 166 aa11.81□□□□□ -0.52
VCP-201ENST00000358901 PRR32B1ATL7 298 aa11.81□□□□□ -0.52
VCP-201ENST00000358901 PKIAP61925 76 aa11.81□□□□□ -0.52
VCP-201ENST00000358901 TMEM187Q14656 261 aa11.81□□□□□ -0.52
VCP-201ENST00000358901 ZNF596Q8TC21 504 aa11.81□□□□□ -0.52
VCP-201ENST00000358901 VN1R17PQ8TDU5 208 aa11.81□□□□□ -0.52
VCP-201ENST00000358901 SAP25Q8TEE9 199 aa11.81□□□□□ -0.52
VCP-201ENST00000358901 WNT5AP41221 380 aa11.81□□□□□ -0.52
VCP-201ENST00000358901 CEBPDP49716 269 aaPredicted RBP11.81□□□□□ -0.52
VCP-201ENST00000358901 GAS1P54826 345 aa11.81□□□□□ -0.52
VCP-201ENST00000358901 PCOLCEQ15113 449 aa11.81□□□□□ -0.52
VCP-201ENST00000358901 ELOBQ15370 118 aa11.81□□□□□ -0.52
VCP-201ENST00000358901 GABRA6Q16445 453 aa11.81□□□□□ -0.52
VCP-201ENST00000358901 PCGF1Q9BSM1 259 aa11.81□□□□□ -0.52
VCP-201ENST00000358901 AKIRIN1Q9H9L7 192 aaPredicted RBP11.81□□□□□ -0.52
VCP-201ENST00000358901 WASHC3Q9Y3C0 194 aa11.81□□□□□ -0.52
VCP-201ENST00000358901 PXMP4Q9Y6I8 212 aa11.81□□□□□ -0.52
VCP-201ENST00000358901 SPAARA0A1B0GVQ0 90 aa11.8□□□□□ -0.52
VCP-201ENST00000358901 RNF222A6NCQ9 220 aa11.8□□□□□ -0.52
VCP-201ENST00000358901 MELTFP08582 738 aa11.8□□□□□ -0.52
VCP-201ENST00000358901 RPL31P62899 125 aaKnown RBP11.8□□□□□ -0.52
VCP-201ENST00000358901 CCL8P80075 99 aa11.8□□□□□ -0.52
VCP-201ENST00000358901 TGIF1Q15583 401 aa11.8□□□□□ -0.52
VCP-201ENST00000358901 FAM214BQ7L5A3 538 aa11.8□□□□□ -0.52
VCP-201ENST00000358901 OR2D3Q8NGH3 330 aa11.8□□□□□ -0.52
VCP-201ENST00000358901 OR1L8Q8NGR8 309 aa11.8□□□□□ -0.52
VCP-201ENST00000358901 DNASE2BQ8WZ79 361 aa11.8□□□□□ -0.52
VCP-201ENST00000358901 HIST1H2BAQ96A08 127 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms