RNA–Protein interactions for RNA: ENST00000358894.10

COL20A1-201, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL20A1, Length 4,172 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-201ENST00000358894 LAMA3Q16787 3333 aa10.52□□□□□ -0.73
COL20A1-201ENST00000358894 TRAV17A0A0B4J275 112 aa10.52□□□□□ -0.73
COL20A1-201ENST00000358894 PMS2P1A4D2B8 440 aa10.52□□□□□ -0.73
COL20A1-201ENST00000358894 S100A7P31151 101 aa10.52□□□□□ -0.73
COL20A1-201ENST00000358894 AESQ08117 197 aa10.52□□□□□ -0.73
COL20A1-201ENST00000358894 TRIP6Q15654 476 aaKnown RBP10.52□□□□□ -0.73
COL20A1-201ENST00000358894 CSRP2Q16527 193 aa10.52□□□□□ -0.73
COL20A1-201ENST00000358894 TMEM183BQ1AE95 376 aa10.52□□□□□ -0.73
COL20A1-201ENST00000358894 LRRC29Q8WV35 223 aa10.52□□□□□ -0.73
COL20A1-201ENST00000358894 C14orf144Q96I85 54 aa10.52□□□□□ -0.73
COL20A1-201ENST00000358894 ACTR3CQ9C0K3 210 aaPredicted RBP10.52□□□□□ -0.73
COL20A1-201ENST00000358894 A0A1W2PPE3 182 aa10.51□□□□□ -0.73
COL20A1-201ENST00000358894 COLCA2A8K830 154 aa10.51□□□□□ -0.73
COL20A1-201ENST00000358894 CEBPDP49716 269 aaPredicted RBP10.51□□□□□ -0.73
COL20A1-201ENST00000358894 ZNF826PQ6ZT77 177 aa10.51□□□□□ -0.73
COL20A1-201ENST00000358894 NABP1Q96AH0 204 aa10.51□□□□□ -0.73
COL20A1-201ENST00000358894 RARRES2Q99969 163 aa10.51□□□□□ -0.73
COL20A1-201ENST00000358894 PRDM14Q9GZV8 571 aa10.51□□□□□ -0.73
COL20A1-201ENST00000358894 DYNLRB1Q9NP97 96 aa10.51□□□□□ -0.73
COL20A1-201ENST00000358894 SEMA5BQ9P283 1151 aa10.51□□□□□ -0.73
COL20A1-201ENST00000358894 CACFD1Q9UGQ2 172 aa10.51□□□□□ -0.73
COL20A1-201ENST00000358894 PLCE1Q9P212 2302 aa10.51□□□□□ -0.73
COL20A1-201ENST00000358894 HAND1O96004 215 aa10.51□□□□□ -0.73
COL20A1-201ENST00000358894 CD82P27701 267 aa10.51□□□□□ -0.73
COL20A1-201ENST00000358894 KHDC3LQ587J8 217 aa10.51□□□□□ -0.73
COL20A1-201ENST00000358894 OR10A7Q8NGE5 316 aa10.51□□□□□ -0.73
COL20A1-201ENST00000358894 OR4A4PQ8NGN8 299 aa10.51□□□□□ -0.73
COL20A1-201ENST00000358894 EDARADDQ8WWZ3 215 aa10.51□□□□□ -0.73
COL20A1-201ENST00000358894 MARS2Q96GW9 593 aaKnown RBP10.51□□□□□ -0.73
COL20A1-201ENST00000358894 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.51□□□□□ -0.73
COL20A1-201ENST00000358894 RANBP2P49792 3224 aaKnown RBP10.51□□□□□ -0.73
COL20A1-201ENST00000358894 COL5A1-AS1Q5SY13 56 aa10.51□□□□□ -0.73
COL20A1-201ENST00000358894 SLC23A3Q6PIS1 610 aa10.51□□□□□ -0.73
COL20A1-201ENST00000358894 CHD7Q9P2D1 2997 aa10.51□□□□□ -0.73
COL20A1-201ENST00000358894 IGKV1-12A0A0C4DH73 117 aa10.51□□□□□ -0.73
COL20A1-201ENST00000358894 IGKV1D-12P01611 117 aa10.51□□□□□ -0.73
COL20A1-201ENST00000358894 TRGC1P0CF51 173 aa10.51□□□□□ -0.73
COL20A1-201ENST00000358894 SLC25A6P12236 298 aa10.51□□□□□ -0.73
COL20A1-201ENST00000358894 G6PCP35575 357 aa10.51□□□□□ -0.73
COL20A1-201ENST00000358894 MDH2P40926 338 aaKnown RBP10.51□□□□□ -0.73
COL20A1-201ENST00000358894 FOXG1P55316 489 aaPredicted RBP10.51□□□□□ -0.73
COL20A1-201ENST00000358894 PAX5Q02548 391 aa10.51□□□□□ -0.73
COL20A1-201ENST00000358894 PYY3Q5JQD4 70 aa10.51□□□□□ -0.73
COL20A1-201ENST00000358894 PINX1Q96BK5 328 aaKnown RBP10.51□□□□□ -0.73
COL20A1-201ENST00000358894 TBX15Q96SF7 602 aa10.51□□□□□ -0.73
COL20A1-201ENST00000358894 S1PR3Q99500 378 aa10.51□□□□□ -0.73
COL20A1-201ENST00000358894 Q9N2K0 584 aa10.51□□□□□ -0.73
COL20A1-201ENST00000358894 DLL3Q9NYJ7 618 aa10.51□□□□□ -0.73
COL20A1-201ENST00000358894 RPH3ALQ9UNE2 315 aa10.51□□□□□ -0.73
COL20A1-201ENST00000358894 CTSSP25774 331 aa10.5□□□□□ -0.73
COL20A1-201ENST00000358894 FFAR4Q5NUL3 377 aa10.5□□□□□ -0.73
COL20A1-201ENST00000358894 FAM78BQ5VT40 261 aa10.5□□□□□ -0.73
COL20A1-201ENST00000358894 CORO2AQ92828 525 aa10.5□□□□□ -0.73
COL20A1-201ENST00000358894 CIB3Q96Q77 187 aaPredicted RBP10.5□□□□□ -0.73
COL20A1-201ENST00000358894 OR1A1Q9P1Q5 309 aa10.5□□□□□ -0.73
COL20A1-201ENST00000358894 NCOA6Q14686 2063 aaPredicted RBP10.5□□□□□ -0.73
COL20A1-201ENST00000358894 PINLYPA6NC86 204 aa10.5□□□□□ -0.73
COL20A1-201ENST00000358894 M0R296 226 aa10.5□□□□□ -0.73
COL20A1-201ENST00000358894 RRP8O43159 456 aaKnown RBP10.5□□□□□ -0.73
COL20A1-201ENST00000358894 PGLYRP1O75594 196 aaPredicted RBP10.5□□□□□ -0.73
COL20A1-201ENST00000358894 SNRPCP09234 159 aaKnown RBP10.5□□□□□ -0.73
COL20A1-201ENST00000358894 ACOT6Q3I5F7 207 aaPredicted RBP10.5□□□□□ -0.73
COL20A1-201ENST00000358894 UHRF2Q96PU4 802 aa10.5□□□□□ -0.73
COL20A1-201ENST00000358894 HEATR1Q9H583 2144 aaKnown RBP10.5□□□□□ -0.73
COL20A1-201ENST00000358894 SPAARA0A1B0GVQ0 90 aa10.5□□□□□ -0.73
COL20A1-201ENST00000358894 LNP1A1A4G5 178 aa10.5□□□□□ -0.73
COL20A1-201ENST00000358894 ZNF716A6NP11 495 aa10.5□□□□□ -0.73
COL20A1-201ENST00000358894 TMEM241Q24JQ0 296 aa10.5□□□□□ -0.73
COL20A1-201ENST00000358894 C5orf24Q7Z6I8 188 aa10.5□□□□□ -0.73
COL20A1-201ENST00000358894 VN1R17PQ8TDU5 208 aa10.5□□□□□ -0.73
COL20A1-201ENST00000358894 IGKV1-27A0A075B6S5 117 aa10.49□□□□□ -0.73
COL20A1-201ENST00000358894 OR2H2O95918 312 aa10.49□□□□□ -0.73
COL20A1-201ENST00000358894 MPZP25189 248 aa10.49□□□□□ -0.73
COL20A1-201ENST00000358894 Q6ZN92 141 aa10.49□□□□□ -0.73
COL20A1-201ENST00000358894 LHFPL1Q86WI0 220 aa10.49□□□□□ -0.73
COL20A1-201ENST00000358894 SELENOHQ8IZQ5 122 aaKnown RBP10.49□□□□□ -0.73
COL20A1-201ENST00000358894 ZNF703Q9H7S9 590 aaPredicted RBP10.49□□□□□ -0.73
COL20A1-201ENST00000358894 LYRM2Q9NU23 88 aaPredicted RBP10.49□□□□□ -0.73
COL20A1-201ENST00000358894 ARL2-SNX15V9GYD0 113 aa10.49□□□□□ -0.73
COL20A1-201ENST00000358894 RHBDL1O75783 438 aa10.49□□□□□ -0.73
COL20A1-201ENST00000358894 OPN1MWP04001 364 aa10.49□□□□□ -0.73
COL20A1-201ENST00000358894 OPN1MW2P0DN77 364 aa10.49□□□□□ -0.73
COL20A1-201ENST00000358894 OPN1MW3P0DN78 364 aa10.49□□□□□ -0.73
COL20A1-201ENST00000358894 TPPP2P59282 170 aa10.49□□□□□ -0.73
COL20A1-201ENST00000358894 KLHDC1Q8N7A1 406 aa10.49□□□□□ -0.73
COL20A1-201ENST00000358894 GALNT14Q96FL9 552 aa10.49□□□□□ -0.73
COL20A1-201ENST00000358894 RNF122Q9H9V4 155 aa10.49□□□□□ -0.73
COL20A1-201ENST00000358894 CLCF1Q9UBD9 225 aa10.49□□□□□ -0.73
COL20A1-201ENST00000358894 FOXD3Q9UJU5 478 aaPredicted RBP10.49□□□□□ -0.73
COL20A1-201ENST00000358894 ENSAO43768 121 aaKnown RBP10.49□□□□□ -0.73
COL20A1-201ENST00000358894 PITX3O75364 302 aa10.49□□□□□ -0.73
COL20A1-201ENST00000358894 ZNF737O75373 536 aa10.49□□□□□ -0.73
COL20A1-201ENST00000358894 CCKARP32238 428 aa10.49□□□□□ -0.73
COL20A1-201ENST00000358894 IGFBP7Q16270 282 aa10.49□□□□□ -0.73
COL20A1-201ENST00000358894 BSXQ3C1V8 233 aa10.49□□□□□ -0.73
COL20A1-201ENST00000358894 ABHD5Q8WTS1 349 aa10.49□□□□□ -0.73
COL20A1-201ENST00000358894 C22orf15Q8WYQ4 148 aa10.49□□□□□ -0.73
COL20A1-201ENST00000358894 GPR146Q96CH1 333 aa10.49□□□□□ -0.73
COL20A1-201ENST00000358894 TAAR6Q96RI8 345 aa10.49□□□□□ -0.73
COL20A1-201ENST00000358894 NDUFAF3Q9BU61 184 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms