RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 HLA-DQB1P01920 261 aa11.18□□□□□ -0.62
SMC4-202ENST00000357388 RBM11P57052 281 aaKnown RBP11.18□□□□□ -0.62
SMC4-202ENST00000357388 IFITM3Q01628 133 aa11.18□□□□□ -0.62
SMC4-202ENST00000357388 NUP37Q8NFH4 326 aa11.18□□□□□ -0.62
SMC4-202ENST00000357388 OR10AC1Q8NH08 325 aa11.18□□□□□ -0.62
SMC4-202ENST00000357388 PRELID3AQ96N28 172 aa11.18□□□□□ -0.62
SMC4-202ENST00000357388 OPN3Q9H1Y3 402 aaPredicted RBP11.18□□□□□ -0.62
SMC4-202ENST00000357388 AUP1Q9Y679 476 aa11.18□□□□□ -0.62
SMC4-202ENST00000357388 TMEM250H0YL14 139 aa11.17□□□□□ -0.62
SMC4-202ENST00000357388 DLL1O00548 723 aa11.17□□□□□ -0.62
SMC4-202ENST00000357388 TYMSP04818 313 aa11.17□□□□□ -0.62
SMC4-202ENST00000357388 KLK2P20151 261 aa11.17□□□□□ -0.62
SMC4-202ENST00000357388 GPR6P46095 362 aaPredicted RBP11.17□□□□□ -0.62
SMC4-202ENST00000357388 LILRA6Q6PI73 481 aa11.17□□□□□ -0.62
SMC4-202ENST00000357388 DNAJC4Q9NNZ3 241 aa11.17□□□□□ -0.62
SMC4-202ENST00000357388 TRBV5-3A0A0A0MS03 114 aa11.17□□□□□ -0.62
SMC4-202ENST00000357388 CA7P43166 264 aa11.17□□□□□ -0.62
SMC4-202ENST00000357388 PGFP49763 221 aa11.17□□□□□ -0.62
SMC4-202ENST00000357388 C2orf83Q53S99 150 aa11.17□□□□□ -0.62
SMC4-202ENST00000357388 INO80CQ6PI98 192 aaPredicted RBP11.17□□□□□ -0.62
SMC4-202ENST00000357388 FADS6Q8N9I5 356 aa11.17□□□□□ -0.62
SMC4-202ENST00000357388 H0YL77 283 aa11.17□□□□□ -0.62
SMC4-202ENST00000357388 PEX11BO96011 259 aa11.17□□□□□ -0.62
SMC4-202ENST00000357388 RND3P61587 244 aa11.17□□□□□ -0.62
SMC4-202ENST00000357388 RUNX1Q01196 453 aa11.17□□□□□ -0.62
SMC4-202ENST00000357388 IFITM2Q01629 132 aa11.17□□□□□ -0.62
SMC4-202ENST00000357388 MRAP2Q96G30 205 aa11.17□□□□□ -0.62
SMC4-202ENST00000357388 MARS2Q96GW9 593 aaKnown RBP11.17□□□□□ -0.62
SMC4-202ENST00000357388 MRPL32Q9BYC8 188 aaKnown RBP11.17□□□□□ -0.62
SMC4-202ENST00000357388 OR2H1Q9GZK4 316 aa11.17□□□□□ -0.62
SMC4-202ENST00000357388 RABAC1Q9UI14 185 aa11.17□□□□□ -0.62
SMC4-202ENST00000357388 ARID1BQ8NFD5 2236 aaPredicted RBP11.17□□□□□ -0.62
SMC4-202ENST00000357388 A0A1W2PQM1 296 aa11.17□□□□□ -0.62
SMC4-202ENST00000357388 TMEM30AQ9NV96 361 aa11.17□□□□□ -0.62
SMC4-202ENST00000357388 MRPL16Q9NX20 251 aaKnown RBP11.17□□□□□ -0.62
SMC4-202ENST00000357388 UBR2Q8IWV8 1755 aa11.17□□□□□ -0.62
SMC4-202ENST00000357388 CEACAM18A8MTB9 384 aa11.16□□□□□ -0.62
SMC4-202ENST00000357388 HIST1H1AQ02539 215 aaPredicted RBP11.16□□□□□ -0.62
SMC4-202ENST00000357388 PLSCR2Q9NRY7 297 aa11.16□□□□□ -0.62
SMC4-202ENST00000357388 PRSS2P07478 247 aa11.16□□□□□ -0.62
SMC4-202ENST00000357388 PRDX2P32119 198 aa11.16□□□□□ -0.62
SMC4-202ENST00000357388 HIKESHIQ53FT3 197 aa11.16□□□□□ -0.62
SMC4-202ENST00000357388 OR1K1Q8NGR3 316 aa11.16□□□□□ -0.62
SMC4-202ENST00000357388 A0A1W2PS18 150 aa11.16□□□□□ -0.62
SMC4-202ENST00000357388 TMEM262E9PQX1 116 aa11.16□□□□□ -0.62
SMC4-202ENST00000357388 ROM1Q03395 351 aa11.16□□□□□ -0.62
SMC4-202ENST00000357388 SPINK14Q6IE38 97 aa11.16□□□□□ -0.62
SMC4-202ENST00000357388 ZCCHC14Q8WYQ9 949 aaKnown RBP11.16□□□□□ -0.62
SMC4-202ENST00000357388 PLA2G2FQ9BZM2 168 aa11.16□□□□□ -0.62
SMC4-202ENST00000357388 ZNF430Q9H8G1 570 aaPredicted RBP11.16□□□□□ -0.62
SMC4-202ENST00000357388 IL36RNQ9UBH0 155 aa11.16□□□□□ -0.62
SMC4-202ENST00000357388 SPCS1Q9Y6A9 102 aa11.16□□□□□ -0.62
SMC4-202ENST00000357388 SS18L1O75177 396 aaPredicted RBP11.16□□□□□ -0.62
SMC4-202ENST00000357388 CISD3P0C7P0 127 aa11.16□□□□□ -0.62
SMC4-202ENST00000357388 ATP5IP56385 69 aaPredicted RBP11.16□□□□□ -0.62
SMC4-202ENST00000357388 GAB4Q2WGN9 574 aa11.16□□□□□ -0.62
SMC4-202ENST00000357388 MOGAT3Q86VF5 341 aa11.16□□□□□ -0.62
SMC4-202ENST00000357388 MMD2Q8IY49 270 aa11.16□□□□□ -0.62
SMC4-202ENST00000357388 PSMG3Q9BT73 122 aaPredicted RBP11.16□□□□□ -0.62
SMC4-202ENST00000357388 DERL1Q9BUN8 251 aa11.16□□□□□ -0.62
SMC4-202ENST00000357388 F11RQ9Y624 299 aaKnown RBP11.16□□□□□ -0.62
SMC4-202ENST00000357388 C5P01031 1676 aa11.16□□□□□ -0.62
SMC4-202ENST00000357388 A0A1W2PPC1 479 aa11.15□□□□□ -0.62
SMC4-202ENST00000357388 GHRHP01286 108 aa11.15□□□□□ -0.62
SMC4-202ENST00000357388 IL9P15248 144 aa11.15□□□□□ -0.62
SMC4-202ENST00000357388 TMEM92Q6UXU6 159 aa11.15□□□□□ -0.62
SMC4-202ENST00000357388 GCSAMQ8N6F7 178 aa11.15□□□□□ -0.62
SMC4-202ENST00000357388 VSTM2LQ96N03 204 aa11.15□□□□□ -0.62
SMC4-202ENST00000357388 FLRT3Q9NZU0 649 aa11.15□□□□□ -0.62
SMC4-202ENST00000357388 MAP1BP46821 2468 aaKnown RBP11.15□□□□□ -0.62
SMC4-202ENST00000357388 C7orf71A4D174 169 aa11.15□□□□□ -0.62
SMC4-202ENST00000357388 RECKO95980 971 aa11.15□□□□□ -0.62
SMC4-202ENST00000357388 TMEM177Q53S58 311 aa11.15□□□□□ -0.62
SMC4-202ENST00000357388 C5orf30Q96GV9 206 aa11.15□□□□□ -0.62
SMC4-202ENST00000357388 ZNF414Q96IQ9 312 aa11.15□□□□□ -0.62
SMC4-202ENST00000357388 PGLYRP4Q96LB8 373 aa11.15□□□□□ -0.62
SMC4-202ENST00000357388 SF3B6Q9Y3B4 125 aaKnown RBP11.15□□□□□ -0.62
SMC4-202ENST00000357388 BGLAPP02818 100 aa11.15□□□□□ -0.62
SMC4-202ENST00000357388 EBLN2Q6P2I7 272 aa11.15□□□□□ -0.62
SMC4-202ENST00000357388 YBX2Q9Y2T7 364 aaKnown RBP11.15□□□□□ -0.62
SMC4-202ENST00000357388 A0A087WWC5 75 aa11.15□□□□□ -0.62
SMC4-202ENST00000357388 A0A0U1RQV5 110 aa11.15□□□□□ -0.62
SMC4-202ENST00000357388 EFNB2P52799 333 aa11.15□□□□□ -0.62
SMC4-202ENST00000357388 HBBP68871 147 aa11.15□□□□□ -0.62
SMC4-202ENST00000357388 ZNF658BQ4V348 819 aaPredicted RBP11.15□□□□□ -0.62
SMC4-202ENST00000357388 OR5A1Q8NGJ0 315 aa11.15□□□□□ -0.62
SMC4-202ENST00000357388 OR4D5Q8NGN0 318 aa11.15□□□□□ -0.62
SMC4-202ENST00000357388 RASL10BQ96S79 203 aa11.15□□□□□ -0.62
SMC4-202ENST00000357388 PCOLCE2Q9UKZ9 415 aa11.15□□□□□ -0.62
SMC4-202ENST00000357388 TRAV30A0A087WSZ9 112 aa11.15□□□□□ -0.63
SMC4-202ENST00000357388 C8orf88P0DMB2 117 aa11.15□□□□□ -0.63
SMC4-202ENST00000357388 ANOS1P23352 680 aa11.15□□□□□ -0.63
SMC4-202ENST00000357388 MC5RP33032 325 aa11.15□□□□□ -0.63
SMC4-202ENST00000357388 ZFP36L2P47974 494 aaKnown RBP11.15□□□□□ -0.63
SMC4-202ENST00000357388 ZNF645Q8N7E2 425 aa11.15□□□□□ -0.63
SMC4-202ENST00000357388 APCDD1LQ8NCL9 501 aa11.15□□□□□ -0.63
SMC4-202ENST00000357388 PPP1R17O96001 155 aa11.14□□□□□ -0.63
SMC4-202ENST00000357388 MEIG1Q5JSS6 88 aa11.14□□□□□ -0.63
SMC4-202ENST00000357388 TRBV5-5A0A0J9YX44 114 aa11.14□□□□□ -0.63
SMC4-202ENST00000357388 A0A1B0GW15 77 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms