RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 BET1LQ9NYM9 111 aa4.81□□□□□ -1.64
PTPRD-202ENST00000356435 HSPB7Q9UBY9 170 aa4.81□□□□□ -1.64
PTPRD-202ENST00000356435 CEACAM18A8MTB9 384 aa4.81□□□□□ -1.64
PTPRD-202ENST00000356435 PRSS2P07478 247 aa4.81□□□□□ -1.64
PTPRD-202ENST00000356435 CEACAM21Q3KPI0 293 aa4.81□□□□□ -1.64
PTPRD-202ENST00000356435 OR4C13Q8NGP0 309 aa4.81□□□□□ -1.64
PTPRD-202ENST00000356435 UCN2Q96RP3 112 aa4.81□□□□□ -1.64
PTPRD-202ENST00000356435 CLEC7AQ9BXN2 247 aa4.81□□□□□ -1.64
PTPRD-202ENST00000356435 NGFRP08138 427 aa4.81□□□□□ -1.64
PTPRD-202ENST00000356435 PSG2P11465 335 aa4.81□□□□□ -1.64
PTPRD-202ENST00000356435 TSPO2Q5TGU0 170 aa4.81□□□□□ -1.64
PTPRD-202ENST00000356435 ZNF418Q8TF45 676 aaPredicted RBP4.81□□□□□ -1.64
PTPRD-202ENST00000356435 SNX22Q96L94 193 aa4.81□□□□□ -1.64
PTPRD-202ENST00000356435 CTXND1A0A1B0GTU2 59 aa4.81□□□□□ -1.64
PTPRD-202ENST00000356435 SPINK2P20155 84 aa4.81□□□□□ -1.64
PTPRD-202ENST00000356435 POLR2GP62487 172 aaKnown RBP eCLIP4.81□□□□□ -1.64
PTPRD-202ENST00000356435 KLF9Q13886 244 aaPredicted RBP4.81□□□□□ -1.64
PTPRD-202ENST00000356435 OR4B1Q8NGF8 309 aa4.81□□□□□ -1.64
PTPRD-202ENST00000356435 ZNF430Q9H8G1 570 aaPredicted RBP4.81□□□□□ -1.64
PTPRD-202ENST00000356435 MRPS18BQ9Y676 258 aaKnown RBP4.81□□□□□ -1.64
PTPRD-202ENST00000356435 CNTRLQ7Z7A1 2325 aa4.81□□□□□ -1.64
PTPRD-202ENST00000356435 PITX3O75364 302 aa4.81□□□□□ -1.64
PTPRD-202ENST00000356435 GPX1P07203 203 aa4.81□□□□□ -1.64
PTPRD-202ENST00000356435 MFAP4P55083 255 aa4.81□□□□□ -1.64
PTPRD-202ENST00000356435 TMEM50BP56557 158 aa4.81□□□□□ -1.64
PTPRD-202ENST00000356435 NSUN5P2Q63ZY6 315 aa4.81□□□□□ -1.64
PTPRD-202ENST00000356435 REC114Q7Z4M0 266 aa4.81□□□□□ -1.64
PTPRD-202ENST00000356435 TMEM251Q8N6I4 163 aa4.81□□□□□ -1.64
PTPRD-202ENST00000356435 MRGPRFQ96AM1 343 aa4.81□□□□□ -1.64
PTPRD-202ENST00000356435 RAXQ9Y2V3 346 aa4.81□□□□□ -1.64
PTPRD-202ENST00000356435 C17orf51A8MQB3 221 aa4.8□□□□□ -1.64
PTPRD-202ENST00000356435 CFDP00746 253 aaPredicted RBP4.8□□□□□ -1.64
PTPRD-202ENST00000356435 FGF5P12034 268 aa4.8□□□□□ -1.64
PTPRD-202ENST00000356435 DLX6P56179 175 aa4.8□□□□□ -1.64
PTPRD-202ENST00000356435 SELENOTP62341 195 aa4.8□□□□□ -1.64
PTPRD-202ENST00000356435 ZNF56Q15929 161 aa4.8□□□□□ -1.64
PTPRD-202ENST00000356435 PIGYQ3MUY2 71 aa4.8□□□□□ -1.64
PTPRD-202ENST00000356435 PAPPA-AS1Q5QFB9 102 aa4.8□□□□□ -1.64
PTPRD-202ENST00000356435 TBX15Q96SF7 602 aa4.8□□□□□ -1.64
PTPRD-202ENST00000356435 FAM60AQ9NP50 221 aa4.8□□□□□ -1.64
PTPRD-202ENST00000356435 OPN4Q9UHM6 478 aa4.8□□□□□ -1.64
PTPRD-202ENST00000356435 KIAA0100Q14667 2235 aaKnown RBP4.8□□□□□ -1.64
PTPRD-202ENST00000356435 TMEM229AB2RXF0 380 aa4.8□□□□□ -1.64
PTPRD-202ENST00000356435 NKX2-8O15522 239 aa4.8□□□□□ -1.64
PTPRD-202ENST00000356435 CDS2O95674 445 aa4.8□□□□□ -1.64
PTPRD-202ENST00000356435 PPP1R17O96001 155 aa4.8□□□□□ -1.64
PTPRD-202ENST00000356435 CLEC18BQ6UXF7 455 aa4.8□□□□□ -1.64
PTPRD-202ENST00000356435 ZNF645Q8N7E2 425 aa4.8□□□□□ -1.64
PTPRD-202ENST00000356435 ITLN1Q8WWA0 313 aa4.8□□□□□ -1.64
PTPRD-202ENST00000356435 CDK5RAP2Q96SN8 1893 aa4.8□□□□□ -1.64
PTPRD-202ENST00000356435 IGKV3D-15A0A087WSY6 115 aa4.8□□□□□ -1.64
PTPRD-202ENST00000356435 IGKV3-15P01624 115 aa4.8□□□□□ -1.64
PTPRD-202ENST00000356435 CD74P04233 296 aa4.8□□□□□ -1.64
PTPRD-202ENST00000356435 CD99P14209 185 aa4.8□□□□□ -1.64
PTPRD-202ENST00000356435 IGFBP6P24592 240 aaPredicted RBP4.8□□□□□ -1.64
PTPRD-202ENST00000356435 OR1K1Q8NGR3 316 aa4.8□□□□□ -1.64
PTPRD-202ENST00000356435 GPR82Q96P67 336 aa4.8□□□□□ -1.64
PTPRD-202ENST00000356435 IDI2-AS1Q9NZ38 188 aa4.8□□□□□ -1.64
PTPRD-202ENST00000356435 SIPA1L1O43166 1804 aa4.8□□□□□ -1.64
PTPRD-202ENST00000356435 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.8□□□□□ -1.64
PTPRD-202ENST00000356435 ZNF815PA8K554 130 aa4.8□□□□□ -1.64
PTPRD-202ENST00000356435 H7C1H1 209 aa4.8□□□□□ -1.64
PTPRD-202ENST00000356435 GCM2O75603 506 aaPredicted RBP4.8□□□□□ -1.64
PTPRD-202ENST00000356435 HBZP02008 142 aa4.8□□□□□ -1.64
PTPRD-202ENST00000356435 LIPFP07098 398 aa4.8□□□□□ -1.64
PTPRD-202ENST00000356435 ANOS1P23352 680 aa4.8□□□□□ -1.64
PTPRD-202ENST00000356435 ERVS71-1P61550 626 aa4.8□□□□□ -1.64
PTPRD-202ENST00000356435 RPS4XP62701 263 aaKnown RBP4.8□□□□□ -1.64
PTPRD-202ENST00000356435 RPL24P83731 157 aaKnown RBP4.8□□□□□ -1.64
PTPRD-202ENST00000356435 SLC35E3Q7Z769 313 aa4.8□□□□□ -1.64
PTPRD-202ENST00000356435 C10orf111Q8N326 155 aa4.8□□□□□ -1.64
PTPRD-202ENST00000356435 EAF1Q96JC9 268 aaPredicted RBP4.8□□□□□ -1.64
PTPRD-202ENST00000356435 IGHV1-69-2A0A0G2JMI3 117 aa4.8□□□□□ -1.64
PTPRD-202ENST00000356435 NPIPB11E5RHQ5 1161 aa4.8□□□□□ -1.64
PTPRD-202ENST00000356435 IGHV4-34P06331 123 aa4.8□□□□□ -1.64
PTPRD-202ENST00000356435 HOXA6P31267 233 aa4.8□□□□□ -1.64
PTPRD-202ENST00000356435 PRSS12P56730 875 aa4.8□□□□□ -1.64
PTPRD-202ENST00000356435 PLPPR5Q32ZL2 321 aa4.8□□□□□ -1.64
PTPRD-202ENST00000356435 MEIG1Q5JSS6 88 aa4.8□□□□□ -1.64
PTPRD-202ENST00000356435 LSM10Q969L4 123 aaKnown RBP4.8□□□□□ -1.64
PTPRD-202ENST00000356435 ABHD1Q96SE0 405 aa4.8□□□□□ -1.64
PTPRD-202ENST00000356435 TLNRD1Q9H1K6 362 aa4.8□□□□□ -1.64
PTPRD-202ENST00000356435 PRSS50Q9UI38 385 aa4.8□□□□□ -1.64
PTPRD-202ENST00000356435 VAX2Q9UIW0 290 aa4.8□□□□□ -1.64
PTPRD-202ENST00000356435 ZNF253O75346 499 aa4.8□□□□□ -1.64
PTPRD-202ENST00000356435 TMEM88Q6PEY1 159 aa4.8□□□□□ -1.64
PTPRD-202ENST00000356435 OR11H7Q8NGC8 314 aa4.8□□□□□ -1.64
PTPRD-202ENST00000356435 SP7Q8TDD2 431 aaPredicted RBP4.8□□□□□ -1.64
PTPRD-202ENST00000356435 TMEM262E9PQX1 116 aa4.8□□□□□ -1.64
PTPRD-202ENST00000356435 CDX1P47902 265 aaPredicted RBP4.8□□□□□ -1.64
PTPRD-202ENST00000356435 ZNF600Q6ZNG1 722 aa4.8□□□□□ -1.64
PTPRD-202ENST00000356435 RAB24Q969Q5 203 aa4.8□□□□□ -1.64
PTPRD-202ENST00000356435 FLRT3Q9NZU0 649 aa4.8□□□□□ -1.64
PTPRD-202ENST00000356435 PEMTQ9UBM1 199 aa4.8□□□□□ -1.64
PTPRD-202ENST00000356435 ANKRD20A5PA0PJZ0 165 aa4.79□□□□□ -1.64
PTPRD-202ENST00000356435 CX3CL1P78423 397 aa4.79□□□□□ -1.64
PTPRD-202ENST00000356435 KCNK17Q96T54 332 aa4.79□□□□□ -1.64
PTPRD-202ENST00000356435 SCN2AQ99250 2005 aa4.79□□□□□ -1.64
PTPRD-202ENST00000356435 RBFOX2O43251 390 aaKnown RBP eCLIP4.79□□□□□ -1.64
PTPRD-202ENST00000356435 SPINT1O43278 529 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms