RNA–Protein interactions for RNA: ENST00000355430.4

COLCA1-201, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,442 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-201ENST00000355430 AUP1Q9Y679 476 aa10.59□□□□□ -0.71
COLCA1-201ENST00000355430 HSPB1P04792 205 aaKnown RBP10.58□□□□□ -0.72
COLCA1-201ENST00000355430 PMCHP20382 165 aa10.58□□□□□ -0.72
COLCA1-201ENST00000355430 LILRB1Q8NHL6 650 aaPredicted RBP10.58□□□□□ -0.72
COLCA1-201ENST00000355430 ANAPC16Q96DE5 110 aa10.58□□□□□ -0.72
COLCA1-201ENST00000355430 TP53RKQ96S44 253 aa10.58□□□□□ -0.72
COLCA1-201ENST00000355430 VAMP8Q9BV40 100 aa10.58□□□□□ -0.72
COLCA1-201ENST00000355430 H0Y980 276 aa10.58□□□□□ -0.72
COLCA1-201ENST00000355430 CLDN14O95500 239 aa10.58□□□□□ -0.72
COLCA1-201ENST00000355430 OR5G3P0C626 314 aa10.58□□□□□ -0.72
COLCA1-201ENST00000355430 F2RP25116 425 aa10.58□□□□□ -0.72
COLCA1-201ENST00000355430 PRR27Q6MZM9 219 aa10.58□□□□□ -0.72
COLCA1-201ENST00000355430 AURKAIP1Q9NWT8 199 aaPredicted RBP10.58□□□□□ -0.72
COLCA1-201ENST00000355430 TREM2Q9NZC2 230 aa10.58□□□□□ -0.72
COLCA1-201ENST00000355430 COL4A6Q14031 1691 aa10.58□□□□□ -0.72
COLCA1-201ENST00000355430 PLXND1Q9Y4D7 1925 aa10.58□□□□□ -0.72
COLCA1-201ENST00000355430 LOC390937A0A1W2PQ73 354 aa10.58□□□□□ -0.72
COLCA1-201ENST00000355430 HAND1O96004 215 aa10.58□□□□□ -0.72
COLCA1-201ENST00000355430 FGF12P61328 243 aa10.58□□□□□ -0.72
COLCA1-201ENST00000355430 PKIAP61925 76 aa10.58□□□□□ -0.72
COLCA1-201ENST00000355430 MRPL30Q8TCC3 161 aaKnown RBP10.58□□□□□ -0.72
COLCA1-201ENST00000355430 GP6Q9HCN6 339 aa10.58□□□□□ -0.72
COLCA1-201ENST00000355430 PITPNC1Q9UKF7 332 aa10.58□□□□□ -0.72
COLCA1-201ENST00000355430 TCF20Q9UGU0 1960 aaKnown RBP10.58□□□□□ -0.72
COLCA1-201ENST00000355430 A0A1W2PRD5 423 aa10.58□□□□□ -0.72
COLCA1-201ENST00000355430 A0A1W2PRF3 423 aa10.58□□□□□ -0.72
COLCA1-201ENST00000355430 A0A1W2PRM7 423 aa10.58□□□□□ -0.72
COLCA1-201ENST00000355430 HRASP01112 189 aa10.58□□□□□ -0.72
COLCA1-201ENST00000355430 GYPAP02724 150 aa10.58□□□□□ -0.72
COLCA1-201ENST00000355430 FHL1Q13642 323 aa10.58□□□□□ -0.72
COLCA1-201ENST00000355430 GABRA6Q16445 453 aa10.58□□□□□ -0.72
COLCA1-201ENST00000355430 A0A0A6YYD4 124 aa10.57□□□□□ -0.72
COLCA1-201ENST00000355430 F8VVB4 439 aa10.57□□□□□ -0.72
COLCA1-201ENST00000355430 F8VWA3 439 aa10.57□□□□□ -0.72
COLCA1-201ENST00000355430 CA11O75493 328 aa10.57□□□□□ -0.72
COLCA1-201ENST00000355430 CCDC144NLQ6NUI1 221 aa10.57□□□□□ -0.72
COLCA1-201ENST00000355430 KDF1Q8NAX2 398 aaPredicted RBP10.57□□□□□ -0.72
COLCA1-201ENST00000355430 TMEM54Q969K7 222 aa10.57□□□□□ -0.72
COLCA1-201ENST00000355430 RASL11BQ9BPW5 248 aa10.57□□□□□ -0.72
COLCA1-201ENST00000355430 ZDHHC8Q9ULC8 765 aa10.57□□□□□ -0.72
COLCA1-201ENST00000355430 J3QT63 122 aa10.57□□□□□ -0.72
COLCA1-201ENST00000355430 SMAD7O15105 426 aaKnown RBP10.57□□□□□ -0.72
COLCA1-201ENST00000355430 FGF16O43320 207 aa10.57□□□□□ -0.72
COLCA1-201ENST00000355430 PGLYRP1O75594 196 aaPredicted RBP10.57□□□□□ -0.72
COLCA1-201ENST00000355430 GOSR1O95249 250 aa10.57□□□□□ -0.72
COLCA1-201ENST00000355430 CYB5R3P00387 301 aaPredicted RBP10.57□□□□□ -0.72
COLCA1-201ENST00000355430 CSN1S1P47710 185 aa10.57□□□□□ -0.72
COLCA1-201ENST00000355430 NPBWR2P48146 333 aa10.57□□□□□ -0.72
COLCA1-201ENST00000355430 GINS3Q9BRX5 216 aa10.57□□□□□ -0.72
COLCA1-201ENST00000355430 ASXL3Q9C0F0 2248 aa10.57□□□□□ -0.72
COLCA1-201ENST00000355430 CEACAM21Q3KPI0 293 aa10.57□□□□□ -0.72
COLCA1-201ENST00000355430 ZNF818PQ6ZRF7 136 aa10.57□□□□□ -0.72
COLCA1-201ENST00000355430 OR5B3Q8NH48 314 aa10.57□□□□□ -0.72
COLCA1-201ENST00000355430 LINC01560Q8TB33 94 aa10.57□□□□□ -0.72
COLCA1-201ENST00000355430 TMEM56Q96MV1 263 aa10.57□□□□□ -0.72
COLCA1-201ENST00000355430 RPL29P47914 159 aaKnown RBP10.57□□□□□ -0.72
COLCA1-201ENST00000355430 GPR146Q96CH1 333 aa10.57□□□□□ -0.72
COLCA1-201ENST00000355430 R3HDM4Q96D70 268 aa10.57□□□□□ -0.72
COLCA1-201ENST00000355430 PCGF1Q9BSM1 259 aa10.57□□□□□ -0.72
COLCA1-201ENST00000355430 TM2D1Q9BX74 207 aa10.57□□□□□ -0.72
COLCA1-201ENST00000355430 THYN1Q9P016 225 aa10.57□□□□□ -0.72
COLCA1-201ENST00000355430 KIAA1324LA8MWY0 1029 aaPredicted RBP10.56□□□□□ -0.72
COLCA1-201ENST00000355430 LINC00271P0C7V0 271 aa10.56□□□□□ -0.72
COLCA1-201ENST00000355430 KIR2DS2P43631 304 aa10.56□□□□□ -0.72
COLCA1-201ENST00000355430 UCP2P55851 309 aa10.56□□□□□ -0.72
COLCA1-201ENST00000355430 SSTP61278 116 aa10.56□□□□□ -0.72
COLCA1-201ENST00000355430 MRPL14Q6P1L8 145 aaKnown RBP10.56□□□□□ -0.72
COLCA1-201ENST00000355430 ACY3Q96HD9 319 aa10.56□□□□□ -0.72
COLCA1-201ENST00000355430 POM121L2Q96KW2 1035 aa10.56□□□□□ -0.72
COLCA1-201ENST00000355430 RHOVQ96L33 236 aa10.56□□□□□ -0.72
COLCA1-201ENST00000355430 SIGLEC12Q96PQ1 595 aa10.56□□□□□ -0.72
COLCA1-201ENST00000355430 FCN1O00602 326 aa10.56□□□□□ -0.72
COLCA1-201ENST00000355430 SYNGR1O43759 233 aa10.56□□□□□ -0.72
COLCA1-201ENST00000355430 ZNF343Q6P1L6 599 aa10.56□□□□□ -0.72
COLCA1-201ENST00000355430 SLC35E3Q7Z769 313 aa10.56□□□□□ -0.72
COLCA1-201ENST00000355430 LINC00596Q86U02 117 aa10.56□□□□□ -0.72
COLCA1-201ENST00000355430 VOPP1Q96AW1 172 aa10.56□□□□□ -0.72
COLCA1-201ENST00000355430 MSL2Q9HCI7 577 aa10.56□□□□□ -0.72
COLCA1-201ENST00000355430 ANAPC1Q9H1A4 1944 aa10.56□□□□□ -0.72
COLCA1-201ENST00000355430 SCN8AQ9UQD0 1980 aa10.56□□□□□ -0.72
COLCA1-201ENST00000355430 IGSF23A1L1A6 192 aa10.56□□□□□ -0.72
COLCA1-201ENST00000355430 B9A039 149 aa10.56□□□□□ -0.72
COLCA1-201ENST00000355430 CLN5O75503 358 aa10.56□□□□□ -0.72
COLCA1-201ENST00000355430 FOSL1P15407 271 aa10.56□□□□□ -0.72
COLCA1-201ENST00000355430 CCL8P80075 99 aa10.56□□□□□ -0.72
COLCA1-201ENST00000355430 ZNF703Q9H7S9 590 aaPredicted RBP10.56□□□□□ -0.72
COLCA1-201ENST00000355430 METTL1Q9UBP6 276 aaKnown RBP10.56□□□□□ -0.72
COLCA1-201ENST00000355430 NAT8BQ9UHF3 227 aa10.56□□□□□ -0.72
COLCA1-201ENST00000355430 FRMPD3Q5JV73 1810 aa10.56□□□□□ -0.72
COLCA1-201ENST00000355430 PLXNA2O75051 1894 aa10.56□□□□□ -0.72
COLCA1-201ENST00000355430 OOEPA6NGQ2 149 aa10.56□□□□□ -0.72
COLCA1-201ENST00000355430 IZUMO4Q1ZYL8 232 aa10.56□□□□□ -0.72
COLCA1-201ENST00000355430 CTXND1A0A1B0GTU2 59 aa10.55□□□□□ -0.72
COLCA1-201ENST00000355430 GATCO43716 136 aaKnown RBP10.55□□□□□ -0.72
COLCA1-201ENST00000355430 HABP2Q14520 560 aaPredicted RBP10.55□□□□□ -0.72
COLCA1-201ENST00000355430 C10orf128Q5T292 105 aa10.55□□□□□ -0.72
COLCA1-201ENST00000355430 RNF122Q9H9V4 155 aa10.55□□□□□ -0.72
COLCA1-201ENST00000355430 TUBD1Q9UJT1 453 aa10.55□□□□□ -0.72
COLCA1-201ENST00000355430 COX7A2P2O60397 106 aa10.55□□□□□ -0.72
COLCA1-201ENST00000355430 GFRA1P56159 465 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms