RNA–Protein interactions for RNA: ENST00000355086.7

SRGAP1-201, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP1, Length 23,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-201ENST00000355086 LHFPL5Q8TAF8 219 aa5.04□□□□□ -1.6
SRGAP1-201ENST00000355086 ZG16BQ96DA0 208 aa5.04□□□□□ -1.6
SRGAP1-201ENST00000355086 SFRP2Q96HF1 295 aa5.04□□□□□ -1.6
SRGAP1-201ENST00000355086 SNRPCP09234 159 aaKnown RBP5.04□□□□□ -1.6
SRGAP1-201ENST00000355086 IBA57Q5T440 356 aaKnown RBP5.04□□□□□ -1.6
SRGAP1-201ENST00000355086 PRELID3AQ96N28 172 aa5.04□□□□□ -1.6
SRGAP1-201ENST00000355086 SSTR5P35346 364 aa5.04□□□□□ -1.6
SRGAP1-201ENST00000355086 SPAG8Q99932 426 aaPredicted RBP5.04□□□□□ -1.6
SRGAP1-201ENST00000355086 PRSS27Q9BQR3 290 aa5.04□□□□□ -1.6
SRGAP1-201ENST00000355086 DOT1LQ8TEK3 1739 aa5.04□□□□□ -1.6
SRGAP1-201ENST00000355086 CTDSPLO15194 276 aa5.04□□□□□ -1.6
SRGAP1-201ENST00000355086 HSPB9Q9BQS6 159 aa5.04□□□□□ -1.6
SRGAP1-201ENST00000355086 ALG14Q96F25 216 aa5.04□□□□□ -1.6
SRGAP1-201ENST00000355086 C11orf68Q9H3H3 251 aaKnown RBP5.04□□□□□ -1.6
SRGAP1-201ENST00000355086 FAM3BP58499 235 aaPredicted RBP5.04□□□□□ -1.6
SRGAP1-201ENST00000355086 WNT5BQ9H1J7 359 aa5.04□□□□□ -1.6
SRGAP1-201ENST00000355086 ZFP36L2P47974 494 aaKnown RBP5.04□□□□□ -1.6
SRGAP1-201ENST00000355086 FBXW9Q5XUX1 488 aa5.04□□□□□ -1.6
SRGAP1-201ENST00000355086 MARVELD1Q9BSK0 173 aa5.04□□□□□ -1.6
SRGAP1-201ENST00000355086 WIPI2Q9Y4P8 454 aa5.04□□□□□ -1.6
SRGAP1-201ENST00000355086 CXorf51AA0A1B0GTR3 108 aa5.04□□□□□ -1.6
SRGAP1-201ENST00000355086 C7orf71A4D174 169 aa5.04□□□□□ -1.6
SRGAP1-201ENST00000355086 GAB4Q2WGN9 574 aa5.04□□□□□ -1.6
SRGAP1-201ENST00000355086 UNQ5815/PRO19632Q6UWF5 114 aa5.04□□□□□ -1.6
SRGAP1-201ENST00000355086 MRPL24Q96A35 216 aaKnown RBP5.04□□□□□ -1.6
SRGAP1-201ENST00000355086 R3HDMLQ9H3Y0 253 aa5.04□□□□□ -1.6
SRGAP1-201ENST00000355086 PXMP4Q9Y6I8 212 aa5.04□□□□□ -1.6
SRGAP1-201ENST00000355086 RPS20P60866 119 aaKnown RBP5.04□□□□□ -1.6
SRGAP1-201ENST00000355086 MBD3L1Q8WWY6 194 aa5.04□□□□□ -1.6
SRGAP1-201ENST00000355086 A0A1W2PPE3 182 aa5.04□□□□□ -1.6
SRGAP1-201ENST00000355086 HDHD3Q9BSH5 251 aaPredicted RBP5.04□□□□□ -1.6
SRGAP1-201ENST00000355086 C4BP0C0L5 1744 aa5.04□□□□□ -1.6
SRGAP1-201ENST00000355086 CA11O75493 328 aa5.04□□□□□ -1.6
SRGAP1-201ENST00000355086 OR2A4O95047 310 aa5.04□□□□□ -1.6
SRGAP1-201ENST00000355086 FAM74A4Q5TZK3 123 aa5.04□□□□□ -1.6
SRGAP1-201ENST00000355086 OR2A7Q96R45 310 aa5.04□□□□□ -1.6
SRGAP1-201ENST00000355086 RAB33BQ9H082 229 aa5.04□□□□□ -1.6
SRGAP1-201ENST00000355086 RPL36A-HNRNPH2H7BZ11 118 aa5.04□□□□□ -1.6
SRGAP1-201ENST00000355086 IGKV3-20P01619 116 aa5.04□□□□□ -1.6
SRGAP1-201ENST00000355086 PNLIPP16233 465 aa5.04□□□□□ -1.6
SRGAP1-201ENST00000355086 LRRC3BQ96PB8 259 aa5.04□□□□□ -1.6
SRGAP1-201ENST00000355086 GPX1P07203 203 aa5.04□□□□□ -1.6
SRGAP1-201ENST00000355086 MFAP4P55083 255 aa5.04□□□□□ -1.6
SRGAP1-201ENST00000355086 OVCH2Q7RTZ1 564 aa5.04□□□□□ -1.6
SRGAP1-201ENST00000355086 C1orf174Q8IYL3 243 aa5.04□□□□□ -1.6
SRGAP1-201ENST00000355086 CCL13Q99616 98 aa5.04□□□□□ -1.6
SRGAP1-201ENST00000355086 CCL19Q99731 98 aa5.04□□□□□ -1.6
SRGAP1-201ENST00000355086 MCM3APO60318 1980 aa5.04□□□□□ -1.6
SRGAP1-201ENST00000355086 RGPD1P0DJD0 1748 aa5.03□□□□□ -1.6
SRGAP1-201ENST00000355086 UBE2V2Q15819 145 aa5.03□□□□□ -1.6
SRGAP1-201ENST00000355086 LY6EQ16553 131 aa5.03□□□□□ -1.6
SRGAP1-201ENST00000355086 CD300LDQ6UXZ3 194 aa5.03□□□□□ -1.6
SRGAP1-201ENST00000355086 IL36RNQ9UBH0 155 aa5.03□□□□□ -1.6
SRGAP1-201ENST00000355086 ATP6V0CP27449 155 aa5.03□□□□□ -1.6
SRGAP1-201ENST00000355086 SELENOTP62341 195 aa5.03□□□□□ -1.6
SRGAP1-201ENST00000355086 ATP5G2Q06055 141 aa5.03□□□□□ -1.6
SRGAP1-201ENST00000355086 PAPPA-AS1Q5QFB9 102 aa5.03□□□□□ -1.6
SRGAP1-201ENST00000355086 LINC01555Q8NAE3 123 aa5.03□□□□□ -1.6
SRGAP1-201ENST00000355086 MYOFQ9NZM1 2061 aa5.03□□□□□ -1.6
SRGAP1-201ENST00000355086 A0A1W2PQM1 296 aa5.03□□□□□ -1.6
SRGAP1-201ENST00000355086 HPRT1P00492 218 aa5.03□□□□□ -1.6
SRGAP1-201ENST00000355086 OR4D5Q8NGN0 318 aa5.03□□□□□ -1.6
SRGAP1-201ENST00000355086 DNASE2BQ8WZ79 361 aa5.03□□□□□ -1.6
SRGAP1-201ENST00000355086 LEPROTL1O95214 131 aa5.03□□□□□ -1.6
SRGAP1-201ENST00000355086 TMEM92Q6UXU6 159 aa5.03□□□□□ -1.6
SRGAP1-201ENST00000355086 C12orf54Q6X4T0 127 aa5.03□□□□□ -1.6
SRGAP1-201ENST00000355086 CBLN2Q8IUK8 224 aa5.03□□□□□ -1.6
SRGAP1-201ENST00000355086 A0A1W2PQD3 144 aa5.03□□□□□ -1.6
SRGAP1-201ENST00000355086 C17orf51A8MQB3 221 aa5.03□□□□□ -1.6
SRGAP1-201ENST00000355086 SMIM6P0DI80 62 aa5.03□□□□□ -1.6
SRGAP1-201ENST00000355086 CCL4P13236 92 aa5.03□□□□□ -1.6
SRGAP1-201ENST00000355086 MYO7BQ6PIF6 2116 aa5.03□□□□□ -1.6
SRGAP1-201ENST00000355086 RPP25Q9BUL9 199 aaKnown RBP5.03□□□□□ -1.6
SRGAP1-201ENST00000355086 GDF9O60383 454 aa5.03□□□□□ -1.6
SRGAP1-201ENST00000355086 RECKO95980 971 aa5.03□□□□□ -1.6
SRGAP1-201ENST00000355086 MVDP53602 400 aa5.03□□□□□ -1.6
SRGAP1-201ENST00000355086 DLL1O00548 723 aa5.03□□□□□ -1.6
SRGAP1-201ENST00000355086 PCSK4Q6UW60 755 aa5.03□□□□□ -1.6
SRGAP1-201ENST00000355086 TMPRSS3P57727 454 aa5.03□□□□□ -1.6
SRGAP1-201ENST00000355086 TCRBV16S1A1N1A0A5B0 115 aa5.03□□□□□ -1.6
SRGAP1-201ENST00000355086 LINC00869P0C866 280 aa5.03□□□□□ -1.6
SRGAP1-201ENST00000355086 PSG9Q00887 426 aa5.03□□□□□ -1.6
SRGAP1-201ENST00000355086 MGAT2Q10469 447 aa5.03□□□□□ -1.6
SRGAP1-201ENST00000355086 PGPA6NDG6 321 aa5.03□□□□□ -1.6
SRGAP1-201ENST00000355086 IL4P05112 153 aa5.03□□□□□ -1.6
SRGAP1-201ENST00000355086 TRGC1P0CF51 173 aa5.03□□□□□ -1.6
SRGAP1-201ENST00000355086 FOLR2P14207 255 aa5.03□□□□□ -1.6
SRGAP1-201ENST00000355086 RELQ04864 619 aaPredicted RBP5.03□□□□□ -1.6
SRGAP1-201ENST00000355086 TMEM177Q53S58 311 aa5.03□□□□□ -1.6
SRGAP1-201ENST00000355086 MBNL2Q5VZF2 373 aaKnown RBP5.03□□□□□ -1.6
SRGAP1-201ENST00000355086 NACAE9PAV3 2078 aa5.03□□□□□ -1.6
SRGAP1-201ENST00000355086 PMS2CLQ68D20 193 aa5.03□□□□□ -1.6
SRGAP1-201ENST00000355086 SPNS2Q8IVW8 549 aa5.03□□□□□ -1.6
SRGAP1-201ENST00000355086 NDUFB4O95168 129 aa5.03□□□□□ -1.6
SRGAP1-201ENST00000355086 THY1P04216 161 aa5.03□□□□□ -1.6
SRGAP1-201ENST00000355086 TCF24Q7RTU0 167 aa5.03□□□□□ -1.6
SRGAP1-201ENST00000355086 LRRC37A3O60309 1634 aa5.03□□□□□ -1.6
SRGAP1-201ENST00000355086 NAT2P11245 290 aa5.03□□□□□ -1.6
SRGAP1-201ENST00000355086 ABHD1Q96SE0 405 aa5.03□□□□□ -1.6
SRGAP1-201ENST00000355086 KNDC1Q76NI1 1749 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms