RNA–Protein interactions for RNA: ENST00000351487.5

UPF3A-201, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-201ENST00000351487 CATR1Q13166 79 aa18.55■□□□□ 0.56
UPF3A-201ENST00000351487 OR52L2PQ8NGH6 319 aa18.55■□□□□ 0.56
UPF3A-201ENST00000351487 HSPB7Q9UBY9 170 aa18.55■□□□□ 0.56
UPF3A-201ENST00000351487 USF3Q68DE3 2245 aa18.55■□□□□ 0.56
UPF3A-201ENST00000351487 INTS1Q8N201 2190 aaKnown RBP18.55■□□□□ 0.56
UPF3A-201ENST00000351487 LOC102723971A0A1B0GUV8 181 aa18.55■□□□□ 0.56
UPF3A-201ENST00000351487 SPAARA0A1B0GVQ0 90 aa18.55■□□□□ 0.56
UPF3A-201ENST00000351487 RAMP3O60896 148 aa18.55■□□□□ 0.56
UPF3A-201ENST00000351487 PAX5Q02548 391 aa18.55■□□□□ 0.56
UPF3A-201ENST00000351487 SMIM21Q3B7S5 101 aa18.55■□□□□ 0.56
UPF3A-201ENST00000351487 ZNF718Q3SXZ3 478 aa18.55■□□□□ 0.56
UPF3A-201ENST00000351487 TMEM14EPQ6UXP3 125 aa18.55■□□□□ 0.56
UPF3A-201ENST00000351487 C1orf174Q8IYL3 243 aa18.55■□□□□ 0.56
UPF3A-201ENST00000351487 LILRB2Q8N423 598 aa18.55■□□□□ 0.56
UPF3A-201ENST00000351487 FAM24BQ8N5W8 94 aa18.55■□□□□ 0.56
UPF3A-201ENST00000351487 CYB561D1Q8N8Q1 229 aa18.55■□□□□ 0.56
UPF3A-201ENST00000351487 MBD3L1Q8WWY6 194 aa18.55■□□□□ 0.56
UPF3A-201ENST00000351487 CACNA1HO95180 2353 aa18.55■□□□□ 0.56
UPF3A-201ENST00000351487 PRR14LQ5THK1 2151 aa18.55■□□□□ 0.56
UPF3A-201ENST00000351487 PTBP3O95758 552 aaKnown RBP18.54■□□□□ 0.56
UPF3A-201ENST00000351487 RPL30P62888 115 aaKnown RBP18.54■□□□□ 0.56
UPF3A-201ENST00000351487 TCTEX1D1Q8N7M0 179 aa18.54■□□□□ 0.56
UPF3A-201ENST00000351487 NINJ1Q92982 152 aa18.54■□□□□ 0.56
UPF3A-201ENST00000351487 WDR61Q9GZS3 305 aaKnown RBP18.54■□□□□ 0.56
UPF3A-201ENST00000351487 PARD6AQ9NPB6 346 aa18.54■□□□□ 0.56
UPF3A-201ENST00000351487 A0A087WWC5 75 aa18.54■□□□□ 0.56
UPF3A-201ENST00000351487 IGHV2OR16-5A0A0B4J2B6 119 aa18.54■□□□□ 0.56
UPF3A-201ENST00000351487 AHRRA9YTQ3 701 aa18.54■□□□□ 0.56
UPF3A-201ENST00000351487 TNFSF13O75888 250 aa18.54■□□□□ 0.56
UPF3A-201ENST00000351487 GABRA2P47869 451 aa18.54■□□□□ 0.56
UPF3A-201ENST00000351487 HOXA4Q00056 320 aaPredicted RBP18.54■□□□□ 0.56
UPF3A-201ENST00000351487 SPANXN5Q5MJ07 72 aa18.54■□□□□ 0.56
UPF3A-201ENST00000351487 MRGPRDQ8TDS7 321 aa18.54■□□□□ 0.56
UPF3A-201ENST00000351487 RAB39BQ96DA2 213 aa18.54■□□□□ 0.56
UPF3A-201ENST00000351487 LURAP1Q96LR2 239 aa18.54■□□□□ 0.56
UPF3A-201ENST00000351487 CHD3Q12873 2000 aaKnown RBP18.53■□□□□ 0.56
UPF3A-201ENST00000351487 hCG_1809904A0A1W2PP81 198 aa18.53■□□□□ 0.56
UPF3A-201ENST00000351487 A0A1W2PR64 198 aa18.53■□□□□ 0.56
UPF3A-201ENST00000351487 A0A1W2PRV1 198 aa18.53■□□□□ 0.56
UPF3A-201ENST00000351487 C5orf52A6NGY3 159 aa18.53■□□□□ 0.56
UPF3A-201ENST00000351487 GALR2O43603 387 aaPredicted RBP18.53■□□□□ 0.56
UPF3A-201ENST00000351487 GCH1P30793 250 aa18.53■□□□□ 0.56
UPF3A-201ENST00000351487 RBKSQ9H477 322 aa18.53■□□□□ 0.56
UPF3A-201ENST00000351487 MSL2Q9HCI7 577 aa18.53■□□□□ 0.56
UPF3A-201ENST00000351487 ZNF71Q9NQZ8 489 aaPredicted RBP18.53■□□□□ 0.56
UPF3A-201ENST00000351487 IGHV1-18A0A0C4DH31 117 aa18.53■□□□□ 0.56
UPF3A-201ENST00000351487 FABP6P51161 128 aa18.53■□□□□ 0.56
UPF3A-201ENST00000351487 COL10A1Q03692 680 aa18.53■□□□□ 0.56
UPF3A-201ENST00000351487 ZNF726P1Q15940 193 aa18.53■□□□□ 0.56
UPF3A-201ENST00000351487 FAM53AQ6NSI3 398 aaPredicted RBP18.53■□□□□ 0.56
UPF3A-201ENST00000351487 IGF2-ASQ6U949 168 aa18.53■□□□□ 0.56
UPF3A-201ENST00000351487 ZNF429Q86V71 674 aa18.53■□□□□ 0.56
UPF3A-201ENST00000351487 FAM169BQ8N8A8 192 aa18.53■□□□□ 0.56
UPF3A-201ENST00000351487 VSIRQ9H7M9 311 aa18.53■□□□□ 0.56
UPF3A-201ENST00000351487 UFSP2Q9NUQ7 469 aa18.53■□□□□ 0.56
UPF3A-201ENST00000351487 DKK4Q9UBT3 224 aa18.53■□□□□ 0.56
UPF3A-201ENST00000351487 FRYQ5TBA9 3013 aa18.53■□□□□ 0.56
UPF3A-201ENST00000351487 PTPRBP23467 1997 aa18.52■□□□□ 0.56
UPF3A-201ENST00000351487 OTOGLQ3ZCN5 2332 aa18.52■□□□□ 0.56
UPF3A-201ENST00000351487 OR2C1O95371 312 aa18.52■□□□□ 0.56
UPF3A-201ENST00000351487 CGAP01215 116 aa18.52■□□□□ 0.56
UPF3A-201ENST00000351487 SNRPEP62304 92 aaKnown RBP18.52■□□□□ 0.56
UPF3A-201ENST00000351487 P2RY6Q15077 328 aa18.52■□□□□ 0.56
UPF3A-201ENST00000351487 EIF2S3LQ2VIR3 472 aaKnown RBP18.52■□□□□ 0.56
UPF3A-201ENST00000351487 MUCL1Q96DR8 90 aa18.52■□□□□ 0.56
UPF3A-201ENST00000351487 OR4C12Q96R67 309 aa18.52■□□□□ 0.56
UPF3A-201ENST00000351487 FZR1Q9UM11 496 aa18.52■□□□□ 0.56
UPF3A-201ENST00000351487 DIDO1Q9BTC0 2240 aaKnown RBP18.52■□□□□ 0.56
UPF3A-201ENST00000351487 G6PCP35575 357 aa18.51■□□□□ 0.55
UPF3A-201ENST00000351487 BRWD1-AS2P59051 145 aa18.51■□□□□ 0.55
UPF3A-201ENST00000351487 SLC38A11Q08AI6 406 aa18.51■□□□□ 0.55
UPF3A-201ENST00000351487 ZNF787Q6DD87 383 aa18.51■□□□□ 0.55
UPF3A-201ENST00000351487 SLC35E3Q7Z769 313 aa18.51■□□□□ 0.55
UPF3A-201ENST00000351487 ZNF808Q8N4W9 903 aaPredicted RBP18.51■□□□□ 0.55
UPF3A-201ENST00000351487 ZNF610Q8N9Z0 462 aa18.51■□□□□ 0.55
UPF3A-201ENST00000351487 PINX1Q96BK5 328 aaKnown RBP18.51■□□□□ 0.55
UPF3A-201ENST00000351487 RCC1LQ96I51 464 aaKnown RBP18.51■□□□□ 0.55
UPF3A-201ENST00000351487 C12orf57Q99622 126 aa18.51■□□□□ 0.55
UPF3A-201ENST00000351487 NIPSNAP3BQ9BS92 247 aa18.51■□□□□ 0.55
UPF3A-201ENST00000351487 CISD1Q9NZ45 108 aaKnown RBP18.51■□□□□ 0.55
UPF3A-201ENST00000351487 METRNQ9UJH8 293 aa18.51■□□□□ 0.55
UPF3A-201ENST00000351487 PROCRQ9UNN8 238 aa18.51■□□□□ 0.55
UPF3A-201ENST00000351487 LRRC30A6NM36 301 aa18.51■□□□□ 0.55
UPF3A-201ENST00000351487 UBE2CO00762 179 aa18.51■□□□□ 0.55
UPF3A-201ENST00000351487 CEACAM4O75871 244 aa18.51■□□□□ 0.55
UPF3A-201ENST00000351487 FBP1P09467 338 aa18.51■□□□□ 0.55
UPF3A-201ENST00000351487 GLIPR1P48060 266 aa18.51■□□□□ 0.55
UPF3A-201ENST00000351487 CACNA1DQ01668 2161 aa18.51■□□□□ 0.55
UPF3A-201ENST00000351487 MZT1Q08AG7 82 aa18.51■□□□□ 0.55
UPF3A-201ENST00000351487 OR13A1Q8NGR1 328 aa18.51■□□□□ 0.55
UPF3A-201ENST00000351487 STARD4Q96DR4 205 aa18.51■□□□□ 0.55
UPF3A-201ENST00000351487 TVP23CQ96ET8 276 aa18.51■□□□□ 0.55
UPF3A-201ENST00000351487 TIMM9Q9Y5J7 89 aa18.51■□□□□ 0.55
UPF3A-201ENST00000351487 ODAMA1E959 279 aa18.5■□□□□ 0.55
UPF3A-201ENST00000351487 OR5H1A6NKK0 313 aa18.5■□□□□ 0.55
UPF3A-201ENST00000351487 S1PR2O95136 353 aa18.5■□□□□ 0.55
UPF3A-201ENST00000351487 CLDN1O95832 211 aa18.5■□□□□ 0.55
UPF3A-201ENST00000351487 KRASP01116 189 aa18.5■□□□□ 0.55
UPF3A-201ENST00000351487 TFF1P04155 84 aa18.5■□□□□ 0.55
UPF3A-201ENST00000351487 BCL2P10415 239 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms