RNA–Protein interactions for RNA: ENST00000348749.9

CHRNA1-202, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA1, Length 1,984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-202ENST00000348749 SZT2Q5T011 3432 aa8.79□□□□□ -1
CHRNA1-202ENST00000348749 SHANK1Q9Y566 2161 aa8.78□□□□□ -1
CHRNA1-202ENST00000348749 IGKV1D-13A0A0B4J2D9 117 aa8.78□□□□□ -1
CHRNA1-202ENST00000348749 F6UZH7 168 aa8.78□□□□□ -1
CHRNA1-202ENST00000348749 PGLYRP1O75594 196 aaPredicted RBP8.78□□□□□ -1
CHRNA1-202ENST00000348749 SERF1AO75920 110 aa8.78□□□□□ -1
CHRNA1-202ENST00000348749 TIAF1O95411 115 aa8.78□□□□□ -1
CHRNA1-202ENST00000348749 NRASP01111 189 aa8.78□□□□□ -1
CHRNA1-202ENST00000348749 KRASP01116 189 aa8.78□□□□□ -1
CHRNA1-202ENST00000348749 IGKV1-13P0DP09 117 aa8.78□□□□□ -1
CHRNA1-202ENST00000348749 HNF1AP20823 631 aa8.78□□□□□ -1
CHRNA1-202ENST00000348749 F2RP25116 425 aa8.78□□□□□ -1
CHRNA1-202ENST00000348749 CEACAM8P31997 349 aaPredicted RBP8.78□□□□□ -1
CHRNA1-202ENST00000348749 Q0VG73 95 aa8.78□□□□□ -1
CHRNA1-202ENST00000348749 DEFB123Q8N688 67 aa8.78□□□□□ -1
CHRNA1-202ENST00000348749 Q8N976 141 aa8.78□□□□□ -1
CHRNA1-202ENST00000348749 SMRP1Q8NCR6 262 aa8.78□□□□□ -1
CHRNA1-202ENST00000348749 Q8NFD4 153 aa8.78□□□□□ -1
CHRNA1-202ENST00000348749 RLN3Q8WXF3 142 aa8.78□□□□□ -1
CHRNA1-202ENST00000348749 OR5P3Q8WZ94 311 aa8.78□□□□□ -1
CHRNA1-202ENST00000348749 LSM10Q969L4 123 aaKnown RBP8.78□□□□□ -1
CHRNA1-202ENST00000348749 ALKBH3Q96Q83 286 aaPredicted RBP8.78□□□□□ -1
CHRNA1-202ENST00000348749 ALKBH7Q9BT30 221 aaPredicted RBP8.78□□□□□ -1
CHRNA1-202ENST00000348749 DEFB126Q9BYW3 111 aa8.78□□□□□ -1
CHRNA1-202ENST00000348749 STRADBQ9C0K7 418 aa8.78□□□□□ -1
CHRNA1-202ENST00000348749 ZDHHC11Q9H8X9 412 aa8.78□□□□□ -1
CHRNA1-202ENST00000348749 GRIFINA4D1Z8 144 aa8.77□□□□□ -1
CHRNA1-202ENST00000348749 GALR2O43603 387 aaPredicted RBP8.77□□□□□ -1
CHRNA1-202ENST00000348749 SYNGR3O43761 229 aa8.77□□□□□ -1
CHRNA1-202ENST00000348749 CRISP2P16562 243 aa8.77□□□□□ -1
CHRNA1-202ENST00000348749 SNAI3Q3KNW1 292 aa8.77□□□□□ -1
CHRNA1-202ENST00000348749 OR8G2PQ6IF36 304 aa8.77□□□□□ -1
CHRNA1-202ENST00000348749 FAM180AQ6UWF9 173 aa8.77□□□□□ -1
CHRNA1-202ENST00000348749 ULBP2Q9BZM5 246 aa8.77□□□□□ -1
CHRNA1-202ENST00000348749 ZNF442Q9H7R0 627 aa8.77□□□□□ -1
CHRNA1-202ENST00000348749 ZNF703Q9H7S9 590 aaPredicted RBP8.77□□□□□ -1
CHRNA1-202ENST00000348749 PATZ1Q9HBE1 687 aaKnown RBP8.77□□□□□ -1
CHRNA1-202ENST00000348749 PRDM6Q9NQX0 595 aa8.77□□□□□ -1
CHRNA1-202ENST00000348749 CCL28Q9NRJ3 127 aa8.77□□□□□ -1
CHRNA1-202ENST00000348749 PLA2G3Q9NZ20 509 aa8.77□□□□□ -1
CHRNA1-202ENST00000348749 CHCHD2Q9Y6H1 151 aaPredicted RBP8.77□□□□□ -1
CHRNA1-202ENST00000348749 COX11Q9Y6N1 276 aa8.77□□□□□ -1
CHRNA1-202ENST00000348749 UNC13CQ8NB66 2214 aa8.77□□□□□ -1.01
CHRNA1-202ENST00000348749 LOC105371242A0A075B767 164 aa8.77□□□□□ -1.01
CHRNA1-202ENST00000348749 GJE1A6NN92 205 aa8.77□□□□□ -1.01
CHRNA1-202ENST00000348749 PDE6DO43924 150 aa8.77□□□□□ -1.01
CHRNA1-202ENST00000348749 TRAPPC6AO75865 159 aa8.77□□□□□ -1.01
CHRNA1-202ENST00000348749 CTXN2P0C2S0 81 aa8.77□□□□□ -1.01
CHRNA1-202ENST00000348749 IGLC2P0DOY2 106 aa8.77□□□□□ -1.01
CHRNA1-202ENST00000348749 IGLC3P0DOY3 106 aa8.77□□□□□ -1.01
CHRNA1-202ENST00000348749 NPPCP23582 126 aa8.77□□□□□ -1.01
CHRNA1-202ENST00000348749 S100GP29377 79 aa8.77□□□□□ -1.01
CHRNA1-202ENST00000348749 DSCR4P56555 118 aaPredicted RBP8.77□□□□□ -1.01
CHRNA1-202ENST00000348749 UBE2G2P60604 165 aa8.77□□□□□ -1.01
CHRNA1-202ENST00000348749 SUMO1P63165 101 aaKnown RBP8.77□□□□□ -1.01
CHRNA1-202ENST00000348749 DAZAP2Q15038 168 aaPredicted RBP8.77□□□□□ -1.01
CHRNA1-202ENST00000348749 SPATA45Q537H7 98 aa8.77□□□□□ -1.01
CHRNA1-202ENST00000348749 PHYHD1Q5SRE7 291 aa8.77□□□□□ -1.01
CHRNA1-202ENST00000348749 ACSM6Q6P461 480 aa8.77□□□□□ -1.01
CHRNA1-202ENST00000348749 LYG1Q8N1E2 194 aa8.77□□□□□ -1.01
CHRNA1-202ENST00000348749 ZNF738Q8NE65 137 aa8.77□□□□□ -1.01
CHRNA1-202ENST00000348749 OR1F12Q8NHA8 337 aa8.77□□□□□ -1.01
CHRNA1-202ENST00000348749 SGMS2Q8NHU3 365 aa8.77□□□□□ -1.01
CHRNA1-202ENST00000348749 GATAD1Q8WUU5 269 aa8.77□□□□□ -1.01
CHRNA1-202ENST00000348749 FAM122AQ96E09 287 aa8.77□□□□□ -1.01
CHRNA1-202ENST00000348749 GMPPAQ96IJ6 420 aaPredicted RBP8.77□□□□□ -1.01
CHRNA1-202ENST00000348749 GPHA2Q96T91 129 aa8.77□□□□□ -1.01
CHRNA1-202ENST00000348749 ZPBPQ9BS86 351 aa8.77□□□□□ -1.01
CHRNA1-202ENST00000348749 RBM24Q9BX46 236 aaKnown RBP8.77□□□□□ -1.01
CHRNA1-202ENST00000348749 SLC25A22Q9H936 323 aa8.77□□□□□ -1.01
CHRNA1-202ENST00000348749 UBE2L5PA0A1B0GUS4 154 aa8.76□□□□□ -1.01
CHRNA1-202ENST00000348749 PAGE4O60829 102 aa8.76□□□□□ -1.01
CHRNA1-202ENST00000348749 HYPMO75409 117 aa8.76□□□□□ -1.01
CHRNA1-202ENST00000348749 IAPPP10997 89 aa8.76□□□□□ -1.01
CHRNA1-202ENST00000348749 HNRNPA3P51991 378 aaKnown RBP8.76□□□□□ -1.01
CHRNA1-202ENST00000348749 ETFRF1Q6IPR1 90 aa8.76□□□□□ -1.01
CHRNA1-202ENST00000348749 TCF23Q7RTU1 214 aa8.76□□□□□ -1.01
CHRNA1-202ENST00000348749 SMIM15Q7Z3B0 74 aa8.76□□□□□ -1.01
CHRNA1-202ENST00000348749 GCNT2Q8N0V5 402 aa8.76□□□□□ -1.01
CHRNA1-202ENST00000348749 ZNF709Q8N972 641 aa8.76□□□□□ -1.01
CHRNA1-202ENST00000348749 OR1L6Q8NGR2 347 aa8.76□□□□□ -1.01
CHRNA1-202ENST00000348749 CPT1CQ8TCG5 803 aa8.76□□□□□ -1.01
CHRNA1-202ENST00000348749 SFRP2Q96HF1 295 aa8.76□□□□□ -1.01
CHRNA1-202ENST00000348749 ZNF586Q9NXT0 402 aa8.76□□□□□ -1.01
CHRNA1-202ENST00000348749 FBXL7Q9UJT9 491 aa8.76□□□□□ -1.01
CHRNA1-202ENST00000348749 KIAA1549Q9HCM3 1950 aa8.76□□□□□ -1.01
CHRNA1-202ENST00000348749 IGHV2-70DA0A0C4DH43 119 aa8.75□□□□□ -1.01
CHRNA1-202ENST00000348749 C1QTNF9BB2RNN3 333 aa8.75□□□□□ -1.01
CHRNA1-202ENST00000348749 C2CD4DB7Z1M9 353 aa8.75□□□□□ -1.01
CHRNA1-202ENST00000348749 DIRC3C9JPN6 131 aa8.75□□□□□ -1.01
CHRNA1-202ENST00000348749 SCRG1O75711 98 aa8.75□□□□□ -1.01
CHRNA1-202ENST00000348749 CBR3O75828 277 aa8.75□□□□□ -1.01
CHRNA1-202ENST00000348749 NAPSAO96009 420 aa8.75□□□□□ -1.01
CHRNA1-202ENST00000348749 SCTP09683 121 aa8.75□□□□□ -1.01
CHRNA1-202ENST00000348749 LTBRP36941 435 aa8.75□□□□□ -1.01
CHRNA1-202ENST00000348749 CLDN15P56746 228 aa8.75□□□□□ -1.01
CHRNA1-202ENST00000348749 RPS20P60866 119 aaKnown RBP8.75□□□□□ -1.01
CHRNA1-202ENST00000348749 PCBD1P61457 104 aa8.75□□□□□ -1.01
CHRNA1-202ENST00000348749 SLC38A11Q08AI6 406 aa8.75□□□□□ -1.01
CHRNA1-202ENST00000348749 Q6ZRM9 215 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms