RNA–Protein interactions for RNA: ENST00000345851.7

TRIM3-201, Transcript of tripartite motif containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM3, Length 2,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-201ENST00000345851 GAGE1Q13065 139 aa18.19■□□□□ 0.5
TRIM3-201ENST00000345851 PINX1Q96BK5 328 aaKnown RBP18.19■□□□□ 0.5
TRIM3-201ENST00000345851 MANBALQ9NQG1 85 aa18.19■□□□□ 0.5
TRIM3-201ENST00000345851 TMEM250H0YL14 139 aa18.18■□□□□ 0.5
TRIM3-201ENST00000345851 M0R296 226 aa18.18■□□□□ 0.5
TRIM3-201ENST00000345851 ZNF16P17020 682 aaPredicted RBP18.18■□□□□ 0.5
TRIM3-201ENST00000345851 BCL3P20749 454 aa18.18■□□□□ 0.5
TRIM3-201ENST00000345851 ACSM6Q6P461 480 aa18.18■□□□□ 0.5
TRIM3-201ENST00000345851 OR1F12Q8NHA8 337 aa18.18■□□□□ 0.5
TRIM3-201ENST00000345851 SYNGR3O43761 229 aa18.18■□□□□ 0.5
TRIM3-201ENST00000345851 PAGE4O60829 102 aa18.18■□□□□ 0.5
TRIM3-201ENST00000345851 PRR18Q8N4B5 295 aa18.18■□□□□ 0.5
TRIM3-201ENST00000345851 TUSC2O75896 110 aa18.17■□□□□ 0.5
TRIM3-201ENST00000345851 TYMSP04818 313 aa18.17■□□□□ 0.5
TRIM3-201ENST00000345851 B4GALT1P15291 398 aa18.17■□□□□ 0.5
TRIM3-201ENST00000345851 SLC23A3Q6PIS1 610 aa18.17■□□□□ 0.5
TRIM3-201ENST00000345851 IL36GQ9NZH8 169 aa18.17■□□□□ 0.5
TRIM3-201ENST00000345851 TCF21O43680 179 aa18.17■□□□□ 0.5
TRIM3-201ENST00000345851 LINC00614P0C842 121 aa18.17■□□□□ 0.5
TRIM3-201ENST00000345851 ZNF32P17041 273 aa18.17■□□□□ 0.5
TRIM3-201ENST00000345851 SRP14P37108 136 aaKnown RBP18.17■□□□□ 0.5
TRIM3-201ENST00000345851 TRA2AQ13595 282 aaKnown RBP eCLIP18.17■□□□□ 0.5
TRIM3-201ENST00000345851 PEAR1Q5VY43 1037 aaPredicted RBP18.17■□□□□ 0.5
TRIM3-201ENST00000345851 TMEM42Q69YG0 159 aa18.17■□□□□ 0.5
TRIM3-201ENST00000345851 AGBL5Q8NDL9 886 aa18.17■□□□□ 0.5
TRIM3-201ENST00000345851 MPLP40238 635 aa18.16■□□□□ 0.5
TRIM3-201ENST00000345851 R4GN57 208 aa18.16■□□□□ 0.5
TRIM3-201ENST00000345851 C3orf80F5H4A9 247 aa18.16■□□□□ 0.5
TRIM3-201ENST00000345851 NTN3O00634 580 aaPredicted RBP18.16■□□□□ 0.5
TRIM3-201ENST00000345851 IGKV1-39P01597 117 aa18.16■□□□□ 0.5
TRIM3-201ENST00000345851 IGKV1D-39P04432 117 aa18.16■□□□□ 0.5
TRIM3-201ENST00000345851 RPL15P61313 204 aaKnown RBP18.16■□□□□ 0.5
TRIM3-201ENST00000345851 RPS16P62249 146 aaKnown RBP18.16■□□□□ 0.5
TRIM3-201ENST00000345851 SLC38A11Q08AI6 406 aa18.16■□□□□ 0.5
TRIM3-201ENST00000345851 FAM27BQ5VT28 67 aa18.16■□□□□ 0.5
TRIM3-201ENST00000345851 MRPL14Q6P1L8 145 aaKnown RBP18.16■□□□□ 0.5
TRIM3-201ENST00000345851 CMTM2Q8TAZ6 248 aa18.16■□□□□ 0.5
TRIM3-201ENST00000345851 IL1F10Q8WWZ1 152 aa18.16■□□□□ 0.5
TRIM3-201ENST00000345851 OR2J1Q9GZK6 312 aa18.16■□□□□ 0.5
TRIM3-201ENST00000345851 ERRFI1Q9UJM3 462 aaPredicted RBP18.16■□□□□ 0.5
TRIM3-201ENST00000345851 DMXL1Q9Y485 3027 aa18.16■□□□□ 0.5
TRIM3-201ENST00000345851 FOXL2NBQ6ZUU3 175 aa18.16■□□□□ 0.5
TRIM3-201ENST00000345851 MIEN1Q9BRT3 115 aa18.16■□□□□ 0.5
TRIM3-201ENST00000345851 PATZ1Q9HBE1 687 aaKnown RBP18.16■□□□□ 0.5
TRIM3-201ENST00000345851 LOC102725191A0A1B0GVB3 256 aa18.15■□□□□ 0.5
TRIM3-201ENST00000345851 PGPEP1LA6NFU8 196 aa18.15■□□□□ 0.5
TRIM3-201ENST00000345851 G3V3Y1 287 aa18.15■□□□□ 0.5
TRIM3-201ENST00000345851 NAPSAO96009 420 aa18.15■□□□□ 0.5
TRIM3-201ENST00000345851 CRYAAP02489 173 aa18.15■□□□□ 0.5
TRIM3-201ENST00000345851 PPP1CBP62140 327 aa18.15■□□□□ 0.5
TRIM3-201ENST00000345851 Q6ZWC4 215 aa18.15■□□□□ 0.5
TRIM3-201ENST00000345851 ALKBH3Q96Q83 286 aaPredicted RBP18.15■□□□□ 0.5
TRIM3-201ENST00000345851 CDKN1AP38936 164 aa18.15■□□□□ 0.5
TRIM3-201ENST00000345851 RNPS1Q15287 305 aaKnown RBP18.15■□□□□ 0.5
TRIM3-201ENST00000345851 RAET1LQ5VY80 246 aa18.15■□□□□ 0.5
TRIM3-201ENST00000345851 VN1R17PQ8TDU5 208 aa18.15■□□□□ 0.5
TRIM3-201ENST00000345851 TMEM106BQ9NUM4 274 aa18.15■□□□□ 0.5
TRIM3-201ENST00000345851 PPIAL4AQ9Y536 164 aa18.15■□□□□ 0.5
TRIM3-201ENST00000345851 hCG_38984A0A1B0GV85 526 aa18.14■□□□□ 0.49
TRIM3-201ENST00000345851 SIAH2O43255 324 aa18.14■□□□□ 0.49
TRIM3-201ENST00000345851 S100GP29377 79 aa18.14■□□□□ 0.49
TRIM3-201ENST00000345851 GNG10P50151 68 aa18.14■□□□□ 0.49
TRIM3-201ENST00000345851 DEFB126Q9BYW3 111 aa18.14■□□□□ 0.49
TRIM3-201ENST00000345851 GPR35Q9HC97 309 aa18.14■□□□□ 0.49
TRIM3-201ENST00000345851 LNP1A1A4G5 178 aa18.14■□□□□ 0.49
TRIM3-201ENST00000345851 TRAPPC6AO75865 159 aa18.14■□□□□ 0.49
TRIM3-201ENST00000345851 UMODP07911 640 aa18.14■□□□□ 0.49
TRIM3-201ENST00000345851 SP9P0CG40 484 aa18.14■□□□□ 0.49
TRIM3-201ENST00000345851 NPPCP23582 126 aa18.14■□□□□ 0.49
TRIM3-201ENST00000345851 ADMP35318 185 aa18.14■□□□□ 0.49
TRIM3-201ENST00000345851 ACSF3Q4G176 576 aaPredicted RBP18.14■□□□□ 0.49
TRIM3-201ENST00000345851 C20orf204Q6ZNR8 217 aa18.14■□□□□ 0.49
TRIM3-201ENST00000345851 OR10G9Q8NGN4 311 aa18.14■□□□□ 0.49
TRIM3-201ENST00000345851 OR10G7Q8NGN6 311 aa18.14■□□□□ 0.49
TRIM3-201ENST00000345851 WDYHV1Q96HA8 205 aa18.14■□□□□ 0.49
TRIM3-201ENST00000345851 PPP1R3CQ9UQK1 317 aa18.14■□□□□ 0.49
TRIM3-201ENST00000345851 IGKV1-5P01602 117 aa18.13■□□□□ 0.49
TRIM3-201ENST00000345851 RNF138Q8WVD3 245 aa18.13■□□□□ 0.49
TRIM3-201ENST00000345851 NEIL1Q96FI4 390 aaPredicted RBP18.13■□□□□ 0.49
TRIM3-201ENST00000345851 PXMP4Q9Y6I8 212 aa18.13■□□□□ 0.49
TRIM3-201ENST00000345851 CFAP47Q6ZTR5 3102 aa18.13■□□□□ 0.49
TRIM3-201ENST00000345851 KIR2DS1A0A191URI9 304 aa18.13■□□□□ 0.49
TRIM3-201ENST00000345851 TNFSF13O75888 250 aa18.13■□□□□ 0.49
TRIM3-201ENST00000345851 C1QTNF9P0C862 333 aa18.13■□□□□ 0.49
TRIM3-201ENST00000345851 KIR2DS4P43632 304 aa18.13■□□□□ 0.49
TRIM3-201ENST00000345851 KIR2DS1Q14954 304 aa18.13■□□□□ 0.49
TRIM3-201ENST00000345851 FGFBP3Q8TAT2 258 aa18.13■□□□□ 0.49
TRIM3-201ENST00000345851 UBALD1Q8TB05 177 aa18.13■□□□□ 0.49
TRIM3-201ENST00000345851 REPIN1Q9BWE0 567 aaKnown RBP18.13■□□□□ 0.49
TRIM3-201ENST00000345851 IGLV3-32A0A0A0MS00 114 aa18.13■□□□□ 0.49
TRIM3-201ENST00000345851 ZNF816-ZNF321PA0A0X1KG74 233 aa18.13■□□□□ 0.49
TRIM3-201ENST00000345851 CLDN1O95832 211 aa18.13■□□□□ 0.49
TRIM3-201ENST00000345851 CRYABP02511 175 aaKnown RBP18.13■□□□□ 0.49
TRIM3-201ENST00000345851 PCSK4Q6UW60 755 aa18.13■□□□□ 0.49
TRIM3-201ENST00000345851 ZIC4Q8N9L1 334 aa18.13■□□□□ 0.49
TRIM3-201ENST00000345851 IMMP2LQ96T52 175 aa18.13■□□□□ 0.49
TRIM3-201ENST00000345851 DERL1Q9BUN8 251 aa18.13■□□□□ 0.49
TRIM3-201ENST00000345851 RIMS4Q9H426 269 aaPredicted RBP18.13■□□□□ 0.49
TRIM3-201ENST00000345851 ATP23Q9Y6H3 246 aa18.13■□□□□ 0.49
TRIM3-201ENST00000345851 TRAV39A0A0B4J263 110 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms