RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 VENTXO95231 258 aa9.56□□□□□ -0.88
SNCA-202ENST00000345009 RNASE1P07998 156 aaKnown RBP9.56□□□□□ -0.88
SNCA-202ENST00000345009 FAM106CPP0CH98 169 aa9.56□□□□□ -0.88
SNCA-202ENST00000345009 ZNF134P52741 427 aa9.56□□□□□ -0.88
SNCA-202ENST00000345009 TAS2R46P59540 309 aa9.56□□□□□ -0.88
SNCA-202ENST00000345009 ACTBP60709 375 aa9.56□□□□□ -0.88
SNCA-202ENST00000345009 UBA52P62987 128 aaKnown RBP9.56□□□□□ -0.88
SNCA-202ENST00000345009 ACTG1P63261 375 aa9.56□□□□□ -0.88
SNCA-202ENST00000345009 GNMTQ14749 295 aa9.56□□□□□ -0.88
SNCA-202ENST00000345009 IGSF11Q5DX21 431 aa9.56□□□□□ -0.88
SNCA-202ENST00000345009 PYHIN1Q6K0P9 492 aa9.56□□□□□ -0.88
SNCA-202ENST00000345009 Q6ZPA2 131 aa9.56□□□□□ -0.88
SNCA-202ENST00000345009 TGIF2LXQ8IUE1 241 aa9.56□□□□□ -0.88
SNCA-202ENST00000345009 LAX1Q8IWV1 398 aa9.56□□□□□ -0.88
SNCA-202ENST00000345009 ZDHHC22Q8N966 263 aa9.56□□□□□ -0.88
SNCA-202ENST00000345009 ZNF439Q8NDP4 499 aa9.56□□□□□ -0.88
SNCA-202ENST00000345009 OR5AP2Q8NGF4 316 aa9.56□□□□□ -0.88
SNCA-202ENST00000345009 FCAMRQ8WWV6 532 aa9.56□□□□□ -0.88
SNCA-202ENST00000345009 AKR1E2Q96JD6 320 aa9.56□□□□□ -0.88
SNCA-202ENST00000345009 TOLLIPQ9H0E2 274 aa9.56□□□□□ -0.88
SNCA-202ENST00000345009 C11orf54Q9H0W9 315 aaPredicted RBP9.56□□□□□ -0.88
SNCA-202ENST00000345009 TNFRSF19Q9NS68 423 aa9.56□□□□□ -0.88
SNCA-202ENST00000345009 RDH8Q9NYR8 311 aa9.56□□□□□ -0.88
SNCA-202ENST00000345009 VPREB3Q9UKI3 123 aa9.56□□□□□ -0.88
SNCA-202ENST00000345009 IGKV1-6A0A0C4DH72 117 aa9.55□□□□□ -0.88
SNCA-202ENST00000345009 FABP12A6NFH5 140 aa9.55□□□□□ -0.88
SNCA-202ENST00000345009 LANCL1O43813 399 aa9.55□□□□□ -0.88
SNCA-202ENST00000345009 RBBP9O75884 186 aa9.55□□□□□ -0.88
SNCA-202ENST00000345009 SLC22A5O76082 557 aa9.55□□□□□ -0.88
SNCA-202ENST00000345009 GHRHP01286 108 aa9.55□□□□□ -0.88
SNCA-202ENST00000345009 RCVRNP35243 200 aa9.55□□□□□ -0.88
SNCA-202ENST00000345009 GPR12P47775 334 aa9.55□□□□□ -0.88
SNCA-202ENST00000345009 ZNF137PP52743 207 aa9.55□□□□□ -0.88
SNCA-202ENST00000345009 ZNF816Q0VGE8 651 aaPredicted RBP9.55□□□□□ -0.88
SNCA-202ENST00000345009 IL18Q14116 193 aa9.55□□□□□ -0.88
SNCA-202ENST00000345009 PLA1AQ53H76 456 aa9.55□□□□□ -0.88
SNCA-202ENST00000345009 SPANXN2Q5MJ10 180 aa9.55□□□□□ -0.88
SNCA-202ENST00000345009 UTF1Q5T230 341 aa9.55□□□□□ -0.88
SNCA-202ENST00000345009 FAM71F2Q6NXP2 309 aa9.55□□□□□ -0.88
SNCA-202ENST00000345009 MOB3BQ86TA1 216 aa9.55□□□□□ -0.88
SNCA-202ENST00000345009 GVQW1Q8N7I0 195 aa9.55□□□□□ -0.88
SNCA-202ENST00000345009 GPX8Q8TED1 209 aa9.55□□□□□ -0.88
SNCA-202ENST00000345009 DUX5Q96PT3 197 aa9.55□□□□□ -0.88
SNCA-202ENST00000345009 MIXL1Q9H2W2 232 aa9.55□□□□□ -0.88
SNCA-202ENST00000345009 ESM1Q9NQ30 184 aa9.55□□□□□ -0.88
SNCA-202ENST00000345009 OR1A1Q9P1Q5 309 aa9.55□□□□□ -0.88
SNCA-202ENST00000345009 SLC31A2O15432 143 aa9.54□□□□□ -0.88
SNCA-202ENST00000345009 OR8U9P0C7N5 309 aa9.54□□□□□ -0.88
SNCA-202ENST00000345009 OR5H8P0DN80 308 aa9.54□□□□□ -0.88
SNCA-202ENST00000345009 PTHLHP12272 177 aa9.54□□□□□ -0.88
SNCA-202ENST00000345009 TNFSF8P32971 234 aa9.54□□□□□ -0.88
SNCA-202ENST00000345009 SSBP1Q04837 148 aaKnown RBP9.54□□□□□ -0.88
SNCA-202ENST00000345009 HERPUD1Q15011 391 aa9.54□□□□□ -0.88
SNCA-202ENST00000345009 CDK10Q15131 360 aa9.54□□□□□ -0.88
SNCA-202ENST00000345009 LDLRAD2Q5SZI1 272 aa9.54□□□□□ -0.88
SNCA-202ENST00000345009 FAM53AQ6NSI3 398 aaPredicted RBP9.54□□□□□ -0.88
SNCA-202ENST00000345009 C5orf24Q7Z6I8 188 aa9.54□□□□□ -0.88
SNCA-202ENST00000345009 THNSL2Q86YJ6 484 aa9.54□□□□□ -0.88
SNCA-202ENST00000345009 DYNAPQ8N1N2 210 aa9.54□□□□□ -0.88
SNCA-202ENST00000345009 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.54□□□□□ -0.88
SNCA-202ENST00000345009 OR5H2Q8NGV7 314 aa9.54□□□□□ -0.88
SNCA-202ENST00000345009 OR8U1Q8NH10 309 aa9.54□□□□□ -0.88
SNCA-202ENST00000345009 RTN4IP1Q8WWV3 396 aaPredicted RBP9.54□□□□□ -0.88
SNCA-202ENST00000345009 ST6GALNAC6Q969X2 333 aa9.54□□□□□ -0.88
SNCA-202ENST00000345009 CHIAQ9BZP6 476 aa9.54□□□□□ -0.88
SNCA-202ENST00000345009 OR2W1Q9Y3N9 320 aa9.54□□□□□ -0.88
SNCA-202ENST00000345009 IGKV1D-8A0A087WSZ0 117 aa9.53□□□□□ -0.88
SNCA-202ENST00000345009 IGHV1-3A0A0C4DH29 117 aa9.53□□□□□ -0.88
SNCA-202ENST00000345009 MEIS3P1A6NDR6 274 aa9.53□□□□□ -0.88
SNCA-202ENST00000345009 GABARAPH6UMI1 98 aa9.53□□□□□ -0.88
SNCA-202ENST00000345009 TIMM23O14925 209 aa9.53□□□□□ -0.88
SNCA-202ENST00000345009 NAT1P18440 290 aa9.53□□□□□ -0.88
SNCA-202ENST00000345009 PTBP1P26599 531 aaKnown RBP eCLIP9.53□□□□□ -0.88
SNCA-202ENST00000345009 CD1BP29016 333 aa9.53□□□□□ -0.88
SNCA-202ENST00000345009 REG1BP48304 166 aa9.53□□□□□ -0.88
SNCA-202ENST00000345009 RAB13P51153 203 aa9.53□□□□□ -0.88
SNCA-202ENST00000345009 LUMP51884 338 aaPredicted RBP9.53□□□□□ -0.88
SNCA-202ENST00000345009 HES1Q14469 280 aa9.53□□□□□ -0.88
SNCA-202ENST00000345009 KRTAP21-3Q3LHN1 58 aa9.53□□□□□ -0.88
SNCA-202ENST00000345009 ACTBL2Q562R1 376 aa9.53□□□□□ -0.88
SNCA-202ENST00000345009 DHRS7BQ6IAN0 325 aaPredicted RBP9.53□□□□□ -0.88
SNCA-202ENST00000345009 FAM131AQ6UXB0 335 aa9.53□□□□□ -0.88
SNCA-202ENST00000345009 C16orf82Q7Z2V1 217 aa9.53□□□□□ -0.88
SNCA-202ENST00000345009 H1FOOQ8IZA3 346 aaPredicted RBP9.53□□□□□ -0.88
SNCA-202ENST00000345009 DRAM1Q8N682 238 aa9.53□□□□□ -0.88
SNCA-202ENST00000345009 BORCS5Q969J3 196 aa9.53□□□□□ -0.88
SNCA-202ENST00000345009 ABHD1Q96SE0 405 aa9.53□□□□□ -0.88
SNCA-202ENST00000345009 AGMATQ9BSE5 352 aa9.53□□□□□ -0.88
SNCA-202ENST00000345009 TAS2R8Q9NYW2 309 aa9.53□□□□□ -0.88
SNCA-202ENST00000345009 MTFP1Q9UDX5 166 aa9.53□□□□□ -0.88
SNCA-202ENST00000345009 RNF150Q9ULK6 438 aa9.53□□□□□ -0.88
SNCA-202ENST00000345009 GAB2Q9UQC2 676 aa9.53□□□□□ -0.88
SNCA-202ENST00000345009 TCF19Q9Y242 345 aa9.53□□□□□ -0.88
SNCA-202ENST00000345009 SAA2-SAA4A0A096LPE2 208 aa9.52□□□□□ -0.89
SNCA-202ENST00000345009 A0A1W2PPI3 338 aa9.52□□□□□ -0.89
SNCA-202ENST00000345009 A6NHS1 94 aa9.52□□□□□ -0.89
SNCA-202ENST00000345009 RNF212BA8MTL3 300 aa9.52□□□□□ -0.89
SNCA-202ENST00000345009 ZNF736B4DX44 427 aaPredicted RBP9.52□□□□□ -0.89
SNCA-202ENST00000345009 M0QZK8 103 aa9.52□□□□□ -0.89
SNCA-202ENST00000345009 CTDSPLO15194 276 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms