RNA–Protein interactions for RNA: ENST00000344921.10

SMARCB1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2 BASIC

Gene SMARCB1, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-202ENST00000344921 HLA-DQB1P01920 261 aa16.73■□□□□ 0.27
SMARCB1-202ENST00000344921 ARPC4P59998 168 aa16.73■□□□□ 0.27
SMARCB1-202ENST00000344921 HES1Q14469 280 aa16.73■□□□□ 0.27
SMARCB1-202ENST00000344921 LIAT1Q6ZQX7 453 aa16.73■□□□□ 0.27
SMARCB1-202ENST00000344921 LAX1Q8IWV1 398 aa16.73■□□□□ 0.27
SMARCB1-202ENST00000344921 ABHD14BQ96IU4 210 aa16.73■□□□□ 0.27
SMARCB1-202ENST00000344921 IFI27L2Q9H2X8 130 aa16.73■□□□□ 0.27
SMARCB1-202ENST00000344921 RNF150Q9ULK6 438 aa16.73■□□□□ 0.27
SMARCB1-202ENST00000344921 RBM7Q9Y580 266 aaKnown RBP16.73■□□□□ 0.27
SMARCB1-202ENST00000344921 RAB29O14966 203 aa16.72■□□□□ 0.27
SMARCB1-202ENST00000344921 TXNL1O43396 289 aa16.72■□□□□ 0.27
SMARCB1-202ENST00000344921 DIRAS3O95661 229 aa16.72■□□□□ 0.27
SMARCB1-202ENST00000344921 CTXN2P0C2S0 81 aa16.72■□□□□ 0.27
SMARCB1-202ENST00000344921 FAM106CPP0CH98 169 aa16.72■□□□□ 0.27
SMARCB1-202ENST00000344921 HKR1P10072 659 aa16.72■□□□□ 0.27
SMARCB1-202ENST00000344921 ZNF137PP52743 207 aa16.72■□□□□ 0.27
SMARCB1-202ENST00000344921 CNIH2Q6PI25 160 aa16.72■□□□□ 0.27
SMARCB1-202ENST00000344921 HOGA1Q86XE5 327 aa16.72■□□□□ 0.27
SMARCB1-202ENST00000344921 DRAXINQ8NBI3 349 aaPredicted RBP16.72■□□□□ 0.27
SMARCB1-202ENST00000344921 SLIRPQ9GZT3 109 aaKnown RBP16.72■□□□□ 0.27
SMARCB1-202ENST00000344921 SAA2-SAA4A0A096LPE2 208 aa16.71■□□□□ 0.27
SMARCB1-202ENST00000344921 IGHV3-72A0A0B4J1Y9 119 aa16.71■□□□□ 0.27
SMARCB1-202ENST00000344921 A6NDX4 124 aa16.71■□□□□ 0.27
SMARCB1-202ENST00000344921 ITGB1BP1O14713 200 aa16.71■□□□□ 0.27
SMARCB1-202ENST00000344921 SAA2P0DJI9 122 aaPredicted RBP16.71■□□□□ 0.27
SMARCB1-202ENST00000344921 OR3A3P47888 321 aa16.71■□□□□ 0.27
SMARCB1-202ENST00000344921 CCBE1Q6UXH8 406 aaPredicted RBP16.71■□□□□ 0.27
SMARCB1-202ENST00000344921 ODF3L1Q8IXM7 274 aa16.71■□□□□ 0.27
SMARCB1-202ENST00000344921 MCFD2Q8NI22 146 aa16.71■□□□□ 0.27
SMARCB1-202ENST00000344921 S1PR3Q99500 378 aa16.71■□□□□ 0.27
SMARCB1-202ENST00000344921 MIXL1Q9H2W2 232 aa16.71■□□□□ 0.27
SMARCB1-202ENST00000344921 ZNF221Q9UK13 617 aa16.71■□□□□ 0.27
SMARCB1-202ENST00000344921 SNRNP70P08621 437 aaKnown RBP16.7■□□□□ 0.26
SMARCB1-202ENST00000344921 GHITMQ9H3K2 345 aa16.7■□□□□ 0.26
SMARCB1-202ENST00000344921 C1RLQ9NZP8 487 aa16.7■□□□□ 0.26
SMARCB1-202ENST00000344921 LANCL1O43813 399 aa16.7■□□□□ 0.26
SMARCB1-202ENST00000344921 CHST1O43916 411 aa16.7■□□□□ 0.26
SMARCB1-202ENST00000344921 OR8U9P0C7N5 309 aa16.7■□□□□ 0.26
SMARCB1-202ENST00000344921 OR8U1Q8NH10 309 aa16.7■□□□□ 0.26
SMARCB1-202ENST00000344921 CFHR4Q92496 578 aa16.7■□□□□ 0.26
SMARCB1-202ENST00000344921 DIRAS2Q96HU8 199 aa16.7■□□□□ 0.26
SMARCB1-202ENST00000344921 AGMATQ9BSE5 352 aa16.7■□□□□ 0.26
SMARCB1-202ENST00000344921 TOLLIPQ9H0E2 274 aa16.7■□□□□ 0.26
SMARCB1-202ENST00000344921 COL6A5A8TX70 2615 aa16.69■□□□□ 0.26
SMARCB1-202ENST00000344921 TMEM89A2RUT3 159 aa16.69■□□□□ 0.26
SMARCB1-202ENST00000344921 IGKV1D-33P01593 117 aa16.69■□□□□ 0.26
SMARCB1-202ENST00000344921 IGKV1-33P01594 117 aa16.69■□□□□ 0.26
SMARCB1-202ENST00000344921 GPR12P47775 334 aa16.69■□□□□ 0.26
SMARCB1-202ENST00000344921 FOXL1Q12952 345 aa16.69■□□□□ 0.26
SMARCB1-202ENST00000344921 HNF4GQ14541 408 aa16.69■□□□□ 0.26
SMARCB1-202ENST00000344921 RPL39P5Q59GN2 51 aa16.69■□□□□ 0.26
SMARCB1-202ENST00000344921 AKR1E2Q96JD6 320 aa16.69■□□□□ 0.26
SMARCB1-202ENST00000344921 J3QRK9 145 aa16.68■□□□□ 0.26
SMARCB1-202ENST00000344921 NFYAP23511 347 aaPredicted RBP16.68■□□□□ 0.26
SMARCB1-202ENST00000344921 RAG2P55895 527 aa16.68■□□□□ 0.26
SMARCB1-202ENST00000344921 RELBQ01201 579 aa16.68■□□□□ 0.26
SMARCB1-202ENST00000344921 RNASE12Q5GAN4 147 aaKnown RBP16.68■□□□□ 0.26
SMARCB1-202ENST00000344921 ZNF833PQ6ZTB9 187 aa16.68■□□□□ 0.26
SMARCB1-202ENST00000344921 THNSL2Q86YJ6 484 aa16.68■□□□□ 0.26
SMARCB1-202ENST00000344921 H1FOOQ8IZA3 346 aaPredicted RBP16.68■□□□□ 0.26
SMARCB1-202ENST00000344921 SLC25A33Q9BSK2 321 aa16.68■□□□□ 0.26
SMARCB1-202ENST00000344921 NPFFR1Q9GZQ6 430 aa16.68■□□□□ 0.26
SMARCB1-202ENST00000344921 OR2D2Q9H210 308 aa16.68■□□□□ 0.26
SMARCB1-202ENST00000344921 NECAP2Q9NVZ3 263 aa16.68■□□□□ 0.26
SMARCB1-202ENST00000344921 FAM90A9PA6NNJ1 464 aa16.67■□□□□ 0.26
SMARCB1-202ENST00000344921 TMEM11P17152 192 aa16.67■□□□□ 0.26
SMARCB1-202ENST00000344921 OR4F5Q8NH21 305 aa16.67■□□□□ 0.26
SMARCB1-202ENST00000344921 GPX8Q8TED1 209 aa16.67■□□□□ 0.26
SMARCB1-202ENST00000344921 C15orf40Q8WUR7 153 aa16.67■□□□□ 0.26
SMARCB1-202ENST00000344921 SNAPC3Q92966 411 aa16.67■□□□□ 0.26
SMARCB1-202ENST00000344921 MRPL20Q9BYC9 149 aaKnown RBP16.67■□□□□ 0.26
SMARCB1-202ENST00000344921 SCPEP1Q9HB40 452 aa16.67■□□□□ 0.26
SMARCB1-202ENST00000344921 CD1BP29016 333 aa16.67■□□□□ 0.26
SMARCB1-202ENST00000344921 HABP2Q14520 560 aaPredicted RBP16.67■□□□□ 0.26
SMARCB1-202ENST00000344921 FAM71F2Q6NXP2 309 aa16.67■□□□□ 0.26
SMARCB1-202ENST00000344921 OR5AP2Q8NGF4 316 aa16.67■□□□□ 0.26
SMARCB1-202ENST00000344921 ZNF736B4DX44 427 aaPredicted RBP16.66■□□□□ 0.26
SMARCB1-202ENST00000344921 SULT1C2O00338 296 aa16.66■□□□□ 0.26
SMARCB1-202ENST00000344921 IL18Q14116 193 aa16.66■□□□□ 0.26
SMARCB1-202ENST00000344921 FBLN7Q53RD9 439 aa16.66■□□□□ 0.26
SMARCB1-202ENST00000344921 C12orf54Q6X4T0 127 aa16.66■□□□□ 0.26
SMARCB1-202ENST00000344921 Q6ZSV7 163 aa16.66■□□□□ 0.26
SMARCB1-202ENST00000344921 C16orf82Q7Z2V1 217 aa16.66■□□□□ 0.26
SMARCB1-202ENST00000344921 OR4C13Q8NGP0 309 aa16.66■□□□□ 0.26
SMARCB1-202ENST00000344921 OR2T10Q8NGZ9 312 aa16.66■□□□□ 0.26
SMARCB1-202ENST00000344921 RBM14Q96PK6 669 aaKnown RBP16.66■□□□□ 0.26
SMARCB1-202ENST00000344921 NXF2Q9GZY0 626 aaKnown RBP16.66■□□□□ 0.26
SMARCB1-202ENST00000344921 OR2W1Q9Y3N9 320 aa16.66■□□□□ 0.26
SMARCB1-202ENST00000344921 OR2F2O95006 317 aa16.65■□□□□ 0.26
SMARCB1-202ENST00000344921 NDUFA7O95182 113 aa16.65■□□□□ 0.26
SMARCB1-202ENST00000344921 OR5H8P0DN80 308 aa16.65■□□□□ 0.26
SMARCB1-202ENST00000344921 MDKP21741 143 aaPredicted RBP16.65■□□□□ 0.26
SMARCB1-202ENST00000344921 ABHD1Q96SE0 405 aa16.65■□□□□ 0.26
SMARCB1-202ENST00000344921 NABP2Q9BQ15 211 aa16.65■□□□□ 0.26
SMARCB1-202ENST00000344921 ZNF251Q9BRH9 671 aa16.65■□□□□ 0.26
SMARCB1-202ENST00000344921 MMP27Q9H306 513 aa16.65■□□□□ 0.26
SMARCB1-202ENST00000344921 BEX1Q9HBH7 125 aa16.65■□□□□ 0.26
SMARCB1-202ENST00000344921 TPPPO94811 219 aa16.65■□□□□ 0.26
SMARCB1-202ENST00000344921 S100A5P33763 92 aa16.65■□□□□ 0.26
SMARCB1-202ENST00000344921 LUMP51884 338 aaPredicted RBP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms