RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 QSER1Q2KHR3 1735 aa15.63■□□□□ 0.09
SMC4-201ENST00000344722 MYF5P13349 255 aa15.63■□□□□ 0.09
SMC4-201ENST00000344722 CLDND2Q8NHS1 167 aa15.63■□□□□ 0.09
SMC4-201ENST00000344722 RTBDNQ9BSG5 229 aaPredicted RBP15.63■□□□□ 0.09
SMC4-201ENST00000344722 CLDN18P56856 261 aa15.63■□□□□ 0.09
SMC4-201ENST00000344722 TNFRSF9Q07011 255 aa15.63■□□□□ 0.09
SMC4-201ENST00000344722 LOXL2Q9Y4K0 774 aa15.63■□□□□ 0.09
SMC4-201ENST00000344722 ACP1P24666 158 aa15.63■□□□□ 0.09
SMC4-201ENST00000344722 UNC119Q13432 240 aa15.63■□□□□ 0.09
SMC4-201ENST00000344722 TRAV39A0A0B4J263 110 aa15.63■□□□□ 0.09
SMC4-201ENST00000344722 HIST1H2BKO60814 126 aa15.63■□□□□ 0.09
SMC4-201ENST00000344722 HIST1H2BJP06899 126 aa15.63■□□□□ 0.09
SMC4-201ENST00000344722 RPL7P18124 248 aaKnown RBP15.63■□□□□ 0.09
SMC4-201ENST00000344722 HIST1H2BOP23527 126 aa15.63■□□□□ 0.09
SMC4-201ENST00000344722 HIST1H2BBP33778 126 aa15.63■□□□□ 0.09
SMC4-201ENST00000344722 HIST1H2BDP58876 126 aa15.63■□□□□ 0.09
SMC4-201ENST00000344722 HIST1H2BCP62807 126 aa15.63■□□□□ 0.09
SMC4-201ENST00000344722 HIST2H2BEQ16778 126 aa15.63■□□□□ 0.09
SMC4-201ENST00000344722 HIST2H2BFQ5QNW6 126 aaPredicted RBP15.63■□□□□ 0.09
SMC4-201ENST00000344722 SLC35E4Q6ICL7 350 aa15.63■□□□□ 0.09
SMC4-201ENST00000344722 C1QL4Q86Z23 238 aa15.63■□□□□ 0.09
SMC4-201ENST00000344722 HIST1H2BHQ93079 126 aa15.63■□□□□ 0.09
SMC4-201ENST00000344722 HIST1H2BNQ99877 126 aa15.63■□□□□ 0.09
SMC4-201ENST00000344722 HIST1H2BMQ99879 126 aa15.63■□□□□ 0.09
SMC4-201ENST00000344722 HLA-DRB1P01911 266 aa15.62■□□□□ 0.09
SMC4-201ENST00000344722 SRSF9Q13242 221 aaKnown RBP eCLIP15.62■□□□□ 0.09
SMC4-201ENST00000344722 JOSD1Q15040 202 aaPredicted RBP15.62■□□□□ 0.09
SMC4-201ENST00000344722 HEPN1Q6WQI6 88 aa15.62■□□□□ 0.09
SMC4-201ENST00000344722 OR1L1Q8NH94 360 aa15.62■□□□□ 0.09
SMC4-201ENST00000344722 SLC25A28Q96A46 364 aa15.62■□□□□ 0.09
SMC4-201ENST00000344722 ZNFX1Q9P2E3 1918 aaKnown RBP15.62■□□□□ 0.09
SMC4-201ENST00000344722 TRAV38-1A0A0B4J264 116 aa15.62■□□□□ 0.09
SMC4-201ENST00000344722 K7ESF4 209 aa15.62■□□□□ 0.09
SMC4-201ENST00000344722 CEACAM21Q3KPI0 293 aa15.62■□□□□ 0.09
SMC4-201ENST00000344722 MYOZ3Q8TDC0 251 aa15.62■□□□□ 0.09
SMC4-201ENST00000344722 PLA2G2FQ9BZM2 168 aa15.62■□□□□ 0.09
SMC4-201ENST00000344722 LHFPL6Q9Y693 200 aa15.62■□□□□ 0.09
SMC4-201ENST00000344722 TRGV5A0A0B4J1U4 118 aa15.62■□□□□ 0.09
SMC4-201ENST00000344722 TMEM210A6NLX4 147 aa15.62■□□□□ 0.09
SMC4-201ENST00000344722 RELBQ01201 579 aa15.62■□□□□ 0.09
SMC4-201ENST00000344722 RPRMQ9NS64 109 aa15.62■□□□□ 0.09
SMC4-201ENST00000344722 TSPAN2O60636 221 aa15.62■□□□□ 0.09
SMC4-201ENST00000344722 WDR74Q6RFH5 385 aaPredicted RBP15.62■□□□□ 0.09
SMC4-201ENST00000344722 PQLC2Q6ZP29 291 aa15.62■□□□□ 0.09
SMC4-201ENST00000344722 SFTPA1Q8IWL2 248 aa15.62■□□□□ 0.09
SMC4-201ENST00000344722 ZNF645Q8N7E2 425 aa15.62■□□□□ 0.09
SMC4-201ENST00000344722 SPSB4Q96A44 273 aa15.62■□□□□ 0.09
SMC4-201ENST00000344722 RCC1LQ96I51 464 aaKnown RBP15.62■□□□□ 0.09
SMC4-201ENST00000344722 SLX1AQ9BQ83 275 aa15.62■□□□□ 0.09
SMC4-201ENST00000344722 SLC25A33Q9BSK2 321 aa15.62■□□□□ 0.09
SMC4-201ENST00000344722 CNTRLQ7Z7A1 2325 aa15.61■□□□□ 0.09
SMC4-201ENST00000344722 STARD6P59095 220 aa15.61■□□□□ 0.09
SMC4-201ENST00000344722 GBGT1Q8N5D6 347 aa15.61■□□□□ 0.09
SMC4-201ENST00000344722 CD5P06127 495 aa15.61■□□□□ 0.09
SMC4-201ENST00000344722 FGFRL1Q8N441 504 aa15.61■□□□□ 0.09
SMC4-201ENST00000344722 UCN2Q96RP3 112 aa15.61■□□□□ 0.09
SMC4-201ENST00000344722 LOC390937A0A1W2PQ73 354 aa15.61■□□□□ 0.09
SMC4-201ENST00000344722 J3QRE1 110 aa15.61■□□□□ 0.09
SMC4-201ENST00000344722 SNCGO76070 127 aa15.61■□□□□ 0.09
SMC4-201ENST00000344722 CADM4Q8NFZ8 388 aa15.61■□□□□ 0.09
SMC4-201ENST00000344722 IGHV3-13P01766 116 aa15.61■□□□□ 0.09
SMC4-201ENST00000344722 IGHV3-7P01780 117 aa15.61■□□□□ 0.09
SMC4-201ENST00000344722 TMEM170AQ8WVE7 144 aa15.61■□□□□ 0.09
SMC4-201ENST00000344722 CTHRC1Q96CG8 243 aa15.61■□□□□ 0.09
SMC4-201ENST00000344722 A0A1B0GV72 72 aa15.6■□□□□ 0.09
SMC4-201ENST00000344722 OR4C46A6NHA9 309 aa15.6■□□□□ 0.09
SMC4-201ENST00000344722 MS4A18H0YCH9 400 aa15.6■□□□□ 0.09
SMC4-201ENST00000344722 WNT5AP41221 380 aa15.6■□□□□ 0.09
SMC4-201ENST00000344722 MS4A18Q3C1V0 323 aa15.6■□□□□ 0.09
SMC4-201ENST00000344722 IL9P15248 144 aa15.6■□□□□ 0.09
SMC4-201ENST00000344722 SPSB2Q99619 263 aa15.6■□□□□ 0.09
SMC4-201ENST00000344722 H3BVH4 76 aa15.6■□□□□ 0.09
SMC4-201ENST00000344722 ARL14EPLP0DKL9 152 aa15.6■□□□□ 0.09
SMC4-201ENST00000344722 ZNF385AQ96PM9 386 aaKnown RBP15.6■□□□□ 0.09
SMC4-201ENST00000344722 ALKBH7Q9BT30 221 aaPredicted RBP15.6■□□□□ 0.09
SMC4-201ENST00000344722 OR51B2Q9Y5P1 312 aa15.6■□□□□ 0.09
SMC4-201ENST00000344722 J3QR06 171 aa15.6■□□□□ 0.09
SMC4-201ENST00000344722 ZNF818PQ6ZRF7 136 aa15.6■□□□□ 0.09
SMC4-201ENST00000344722 POU2F2P09086 479 aa15.59■□□□□ 0.09
SMC4-201ENST00000344722 CBLN1P23435 193 aa15.59■□□□□ 0.09
SMC4-201ENST00000344722 TRA2AQ13595 282 aaKnown RBP eCLIP15.59■□□□□ 0.095e-7■■□□□ 14
SMC4-201ENST00000344722 SMIM10L1P0DMW3 83 aa15.59■□□□□ 0.09
SMC4-201ENST00000344722 MPZP25189 248 aa15.59■□□□□ 0.09
SMC4-201ENST00000344722 ATOH7Q8N100 152 aa15.59■□□□□ 0.09
SMC4-201ENST00000344722 SMIM10Q96HG1 83 aa15.59■□□□□ 0.09
SMC4-201ENST00000344722 TRAV9-1A0A075B6T8 112 aa15.59■□□□□ 0.09
SMC4-201ENST00000344722 FZR1Q9UM11 496 aa15.59■□□□□ 0.09
SMC4-201ENST00000344722 CLDN16Q9Y5I7 305 aa15.59■□□□□ 0.09
SMC4-201ENST00000344722 CEBPDP49716 269 aaPredicted RBP15.59■□□□□ 0.09
SMC4-201ENST00000344722 MIC13Q5XKP0 118 aa15.59■□□□□ 0.09
SMC4-201ENST00000344722 NIT1Q86X76 327 aa15.59■□□□□ 0.09
SMC4-201ENST00000344722 FAM216AQ8WUB2 273 aa15.59■□□□□ 0.09
SMC4-201ENST00000344722 TNFSF10P50591 281 aa15.58■□□□□ 0.09
SMC4-201ENST00000344722 TAF1LQ8IZX4 1826 aa15.58■□□□□ 0.09
SMC4-201ENST00000344722 TMEM238LA0A1B0GVL6 79 aa15.58■□□□□ 0.09
SMC4-201ENST00000344722 A6NJY4 79 aa15.58■□□□□ 0.09
SMC4-201ENST00000344722 MAS1LP35410 378 aa15.58■□□□□ 0.09
SMC4-201ENST00000344722 KIAA1644Q3SXP7 199 aa15.58■□□□□ 0.09
SMC4-201ENST00000344722 ABHD3Q8WU67 409 aa15.58■□□□□ 0.09
SMC4-201ENST00000344722 MRPL37Q9BZE1 423 aaKnown RBP15.58■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms