RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 GTF3C1Q12789 2109 aa14.01□□□□□ -0.17
SMARCA4-201ENST00000344626 TCTE3Q8IZS6 198 aa14.01□□□□□ -0.17
SMARCA4-201ENST00000344626 OR51B2Q9Y5P1 312 aa14.01□□□□□ -0.17
SMARCA4-201ENST00000344626 FAM24AA6NFZ4 105 aa14.01□□□□□ -0.17
SMARCA4-201ENST00000344626 J3QR06 171 aa14.01□□□□□ -0.17
SMARCA4-201ENST00000344626 PF4V1P10720 104 aa14.01□□□□□ -0.17
SMARCA4-201ENST00000344626 G6PCP35575 357 aa14.01□□□□□ -0.17
SMARCA4-201ENST00000344626 ZNF645Q8N7E2 425 aa14.01□□□□□ -0.17
SMARCA4-201ENST00000344626 LILRB4Q8NHJ6 448 aa14.01□□□□□ -0.17
SMARCA4-201ENST00000344626 SSTP61278 116 aa14.01□□□□□ -0.17
SMARCA4-201ENST00000344626 AARDQ4LEZ3 155 aa14.01□□□□□ -0.17
SMARCA4-201ENST00000344626 BSCL2Q96G97 398 aaPredicted RBP14.01□□□□□ -0.17
SMARCA4-201ENST00000344626 FAM201AQ5SY85 155 aa14□□□□□ -0.17
SMARCA4-201ENST00000344626 MRGPRFQ96AM1 343 aa14□□□□□ -0.17
SMARCA4-201ENST00000344626 TMEM186Q96B77 213 aa14□□□□□ -0.17
SMARCA4-201ENST00000344626 AP1S3Q96PC3 154 aa14□□□□□ -0.17
SMARCA4-201ENST00000344626 hCG_38984A0A1B0GV85 526 aa14□□□□□ -0.17
SMARCA4-201ENST00000344626 C17orf100A8MU93 164 aa14□□□□□ -0.17
SMARCA4-201ENST00000344626 INHBBP09529 407 aa14□□□□□ -0.17
SMARCA4-201ENST00000344626 S100A4P26447 101 aaKnown RBP14□□□□□ -0.17
SMARCA4-201ENST00000344626 P2RY1P47900 373 aa14□□□□□ -0.17
SMARCA4-201ENST00000344626 UBE2V2Q15819 145 aa14□□□□□ -0.17
SMARCA4-201ENST00000344626 ST8SIA2Q92186 375 aa14□□□□□ -0.17
SMARCA4-201ENST00000344626 SSBP3Q9BWW4 388 aaPredicted RBP14□□□□□ -0.17
SMARCA4-201ENST00000344626 ORM2P19652 201 aa14□□□□□ -0.17
SMARCA4-201ENST00000344626 RPL27AP46776 148 aaKnown RBP14□□□□□ -0.17
SMARCA4-201ENST00000344626 VAX1Q5SQQ9 334 aa14□□□□□ -0.17
SMARCA4-201ENST00000344626 RPL7L1Q6DKI1 246 aaKnown RBP14□□□□□ -0.17
SMARCA4-201ENST00000344626 HIST2H3AQ71DI3 136 aa14□□□□□ -0.17
SMARCA4-201ENST00000344626 MIXL1Q9H2W2 232 aa14□□□□□ -0.17
SMARCA4-201ENST00000344626 PARP11Q9NR21 331 aa14□□□□□ -0.17
SMARCA4-201ENST00000344626 MPC2O95563 127 aa14□□□□□ -0.17
SMARCA4-201ENST00000344626 MMD2Q8IY49 270 aa14□□□□□ -0.17
SMARCA4-201ENST00000344626 TMEM208Q9BTX3 173 aa14□□□□□ -0.17
SMARCA4-201ENST00000344626 V9GYS6 101 aa14□□□□□ -0.17
SMARCA4-201ENST00000344626 DOCK10Q96BY6 2186 aa14□□□□□ -0.17
SMARCA4-201ENST00000344626 MARVELD1Q9BSK0 173 aa14□□□□□ -0.17
SMARCA4-201ENST00000344626 ABCA2Q9BZC7 2435 aa13.99□□□□□ -0.17
SMARCA4-201ENST00000344626 IGKV3D-15A0A087WSY6 115 aa13.99□□□□□ -0.17
SMARCA4-201ENST00000344626 PCP4L1A6NKN8 68 aa13.99□□□□□ -0.17
SMARCA4-201ENST00000344626 PROB1E7EW31 1015 aa13.99□□□□□ -0.17
SMARCA4-201ENST00000344626 LMX1BO60663 402 aa13.99□□□□□ -0.17
SMARCA4-201ENST00000344626 PSG2P11465 335 aa13.99□□□□□ -0.17
SMARCA4-201ENST00000344626 POLR2GP62487 172 aaKnown RBP eCLIP13.99□□□□□ -0.17
SMARCA4-201ENST00000344626 CALHM1Q8IU99 346 aa13.99□□□□□ -0.17
SMARCA4-201ENST00000344626 RBM38Q9H0Z9 239 aaKnown RBP13.99□□□□□ -0.17
SMARCA4-201ENST00000344626 IQCF6A8MYZ5 107 aa13.99□□□□□ -0.17
SMARCA4-201ENST00000344626 ICMTO60725 284 aa13.99□□□□□ -0.17
SMARCA4-201ENST00000344626 SLC6A1P30531 599 aa13.99□□□□□ -0.17
SMARCA4-201ENST00000344626 FAM90A1Q86YD7 464 aa13.99□□□□□ -0.17
SMARCA4-201ENST00000344626 OR1B1Q8NGR6 318 aa13.99□□□□□ -0.17
SMARCA4-201ENST00000344626 MITD1Q8WV92 249 aa13.99□□□□□ -0.17
SMARCA4-201ENST00000344626 PLSCR4Q9NRQ2 329 aa13.99□□□□□ -0.17
SMARCA4-201ENST00000344626 METTL1Q9UBP6 276 aaKnown RBP13.99□□□□□ -0.17
SMARCA4-201ENST00000344626 BOLA1Q9Y3E2 137 aa13.99□□□□□ -0.17
SMARCA4-201ENST00000344626 DOCK4Q8N1I0 1966 aa13.99□□□□□ -0.17
SMARCA4-201ENST00000344626 SMIM17P0DL12 118 aa13.99□□□□□ -0.17
SMARCA4-201ENST00000344626 UNQ9370/PRO34162Q6UXP9 181 aa13.99□□□□□ -0.17
SMARCA4-201ENST00000344626 AQP3Q92482 292 aa13.99□□□□□ -0.17
SMARCA4-201ENST00000344626 ANKHD1Q8IWZ3 2542 aaKnown RBP13.99□□□□□ -0.17
SMARCA4-201ENST00000344626 ZNF716A6NP11 495 aa13.99□□□□□ -0.17
SMARCA4-201ENST00000344626 ADAM10O14672 748 aa13.99□□□□□ -0.17
SMARCA4-201ENST00000344626 CHEK1O14757 476 aa13.99□□□□□ -0.17
SMARCA4-201ENST00000344626 BTNL8Q6UX41 500 aa13.99□□□□□ -0.17
SMARCA4-201ENST00000344626 DCTN5Q9BTE1 182 aa13.99□□□□□ -0.17
SMARCA4-201ENST00000344626 V9GYH0 126 aa13.99□□□□□ -0.17
SMARCA4-201ENST00000344626 H7BYZ3 331 aa13.98□□□□□ -0.17
SMARCA4-201ENST00000344626 SPP1P10451 314 aa13.98□□□□□ -0.17
SMARCA4-201ENST00000344626 OR5M8Q8NGP6 311 aa13.98□□□□□ -0.17
SMARCA4-201ENST00000344626 OR5B3Q8NH48 314 aa13.98□□□□□ -0.17
SMARCA4-201ENST00000344626 RPUSD4Q96CM3 377 aaKnown RBP13.98□□□□□ -0.17
SMARCA4-201ENST00000344626 SPNP16150 400 aa13.98□□□□□ -0.17
SMARCA4-201ENST00000344626 GZMKP49863 264 aa13.98□□□□□ -0.17
SMARCA4-201ENST00000344626 RNFT1Q5M7Z0 435 aa13.98□□□□□ -0.17
SMARCA4-201ENST00000344626 SLC35E4Q6ICL7 350 aa13.98□□□□□ -0.17
SMARCA4-201ENST00000344626 MRPL13Q9BYD1 178 aaKnown RBP13.98□□□□□ -0.17
SMARCA4-201ENST00000344626 SLC25A5P05141 298 aaKnown RBP13.98□□□□□ -0.17
SMARCA4-201ENST00000344626 TDGF1P13385 188 aa13.98□□□□□ -0.17
SMARCA4-201ENST00000344626 NPY1RP25929 384 aa13.98□□□□□ -0.17
SMARCA4-201ENST00000344626 TMEM41BQ5BJD5 291 aa13.98□□□□□ -0.17
SMARCA4-201ENST00000344626 PCNPQ8WW12 178 aaKnown RBP13.98□□□□□ -0.17
SMARCA4-201ENST00000344626 STARD4Q96DR4 205 aa13.98□□□□□ -0.17
SMARCA4-201ENST00000344626 LURAP1Q96LR2 239 aa13.98□□□□□ -0.17
SMARCA4-201ENST00000344626 Q96M66 194 aa13.98□□□□□ -0.17
SMARCA4-201ENST00000344626 HIVEP2P31629 2446 aa13.98□□□□□ -0.17
SMARCA4-201ENST00000344626 PJVKQ0ZLH3 352 aa13.98□□□□□ -0.17
SMARCA4-201ENST00000344626 SLC25A22Q9H936 323 aa13.98□□□□□ -0.17
SMARCA4-201ENST00000344626 METRNQ9UJH8 293 aa13.98□□□□□ -0.17
SMARCA4-201ENST00000344626 CHST1O43916 411 aa13.97□□□□□ -0.17
SMARCA4-201ENST00000344626 S100A8P05109 93 aa13.97□□□□□ -0.17
SMARCA4-201ENST00000344626 M6PRP20645 277 aa13.97□□□□□ -0.17
SMARCA4-201ENST00000344626 KIR2DL2P43627 348 aaPredicted RBP13.97□□□□□ -0.17
SMARCA4-201ENST00000344626 KLF9Q13886 244 aaPredicted RBP13.97□□□□□ -0.17
SMARCA4-201ENST00000344626 ACP7Q6ZNF0 438 aa13.97□□□□□ -0.17
SMARCA4-201ENST00000344626 OR1L1Q8NH94 360 aa13.97□□□□□ -0.17
SMARCA4-201ENST00000344626 TLN1Q9Y490 2541 aaKnown RBP13.97□□□□□ -0.17
SMARCA4-201ENST00000344626 IGKV1D-43A0A0B4J1Z2 117 aa13.97□□□□□ -0.17
SMARCA4-201ENST00000344626 NPIPB7O75200 414 aa13.97□□□□□ -0.17
SMARCA4-201ENST00000344626 DSCR9P59020 149 aa13.97□□□□□ -0.17
SMARCA4-201ENST00000344626 PNKDQ8N490 385 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms