RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 LSM5Q9Y4Y9 91 aaKnown RBP11.22□□□□□ -0.61
CDC42-202ENST00000344548 ZNF462Q96JM2 2506 aa11.22□□□□□ -0.61
CDC42-202ENST00000344548 TRAV38-1A0A0B4J264 116 aa11.21□□□□□ -0.61
CDC42-202ENST00000344548 LINC00473A8K010 186 aa11.21□□□□□ -0.61
CDC42-202ENST00000344548 F2RL2O00254 374 aa11.21□□□□□ -0.61
CDC42-202ENST00000344548 NDUFB7P17568 137 aa11.21□□□□□ -0.61
CDC42-202ENST00000344548 CLEC9AQ6UXN8 241 aa11.21□□□□□ -0.61
CDC42-202ENST00000344548 OR4D5Q8NGN0 318 aa11.21□□□□□ -0.61
CDC42-202ENST00000344548 NINJ1Q92982 152 aa11.21□□□□□ -0.61
CDC42-202ENST00000344548 RBPMSQ93062 196 aaKnown RBP11.21□□□□□ -0.61
CDC42-202ENST00000344548 AKR1E2Q96JD6 320 aa11.21□□□□□ -0.61
CDC42-202ENST00000344548 ZNRD1Q9P1U0 126 aa11.21□□□□□ -0.61
CDC42-202ENST00000344548 GNG12Q9UBI6 72 aa11.21□□□□□ -0.61
CDC42-202ENST00000344548 TMED3Q9Y3Q3 217 aa11.21□□□□□ -0.61
CDC42-202ENST00000344548 UTP20O75691 2785 aaKnown RBP11.21□□□□□ -0.62
CDC42-202ENST00000344548 SPDEFO95238 335 aa11.21□□□□□ -0.62
CDC42-202ENST00000344548 CXorf66Q5JRM2 361 aaPredicted RBP11.21□□□□□ -0.62
CDC42-202ENST00000344548 ALKAL2Q6UX46 152 aa11.21□□□□□ -0.62
CDC42-202ENST00000344548 FAM234AQ9H0X4 552 aa11.21□□□□□ -0.62
CDC42-202ENST00000344548 OR6C3Q9NZP0 311 aa11.21□□□□□ -0.62
CDC42-202ENST00000344548 SLC25A10Q9UBX3 287 aaPredicted RBP11.21□□□□□ -0.62
CDC42-202ENST00000344548 KBTBD11-OT1A0A1B0GTJ5 212 aa11.2□□□□□ -0.62
CDC42-202ENST00000344548 K7EPK0 472 aa11.2□□□□□ -0.62
CDC42-202ENST00000344548 DEDDO75618 318 aa11.2□□□□□ -0.62
CDC42-202ENST00000344548 IGKV1-5P01602 117 aa11.2□□□□□ -0.62
CDC42-202ENST00000344548 CCL3L1P16619 93 aa11.2□□□□□ -0.62
CDC42-202ENST00000344548 ZNF345Q14585 488 aa11.2□□□□□ -0.62
CDC42-202ENST00000344548 C11orf71Q6IPW1 123 aa11.2□□□□□ -0.62
CDC42-202ENST00000344548 FAM71E2Q8N5Q1 922 aa11.2□□□□□ -0.62
CDC42-202ENST00000344548 BSCL2Q96G97 398 aaPredicted RBP11.2□□□□□ -0.62
CDC42-202ENST00000344548 CLN8Q9UBY8 286 aa11.2□□□□□ -0.62
CDC42-202ENST00000344548 C17orf98A8MV24 154 aa11.2□□□□□ -0.62
CDC42-202ENST00000344548 OR2F2O95006 317 aa11.2□□□□□ -0.62
CDC42-202ENST00000344548 RLN2P04090 185 aa11.2□□□□□ -0.62
CDC42-202ENST00000344548 DANCRP0C864 163 aa11.2□□□□□ -0.62
CDC42-202ENST00000344548 OR2F1Q13607 317 aa11.2□□□□□ -0.62
CDC42-202ENST00000344548 Q3ZCU0 254 aa11.2□□□□□ -0.62
CDC42-202ENST00000344548 RPL39P5Q59GN2 51 aa11.2□□□□□ -0.62
CDC42-202ENST00000344548 ZNF767PQ75MW2 155 aa11.2□□□□□ -0.62
CDC42-202ENST00000344548 C1orf87Q8N0U7 546 aa11.2□□□□□ -0.62
CDC42-202ENST00000344548 DMBX1Q8NFW5 382 aa11.2□□□□□ -0.62
CDC42-202ENST00000344548 GPR146Q96CH1 333 aa11.2□□□□□ -0.62
CDC42-202ENST00000344548 RPS10-NUDT3A0A1W2PQS6 291 aa11.19□□□□□ -0.62
CDC42-202ENST00000344548 DVL1O14640 695 aa11.19□□□□□ -0.62
CDC42-202ENST00000344548 RP2O75695 350 aa11.19□□□□□ -0.62
CDC42-202ENST00000344548 SERPINE2P07093 398 aa11.19□□□□□ -0.62
CDC42-202ENST00000344548 HKR1P10072 659 aa11.19□□□□□ -0.62
CDC42-202ENST00000344548 VDAC1P21796 283 aa11.19□□□□□ -0.62
CDC42-202ENST00000344548 CT45A1Q5HYN5 189 aa11.19□□□□□ -0.62
CDC42-202ENST00000344548 TRAT1Q6PIZ9 186 aa11.19□□□□□ -0.62
CDC42-202ENST00000344548 OR8H3Q8N146 312 aa11.19□□□□□ -0.62
CDC42-202ENST00000344548 INO80EQ8NBZ0 244 aaPredicted RBP11.19□□□□□ -0.62
CDC42-202ENST00000344548 CT45A3Q8NHU0 189 aa11.19□□□□□ -0.62
CDC42-202ENST00000344548 MAGT1Q9H0U3 335 aa11.19□□□□□ -0.62
CDC42-202ENST00000344548 IFI27L2Q9H2X8 130 aa11.19□□□□□ -0.62
CDC42-202ENST00000344548 JPT1Q9UK76 154 aa11.19□□□□□ -0.62
CDC42-202ENST00000344548 RCL1Q9Y2P8 373 aaKnown RBP11.19□□□□□ -0.62
CDC42-202ENST00000344548 MYO18BQ8IUG5 2567 aa11.19□□□□□ -0.62
CDC42-202ENST00000344548 MALRD1Q5VYJ5 2156 aa11.19□□□□□ -0.62
CDC42-202ENST00000344548 TRGV10A0A0A0MS01 117 aa11.19□□□□□ -0.62
CDC42-202ENST00000344548 A0A0D9SG52 128 aa11.19□□□□□ -0.62
CDC42-202ENST00000344548 YPEL1O60688 119 aa11.19□□□□□ -0.62
CDC42-202ENST00000344548 WNT2P09544 360 aa11.19□□□□□ -0.62
CDC42-202ENST00000344548 EPHA1P21709 976 aa11.19□□□□□ -0.62
CDC42-202ENST00000344548 NFYBP25208 207 aa11.19□□□□□ -0.62
CDC42-202ENST00000344548 POLR2GP62487 172 aaKnown RBP eCLIP11.19□□□□□ -0.62
CDC42-202ENST00000344548 HFEQ30201 348 aa11.19□□□□□ -0.62
CDC42-202ENST00000344548 AVPI1Q5T686 147 aa11.19□□□□□ -0.62
CDC42-202ENST00000344548 PRAMEF5Q5TYX0 476 aa11.19□□□□□ -0.62
CDC42-202ENST00000344548 TMEM200BQ69YZ2 307 aa11.19□□□□□ -0.62
CDC42-202ENST00000344548 YPEL2Q96QA6 119 aa11.19□□□□□ -0.62
CDC42-202ENST00000344548 NCOR1P1Q9H4R4 102 aa11.19□□□□□ -0.62
CDC42-202ENST00000344548 CYTL1Q9NRR1 136 aa11.19□□□□□ -0.62
CDC42-202ENST00000344548 NDUFS7O75251 213 aa11.18□□□□□ -0.62
CDC42-202ENST00000344548 TMEM50AO95807 157 aa11.18□□□□□ -0.62
CDC42-202ENST00000344548 SRPXP78539 464 aa11.18□□□□□ -0.62
CDC42-202ENST00000344548 ZNF816Q0VGE8 651 aaPredicted RBP11.18□□□□□ -0.62
CDC42-202ENST00000344548 NCR3LG1Q68D85 454 aa11.18□□□□□ -0.62
CDC42-202ENST00000344548 GFOD1Q9NXC2 390 aa11.18□□□□□ -0.62
CDC42-202ENST00000344548 LAMP3Q9UQV4 416 aa11.18□□□□□ -0.62
CDC42-202ENST00000344548 DOPEY1Q5JWR5 2465 aa11.18□□□□□ -0.62
CDC42-202ENST00000344548 NKX6-3A6NJ46 265 aa11.18□□□□□ -0.62
CDC42-202ENST00000344548 KIAA1324LA8MWY0 1029 aaPredicted RBP11.18□□□□□ -0.62
CDC42-202ENST00000344548 BCL2L11O43521 198 aa11.18□□□□□ -0.62
CDC42-202ENST00000344548 IGFBP2P18065 325 aa11.18□□□□□ -0.62
CDC42-202ENST00000344548 LPAR6P43657 344 aa11.18□□□□□ -0.62
CDC42-202ENST00000344548 RPL31P62899 125 aaKnown RBP11.18□□□□□ -0.62
CDC42-202ENST00000344548 CORO2AQ92828 525 aa11.18□□□□□ -0.62
CDC42-202ENST00000344548 AQP10Q96PS8 301 aa11.18□□□□□ -0.62
CDC42-202ENST00000344548 C11orf1Q9H5F2 150 aa11.18□□□□□ -0.62
CDC42-202ENST00000344548 CBLN4Q9NTU7 201 aa11.18□□□□□ -0.62
CDC42-202ENST00000344548 SVEP1Q4LDE5 3571 aa11.17□□□□□ -0.62
CDC42-202ENST00000344548 DOCK11Q5JSL3 2073 aa11.17□□□□□ -0.62
CDC42-202ENST00000344548 CLEC18AA5D8T8 446 aa11.17□□□□□ -0.62
CDC42-202ENST00000344548 CLDN1O95832 211 aa11.17□□□□□ -0.62
CDC42-202ENST00000344548 AGAP20933 346 aa11.17□□□□□ -0.62
CDC42-202ENST00000344548 S100GP29377 79 aa11.17□□□□□ -0.62
CDC42-202ENST00000344548 PPOXP50336 477 aa11.17□□□□□ -0.62
CDC42-202ENST00000344548 DLX1P56177 255 aa11.17□□□□□ -0.62
CDC42-202ENST00000344548 FAM74A1Q5RGS3 127 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms