RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 RAX2Q96IS3 184 aa12.94□□□□□ -0.34
UBE3B-202ENST00000342494 TIMP4Q99727 224 aa12.94□□□□□ -0.34
UBE3B-202ENST00000342494 PKIBQ9C010 78 aa12.94□□□□□ -0.34
UBE3B-202ENST00000342494 SLC25A17O43808 307 aa12.94□□□□□ -0.34
UBE3B-202ENST00000342494 OR4B1Q8NGF8 309 aa12.94□□□□□ -0.34
UBE3B-202ENST00000342494 OR10D4PQ8NGN7 298 aa12.94□□□□□ -0.34
UBE3B-202ENST00000342494 TMEM56-RWDD3S4R434 201 aa12.94□□□□□ -0.34
UBE3B-202ENST00000342494 ZNF645Q8N7E2 425 aa12.94□□□□□ -0.34
UBE3B-202ENST00000342494 TMEM140Q9NV12 185 aa12.94□□□□□ -0.34
UBE3B-202ENST00000342494 DEDDO75618 318 aa12.93□□□□□ -0.34
UBE3B-202ENST00000342494 TIAF1O95411 115 aa12.93□□□□□ -0.34
UBE3B-202ENST00000342494 SNRPCP09234 159 aaKnown RBP12.93□□□□□ -0.34
UBE3B-202ENST00000342494 TMEM91Q6ZNR0 172 aa12.93□□□□□ -0.34
UBE3B-202ENST00000342494 IL22RA2Q969J5 263 aa12.93□□□□□ -0.34
UBE3B-202ENST00000342494 AHCTF1Q8WYP5 2266 aa12.93□□□□□ -0.34
UBE3B-202ENST00000342494 MYOZ3Q8TDC0 251 aa12.93□□□□□ -0.34
UBE3B-202ENST00000342494 TMEM191AQ9H0A3 160 aa12.93□□□□□ -0.34
UBE3B-202ENST00000342494 TLNRD1Q9H1K6 362 aa12.93□□□□□ -0.34
UBE3B-202ENST00000342494 CASP8AP2Q9UKL3 1982 aa12.93□□□□□ -0.34
UBE3B-202ENST00000342494 CTSBP07858 339 aa12.93□□□□□ -0.34
UBE3B-202ENST00000342494 FAM216AQ8WUB2 273 aa12.93□□□□□ -0.34
UBE3B-202ENST00000342494 TMEM183BQ1AE95 376 aa12.93□□□□□ -0.34
UBE3B-202ENST00000342494 HLA-DRB5Q30154 266 aa12.93□□□□□ -0.34
UBE3B-202ENST00000342494 AMMECR1LQ6DCA0 310 aa12.93□□□□□ -0.34
UBE3B-202ENST00000342494 SYT8Q8NBV8 401 aa12.93□□□□□ -0.34
UBE3B-202ENST00000342494 KLK13Q9UKR3 277 aa12.93□□□□□ -0.34
UBE3B-202ENST00000342494 IGKV3D-15A0A087WSY6 115 aa12.93□□□□□ -0.34
UBE3B-202ENST00000342494 TRAV34A0A0B4J273 112 aa12.93□□□□□ -0.34
UBE3B-202ENST00000342494 UBE2L6O14933 153 aa12.93□□□□□ -0.34
UBE3B-202ENST00000342494 IGKV3-15P01624 115 aa12.93□□□□□ -0.34
UBE3B-202ENST00000342494 SCTP09683 121 aa12.93□□□□□ -0.34
UBE3B-202ENST00000342494 OR9G1Q8NH87 305 aa12.93□□□□□ -0.34
UBE3B-202ENST00000342494 ABHD17AQ96GS6 310 aa12.93□□□□□ -0.34
UBE3B-202ENST00000342494 APOBEC3AP31941 199 aaPredicted RBP12.92□□□□□ -0.34
UBE3B-202ENST00000342494 MFAP4P55083 255 aa12.92□□□□□ -0.34
UBE3B-202ENST00000342494 LGALSLQ3ZCW2 172 aaPredicted RBP12.92□□□□□ -0.34
UBE3B-202ENST00000342494 ISLRO14498 428 aa12.92□□□□□ -0.34
UBE3B-202ENST00000342494 FSTP19883 344 aa12.92□□□□□ -0.34
UBE3B-202ENST00000342494 GZMMP51124 257 aa12.92□□□□□ -0.34
UBE3B-202ENST00000342494 SELENOTP62341 195 aa12.92□□□□□ -0.34
UBE3B-202ENST00000342494 ATP5G2Q06055 141 aa12.92□□□□□ -0.34
UBE3B-202ENST00000342494 CLEC7AQ9BXN2 247 aa12.92□□□□□ -0.34
UBE3B-202ENST00000342494 LYRM2Q9NU23 88 aaPredicted RBP12.92□□□□□ -0.34
UBE3B-202ENST00000342494 UBR3Q6ZT12 1888 aa12.92□□□□□ -0.34
UBE3B-202ENST00000342494 CGB1A6NKQ9 187 aa12.92□□□□□ -0.34
UBE3B-202ENST00000342494 LINC00869P0C866 280 aa12.92□□□□□ -0.34
UBE3B-202ENST00000342494 COX5BP10606 129 aa12.92□□□□□ -0.34
UBE3B-202ENST00000342494 ELOBQ15370 118 aa12.92□□□□□ -0.34
UBE3B-202ENST00000342494 C8orf82Q6P1X6 216 aaPredicted RBP12.92□□□□□ -0.34
UBE3B-202ENST00000342494 LRP11Q86VZ4 500 aa12.92□□□□□ -0.34
UBE3B-202ENST00000342494 RALYQ9UKM9 306 aaKnown RBP12.92□□□□□ -0.34
UBE3B-202ENST00000342494 HIST1H1BP16401 226 aaKnown RBP12.92□□□□□ -0.34
UBE3B-202ENST00000342494 C19orf54Q5BKX5 351 aa12.92□□□□□ -0.34
UBE3B-202ENST00000342494 ZNF841Q6ZN19 808 aa12.92□□□□□ -0.34
UBE3B-202ENST00000342494 GPX7Q96SL4 187 aaPredicted RBP12.92□□□□□ -0.34
UBE3B-202ENST00000342494 MAP1LC3CQ9BXW4 147 aa12.92□□□□□ -0.34
UBE3B-202ENST00000342494 SNAI3Q3KNW1 292 aa12.91□□□□□ -0.34
UBE3B-202ENST00000342494 PNKDQ8N490 385 aa12.91□□□□□ -0.34
UBE3B-202ENST00000342494 MIXL1Q9H2W2 232 aa12.91□□□□□ -0.34
UBE3B-202ENST00000342494 V9GYH0 126 aa12.91□□□□□ -0.34
UBE3B-202ENST00000342494 ZNF318Q5VUA4 2279 aa12.91□□□□□ -0.34
UBE3B-202ENST00000342494 WISP3O95389 354 aaPredicted RBP12.91□□□□□ -0.34
UBE3B-202ENST00000342494 CLDN18P56856 261 aa12.91□□□□□ -0.34
UBE3B-202ENST00000342494 RFLNBQ8N5W9 214 aa12.91□□□□□ -0.34
UBE3B-202ENST00000342494 COL4A5P29400 1685 aa12.91□□□□□ -0.34
UBE3B-202ENST00000342494 FAM90A10PA6NDY2 464 aa12.91□□□□□ -0.34
UBE3B-202ENST00000342494 FAM90A18PA6NE21 464 aa12.91□□□□□ -0.34
UBE3B-202ENST00000342494 FAM90A16PA6NEW6 464 aa12.91□□□□□ -0.34
UBE3B-202ENST00000342494 C5orf52A6NGY3 159 aa12.91□□□□□ -0.34
UBE3B-202ENST00000342494 FAM90A20PA6NIJ5 464 aa12.91□□□□□ -0.34
UBE3B-202ENST00000342494 FAM90A8PA6NJQ4 464 aa12.91□□□□□ -0.34
UBE3B-202ENST00000342494 FAM90A7PA6NKC0 464 aa12.91□□□□□ -0.34
UBE3B-202ENST00000342494 FAM90A22PA8MWA6 464 aa12.91□□□□□ -0.34
UBE3B-202ENST00000342494 FAM90A12PA8MX19 464 aa12.91□□□□□ -0.34
UBE3B-202ENST00000342494 FAM90A5PA8MXJ8 464 aa12.91□□□□□ -0.34
UBE3B-202ENST00000342494 FAM90A23PA8MXZ1 464 aa12.91□□□□□ -0.34
UBE3B-202ENST00000342494 FAM90A15PP0C7V4 464 aa12.91□□□□□ -0.34
UBE3B-202ENST00000342494 FAM90A13PP0C7W8 464 aa12.91□□□□□ -0.34
UBE3B-202ENST00000342494 FAM90A14PP0C7W9 464 aa12.91□□□□□ -0.34
UBE3B-202ENST00000342494 FAM90A24PP0C7X0 464 aa12.91□□□□□ -0.34
UBE3B-202ENST00000342494 MAS1LP35410 378 aa12.91□□□□□ -0.34
UBE3B-202ENST00000342494 PPOXP50336 477 aa12.91□□□□□ -0.34
UBE3B-202ENST00000342494 CXorf66Q5JRM2 361 aaPredicted RBP12.91□□□□□ -0.34
UBE3B-202ENST00000342494 MIEN1Q9BRT3 115 aa12.91□□□□□ -0.34
UBE3B-202ENST00000342494 MRPS18AQ9NVS2 196 aaKnown RBP12.91□□□□□ -0.34
UBE3B-202ENST00000342494 PXMP4Q9Y6I8 212 aa12.91□□□□□ -0.34
UBE3B-202ENST00000342494 A0A1W2PP11 408 aa12.91□□□□□ -0.34
UBE3B-202ENST00000342494 H0Y980 276 aa12.91□□□□□ -0.34
UBE3B-202ENST00000342494 Q6ZT83 130 aa12.91□□□□□ -0.34
UBE3B-202ENST00000342494 DUX5Q96PT3 197 aa12.91□□□□□ -0.34
UBE3B-202ENST00000342494 DLL3Q9NYJ7 618 aa12.91□□□□□ -0.34
UBE3B-202ENST00000342494 IGLV1-36A0A0B4J1U3 117 aa12.91□□□□□ -0.34
UBE3B-202ENST00000342494 RELBQ01201 579 aa12.91□□□□□ -0.34
UBE3B-202ENST00000342494 FAM74A3Q4VXF1 159 aa12.91□□□□□ -0.34
UBE3B-202ENST00000342494 DNM1P46Q6ZS02 220 aa12.91□□□□□ -0.34
UBE3B-202ENST00000342494 MRPL30Q8TCC3 161 aaKnown RBP12.91□□□□□ -0.34
UBE3B-202ENST00000342494 C12orf57Q99622 126 aa12.91□□□□□ -0.34
UBE3B-202ENST00000342494 ADAMTSL1Q8N6G6 1762 aa12.91□□□□□ -0.34
UBE3B-202ENST00000342494 TMEM189A5PLL7 270 aa12.9□□□□□ -0.34
UBE3B-202ENST00000342494 RECKO95980 971 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms