RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 ZNF83P51522 516 aa10.64□□□□□ -0.71
SNRNP48-201ENST00000342415 FOXG1P55316 489 aaPredicted RBP10.64□□□□□ -0.71
SNRNP48-201ENST00000342415 ZNF441Q8N8Z8 693 aa10.64□□□□□ -0.71
SNRNP48-201ENST00000342415 COA4Q9NYJ1 87 aa10.64□□□□□ -0.71
SNRNP48-201ENST00000342415 IL17BQ9UHF5 180 aa10.64□□□□□ -0.71
SNRNP48-201ENST00000342415 TRBV6-7A0A0A0MS04 114 aa10.64□□□□□ -0.71
SNRNP48-201ENST00000342415 TCAPO15273 167 aa10.64□□□□□ -0.71
SNRNP48-201ENST00000342415 HAND1O96004 215 aa10.64□□□□□ -0.71
SNRNP48-201ENST00000342415 DPPA3Q6W0C5 159 aa10.64□□□□□ -0.71
SNRNP48-201ENST00000342415 LRRC29Q8WV35 223 aa10.64□□□□□ -0.71
SNRNP48-201ENST00000342415 TAF15Q92804 592 aaKnown RBP eCLIP10.64□□□□□ -0.71
SNRNP48-201ENST00000342415 RCC1LQ96I51 464 aaKnown RBP10.64□□□□□ -0.71
SNRNP48-201ENST00000342415 SPG11Q96JI7 2443 aa10.64□□□□□ -0.71
SNRNP48-201ENST00000342415 DUXBA0A1W2PPF3 345 aa10.64□□□□□ -0.71
SNRNP48-201ENST00000342415 ZG16O60844 167 aa10.64□□□□□ -0.71
SNRNP48-201ENST00000342415 OR2H2O95918 312 aa10.64□□□□□ -0.71
SNRNP48-201ENST00000342415 COX6A1P12074 109 aa10.64□□□□□ -0.71
SNRNP48-201ENST00000342415 DDTP30046 118 aa10.64□□□□□ -0.71
SNRNP48-201ENST00000342415 SSPNQ14714 243 aa10.64□□□□□ -0.71
SNRNP48-201ENST00000342415 VKORC1L1Q8N0U8 176 aa10.64□□□□□ -0.71
SNRNP48-201ENST00000342415 CPEB3Q8NE35 698 aaKnown RBP10.64□□□□□ -0.71
SNRNP48-201ENST00000342415 FREM1Q5H8C1 2179 aa10.63□□□□□ -0.71
SNRNP48-201ENST00000342415 ELOA3CA0A087WX78 387 aaPredicted RBP10.63□□□□□ -0.71
SNRNP48-201ENST00000342415 LRRC3CA6NJW4 275 aa10.63□□□□□ -0.71
SNRNP48-201ENST00000342415 J3QT63 122 aa10.63□□□□□ -0.71
SNRNP48-201ENST00000342415 SYNGR3O43761 229 aa10.63□□□□□ -0.71
SNRNP48-201ENST00000342415 TFF1P04155 84 aa10.63□□□□□ -0.71
SNRNP48-201ENST00000342415 CXCL1P09341 107 aa10.63□□□□□ -0.71
SNRNP48-201ENST00000342415 C21orf62-AS1Q17RA5 79 aa10.63□□□□□ -0.71
SNRNP48-201ENST00000342415 SMIM21Q3B7S5 101 aa10.63□□□□□ -0.71
SNRNP48-201ENST00000342415 EDARADDQ8WWZ3 215 aa10.63□□□□□ -0.71
SNRNP48-201ENST00000342415 RAB24Q969Q5 203 aa10.63□□□□□ -0.71
SNRNP48-201ENST00000342415 R3HDM4Q96D70 268 aa10.63□□□□□ -0.71
SNRNP48-201ENST00000342415 AP1S3Q96PC3 154 aa10.63□□□□□ -0.71
SNRNP48-201ENST00000342415 RNF122Q9H9V4 155 aa10.63□□□□□ -0.71
SNRNP48-201ENST00000342415 COL4A3Q01955 1670 aa10.63□□□□□ -0.71
SNRNP48-201ENST00000342415 H0Y980 276 aa10.63□□□□□ -0.71
SNRNP48-201ENST00000342415 NDUFS6O75380 124 aaKnown RBP10.63□□□□□ -0.71
SNRNP48-201ENST00000342415 CD55P08174 381 aa10.63□□□□□ -0.71
SNRNP48-201ENST00000342415 C10orf128Q5T292 105 aa10.63□□□□□ -0.71
SNRNP48-201ENST00000342415 UBALD2Q8IYN6 164 aa10.63□□□□□ -0.71
SNRNP48-201ENST00000342415 TAAR9Q96RI9 348 aa10.63□□□□□ -0.71
SNRNP48-201ENST00000342415 GLRX2Q9NS18 164 aa10.63□□□□□ -0.71
SNRNP48-201ENST00000342415 FKBP11Q9NYL4 201 aa10.63□□□□□ -0.71
SNRNP48-201ENST00000342415 IGHV3OR15-7A0A075B7D8 119 aa10.63□□□□□ -0.71
SNRNP48-201ENST00000342415 hCG_38984A0A1B0GV85 526 aa10.63□□□□□ -0.71
SNRNP48-201ENST00000342415 GRIFINA4D1Z8 144 aa10.63□□□□□ -0.71
SNRNP48-201ENST00000342415 C5orf52A6NGY3 159 aa10.63□□□□□ -0.71
SNRNP48-201ENST00000342415 B4DEV8 164 aa10.63□□□□□ -0.71
SNRNP48-201ENST00000342415 GLIPR1P48060 266 aa10.63□□□□□ -0.71
SNRNP48-201ENST00000342415 DEFB109BQ30KR1 87 aa10.63□□□□□ -0.71
SNRNP48-201ENST00000342415 TIPARPQ7Z3E1 657 aaKnown RBP10.63□□□□□ -0.71
SNRNP48-201ENST00000342415 OR2M7Q8NG81 312 aa10.63□□□□□ -0.71
SNRNP48-201ENST00000342415 OR4P4Q8NGL7 312 aa10.63□□□□□ -0.71
SNRNP48-201ENST00000342415 ZNF586Q9NXT0 402 aa10.63□□□□□ -0.71
SNRNP48-201ENST00000342415 IER3P46695 156 aa10.62□□□□□ -0.71
SNRNP48-201ENST00000342415 AMTP48728 403 aa10.62□□□□□ -0.71
SNRNP48-201ENST00000342415 CAMPP49913 170 aa10.62□□□□□ -0.71
SNRNP48-201ENST00000342415 PKIAP61925 76 aa10.62□□□□□ -0.71
SNRNP48-201ENST00000342415 SPEM2Q0P670 501 aa10.62□□□□□ -0.71
SNRNP48-201ENST00000342415 MRPL54Q6P161 138 aaKnown RBP10.62□□□□□ -0.71
SNRNP48-201ENST00000342415 C1orf210Q8IVY1 113 aa10.62□□□□□ -0.71
SNRNP48-201ENST00000342415 VN1R17PQ8TDU5 208 aa10.62□□□□□ -0.71
SNRNP48-201ENST00000342415 TAAR6Q96RI8 345 aa10.62□□□□□ -0.71
SNRNP48-201ENST00000342415 HSD17B10Q99714 261 aaKnown RBP10.62□□□□□ -0.71
SNRNP48-201ENST00000342415 VAMP8Q9BV40 100 aa10.62□□□□□ -0.71
SNRNP48-201ENST00000342415 VSIRQ9H7M9 311 aa10.62□□□□□ -0.71
SNRNP48-201ENST00000342415 LINC01387J3KSC0 135 aa10.62□□□□□ -0.71
SNRNP48-201ENST00000342415 OR10J4P0C629 311 aa10.62□□□□□ -0.71
SNRNP48-201ENST00000342415 CRISP2P16562 243 aa10.62□□□□□ -0.71
SNRNP48-201ENST00000342415 C22orf15Q8WYQ4 148 aa10.62□□□□□ -0.71
SNRNP48-201ENST00000342415 ATG101Q9BSB4 218 aa10.62□□□□□ -0.71
SNRNP48-201ENST00000342415 FBLN5Q9UBX5 448 aa10.62□□□□□ -0.71
SNRNP48-201ENST00000342415 SRSF10O75494 262 aaKnown RBP10.62□□□□□ -0.71
SNRNP48-201ENST00000342415 MT-CO3P00414 261 aa10.62□□□□□ -0.71
SNRNP48-201ENST00000342415 APELAP0DMC3 54 aa10.62□□□□□ -0.71
SNRNP48-201ENST00000342415 ZNF25P17030 456 aaPredicted RBP10.62□□□□□ -0.71
SNRNP48-201ENST00000342415 RNF151Q2KHN1 245 aa10.62□□□□□ -0.71
SNRNP48-201ENST00000342415 LEAP2Q969E1 77 aa10.62□□□□□ -0.71
SNRNP48-201ENST00000342415 ZDHHC16Q969W1 377 aa10.62□□□□□ -0.71
SNRNP48-201ENST00000342415 COMMD5Q9GZQ3 224 aa10.62□□□□□ -0.71
SNRNP48-201ENST00000342415 USF3Q68DE3 2245 aa10.62□□□□□ -0.71
SNRNP48-201ENST00000342415 FRMPD3Q5JV73 1810 aa10.62□□□□□ -0.71
SNRNP48-201ENST00000342415 ATRXP46100 2492 aa10.62□□□□□ -0.71
SNRNP48-201ENST00000342415 CTXND1A0A1B0GTU2 59 aa10.62□□□□□ -0.71
SNRNP48-201ENST00000342415 WNT9BO14905 357 aa10.62□□□□□ -0.71
SNRNP48-201ENST00000342415 ANOS1P23352 680 aa10.62□□□□□ -0.71
SNRNP48-201ENST00000342415 TNFSF4P23510 183 aa10.62□□□□□ -0.71
SNRNP48-201ENST00000342415 OR5B3Q8NH48 314 aa10.62□□□□□ -0.71
SNRNP48-201ENST00000342415 CMTM2Q8TAZ6 248 aa10.62□□□□□ -0.71
SNRNP48-201ENST00000342415 SAP25Q8TEE9 199 aa10.62□□□□□ -0.71
SNRNP48-201ENST00000342415 TMEM54Q969K7 222 aa10.62□□□□□ -0.71
SNRNP48-201ENST00000342415 PARLQ9H300 379 aa10.62□□□□□ -0.71
SNRNP48-201ENST00000342415 WDR54Q9H977 334 aa10.62□□□□□ -0.71
SNRNP48-201ENST00000342415 ARHGAP21Q5T5U3 1957 aa10.61□□□□□ -0.71
SNRNP48-201ENST00000342415 RRP8O43159 456 aaKnown RBP10.61□□□□□ -0.71
SNRNP48-201ENST00000342415 HIST1H2BKO60814 126 aa10.61□□□□□ -0.71
SNRNP48-201ENST00000342415 HIST1H2BJP06899 126 aa10.61□□□□□ -0.71
SNRNP48-201ENST00000342415 HIST1H2BOP23527 126 aa10.61□□□□□ -0.71
SNRNP48-201ENST00000342415 HIST1H2BBP33778 126 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms