RNA–Protein interactions for RNA: ENST00000342294.4

TRA2B-202, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best) BASIC

Gene TRA2B, Length 288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-202ENST00000342294 S100A13Q99584 98 aa12.73□□□□□ -0.37
TRA2B-202ENST00000342294 RNF5Q99942 180 aa12.73□□□□□ -0.37
TRA2B-202ENST00000342294 WFDC10AQ9H1F0 79 aa12.73□□□□□ -0.37
TRA2B-202ENST00000342294 SRD5A3Q9H8P0 318 aa12.73□□□□□ -0.37
TRA2B-202ENST00000342294 PEF1Q9UBV8 284 aaKnown RBP12.73□□□□□ -0.37
TRA2B-202ENST00000342294 SLC23A1Q9UHI7 598 aa12.73□□□□□ -0.37
TRA2B-202ENST00000342294 KIAA1109Q2LD37 5005 aa12.72□□□□□ -0.37
TRA2B-202ENST00000342294 CXorf65A6NEN9 183 aa12.72□□□□□ -0.37
TRA2B-202ENST00000342294 NUPR2A6NF83 97 aa12.72□□□□□ -0.37
TRA2B-202ENST00000342294 OR5H14A6NHG9 310 aa12.72□□□□□ -0.37
TRA2B-202ENST00000342294 H0YJW9 148 aa12.72□□□□□ -0.37
TRA2B-202ENST00000342294 OR2A4O95047 310 aa12.72□□□□□ -0.37
TRA2B-202ENST00000342294 CA2P00918 260 aa12.72□□□□□ -0.37
TRA2B-202ENST00000342294 TRBV12-3P01733 135 aa12.72□□□□□ -0.37
TRA2B-202ENST00000342294 MC5RP33032 325 aa12.72□□□□□ -0.37
TRA2B-202ENST00000342294 MRPL28Q13084 256 aaKnown RBP12.72□□□□□ -0.37
TRA2B-202ENST00000342294 DYRK1AQ13627 763 aa12.72□□□□□ -0.37
TRA2B-202ENST00000342294 TATDN3Q17R31 274 aa12.72□□□□□ -0.37
TRA2B-202ENST00000342294 CD300EQ496F6 205 aaPredicted RBP12.72□□□□□ -0.37
TRA2B-202ENST00000342294 OR5AN1Q8NGI8 311 aa12.72□□□□□ -0.37
TRA2B-202ENST00000342294 GATAD1Q8WUU5 269 aa12.72□□□□□ -0.37
TRA2B-202ENST00000342294 OVOL2Q9BRP0 275 aa12.72□□□□□ -0.37
TRA2B-202ENST00000342294 ZNF355PQ9NSJ1 428 aa12.72□□□□□ -0.37
TRA2B-202ENST00000342294 SLC2A8Q9NY64 477 aa12.72□□□□□ -0.37
TRA2B-202ENST00000342294 KCNIP1Q9NZI2 227 aa12.72□□□□□ -0.37
TRA2B-202ENST00000342294 METTL1Q9UBP6 276 aaKnown RBP12.72□□□□□ -0.37
TRA2B-202ENST00000342294 PEX16Q9Y5Y5 336 aa12.72□□□□□ -0.37
TRA2B-202ENST00000342294 DNAH10Q8IVF4 4471 aa12.71□□□□□ -0.37
TRA2B-202ENST00000342294 OR11H12B2RN74 326 aa12.71□□□□□ -0.37
TRA2B-202ENST00000342294 MAS1P04201 325 aa12.71□□□□□ -0.37
TRA2B-202ENST00000342294 GLAP06280 429 aa12.71□□□□□ -0.37
TRA2B-202ENST00000342294 GSTP1P09211 210 aaKnown RBP12.71□□□□□ -0.37
TRA2B-202ENST00000342294 BDKRB2P30411 391 aa12.71□□□□□ -0.37
TRA2B-202ENST00000342294 SNRPGP62308 76 aaKnown RBP12.71□□□□□ -0.37
TRA2B-202ENST00000342294 SSBP2P81877 361 aaPredicted RBP12.71□□□□□ -0.37
TRA2B-202ENST00000342294 PMS2P11Q13670 270 aa12.71□□□□□ -0.37
TRA2B-202ENST00000342294 GPR176Q14439 515 aa12.71□□□□□ -0.37
TRA2B-202ENST00000342294 DMKNQ6E0U4 476 aaPredicted RBP12.71□□□□□ -0.37
TRA2B-202ENST00000342294 CEMP1Q6PRD7 247 aaPredicted RBP12.71□□□□□ -0.37
TRA2B-202ENST00000342294 GLDNQ6ZMI3 551 aaPredicted RBP12.71□□□□□ -0.37
TRA2B-202ENST00000342294 OR5T1Q8NG75 326 aa12.71□□□□□ -0.37
TRA2B-202ENST00000342294 OR2AK2Q8NG84 335 aa12.71□□□□□ -0.37
TRA2B-202ENST00000342294 MRPL30Q8TCC3 161 aaKnown RBP12.71□□□□□ -0.37
TRA2B-202ENST00000342294 GHSRQ92847 366 aa12.71□□□□□ -0.37
TRA2B-202ENST00000342294 WASHC3Q9Y3C0 194 aa12.71□□□□□ -0.37
TRA2B-202ENST00000342294 SLC22A1O15245 554 aa12.7□□□□□ -0.38
TRA2B-202ENST00000342294 DEDDO75618 318 aa12.7□□□□□ -0.38
TRA2B-202ENST00000342294 CD2P06729 351 aa12.7□□□□□ -0.38
TRA2B-202ENST00000342294 GYS2P54840 703 aa12.7□□□□□ -0.38
TRA2B-202ENST00000342294 GNGT1P63211 74 aa12.7□□□□□ -0.38
TRA2B-202ENST00000342294 EWSR1Q01844 656 aaKnown RBP eCLIP12.7□□□□□ -0.38
TRA2B-202ENST00000342294 FXYD3Q14802 87 aa12.7□□□□□ -0.38
TRA2B-202ENST00000342294 RPL39P5Q59GN2 51 aa12.7□□□□□ -0.38
TRA2B-202ENST00000342294 MEDAGQ5VYS4 303 aa12.7□□□□□ -0.38
TRA2B-202ENST00000342294 SIGIRRQ6IA17 410 aa12.7□□□□□ -0.38
TRA2B-202ENST00000342294 GRPEL2Q8TAA5 225 aa12.7□□□□□ -0.38
TRA2B-202ENST00000342294 GPR148Q8TDV2 347 aa12.7□□□□□ -0.38
TRA2B-202ENST00000342294 MYCBPQ99417 103 aaPredicted RBP12.7□□□□□ -0.38
TRA2B-202ENST00000342294 IMPAD1Q9NX62 359 aa12.7□□□□□ -0.38
TRA2B-202ENST00000342294 ERVK13-1Q9NX77 482 aa12.7□□□□□ -0.38
TRA2B-202ENST00000342294 PIPOXQ9P0Z9 390 aa12.7□□□□□ -0.38
TRA2B-202ENST00000342294 RYR1P21817 5038 aa12.7□□□□□ -0.38
TRA2B-202ENST00000342294 UBE2QL1A1L167 161 aa12.69□□□□□ -0.38
TRA2B-202ENST00000342294 FAM90A7PA6NKC0 464 aa12.69□□□□□ -0.38
TRA2B-202ENST00000342294 FAM90A23PA8MXZ1 464 aa12.69□□□□□ -0.38
TRA2B-202ENST00000342294 RAB29O14966 203 aa12.69□□□□□ -0.38
TRA2B-202ENST00000342294 ST8SIA5O15466 376 aa12.69□□□□□ -0.38
TRA2B-202ENST00000342294 AIREO43918 545 aa12.69□□□□□ -0.38
TRA2B-202ENST00000342294 FUT3P21217 361 aa12.69□□□□□ -0.38
TRA2B-202ENST00000342294 AADACP22760 399 aa12.69□□□□□ -0.38
TRA2B-202ENST00000342294 GTF2A1P52655 376 aaPredicted RBP12.69□□□□□ -0.38
TRA2B-202ENST00000342294 GBX2P52951 348 aaPredicted RBP12.69□□□□□ -0.38
TRA2B-202ENST00000342294 PPP3R1P63098 170 aa12.69□□□□□ -0.38
TRA2B-202ENST00000342294 RPEL1Q2QD12 228 aa12.69□□□□□ -0.38
TRA2B-202ENST00000342294 AMIGO2Q86SJ2 522 aa12.69□□□□□ -0.38
TRA2B-202ENST00000342294 GALMQ96C23 342 aa12.69□□□□□ -0.38
TRA2B-202ENST00000342294 ORAI1Q96D31 301 aa12.69□□□□□ -0.38
TRA2B-202ENST00000342294 ZNF184Q99676 751 aaPredicted RBP12.69□□□□□ -0.38
TRA2B-202ENST00000342294 TINAGL1Q9GZM7 467 aaPredicted RBP12.69□□□□□ -0.38
TRA2B-202ENST00000342294 PEMTQ9UBM1 199 aa12.69□□□□□ -0.38
TRA2B-202ENST00000342294 H7C2Y5 167 aa12.68□□□□□ -0.38
TRA2B-202ENST00000342294 GPX5O75715 221 aa12.68□□□□□ -0.38
TRA2B-202ENST00000342294 SPDEFO95238 335 aa12.68□□□□□ -0.38
TRA2B-202ENST00000342294 IGFBP3P17936 291 aaPredicted RBP12.68□□□□□ -0.38
TRA2B-202ENST00000342294 FASP25445 335 aa12.68□□□□□ -0.38
TRA2B-202ENST00000342294 DEFA5Q01523 94 aa12.68□□□□□ -0.38
TRA2B-202ENST00000342294 HMGN3Q15651 99 aa12.68□□□□□ -0.38
TRA2B-202ENST00000342294 DEFB114Q30KQ6 69 aa12.68□□□□□ -0.38
TRA2B-202ENST00000342294 C6orf141Q5SZD1 244 aa12.68□□□□□ -0.38
TRA2B-202ENST00000342294 BVESQ8NE79 360 aa12.68□□□□□ -0.38
TRA2B-202ENST00000342294 OR14A2Q96R54 314 aa12.68□□□□□ -0.38
TRA2B-202ENST00000342294 PARP12Q9H0J9 701 aaKnown RBP12.68□□□□□ -0.38
TRA2B-202ENST00000342294 ZC4H2Q9NQZ6 224 aa12.68□□□□□ -0.38
TRA2B-202ENST00000342294 LRRC42Q9Y546 428 aa12.68□□□□□ -0.38
TRA2B-202ENST00000342294 RBMXL2O75526 392 aaKnown RBP12.67□□□□□ -0.38
TRA2B-202ENST00000342294 RIPK1Q13546 671 aa12.67□□□□□ -0.38
TRA2B-202ENST00000342294 XAF1Q6GPH4 301 aa12.67□□□□□ -0.38
TRA2B-202ENST00000342294 USMG5Q96IX5 58 aa12.67□□□□□ -0.38
TRA2B-202ENST00000342294 TSNAXQ99598 290 aaKnown RBP12.67□□□□□ -0.38
TRA2B-202ENST00000342294 AGMATQ9BSE5 352 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms