RNA–Protein interactions for RNA: ENST00000341594.9

SYNE1-201, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SYNE1, Length 26,584 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-201ENST00000341594 CMTM2Q8TAZ6 248 aa3.1□□□□□ -1.91
SYNE1-201ENST00000341594 SLC5A10A0PJK1 596 aa3.1□□□□□ -1.91
SYNE1-201ENST00000341594 SLC23A3Q6PIS1 610 aa3.1□□□□□ -1.91
SYNE1-201ENST00000341594 HEPN1Q6WQI6 88 aa3.1□□□□□ -1.91
SYNE1-201ENST00000341594 MRPL55Q7Z7F7 128 aaKnown RBP3.1□□□□□ -1.91
SYNE1-201ENST00000341594 GPR27Q9NS67 375 aa3.1□□□□□ -1.91
SYNE1-201ENST00000341594 DECR2Q9NUI1 292 aa3.1□□□□□ -1.91
SYNE1-201ENST00000341594 IGHV3OR16-13A0A075B7E8 117 aa3.1□□□□□ -1.91
SYNE1-201ENST00000341594 IGHV3-74A0A0B4J1X5 117 aa3.1□□□□□ -1.91
SYNE1-201ENST00000341594 NDUFB2O95178 105 aa3.1□□□□□ -1.91
SYNE1-201ENST00000341594 SRSF2Q01130 221 aaKnown RBP3.1□□□□□ -1.91
SYNE1-201ENST00000341594 SNAI3Q3KNW1 292 aa3.1□□□□□ -1.91
SYNE1-201ENST00000341594 IRF7Q92985 503 aa3.1□□□□□ -1.91
SYNE1-201ENST00000341594 KISS1RQ969F8 398 aaPredicted RBP3.1□□□□□ -1.91
SYNE1-201ENST00000341594 SERPINE2P07093 398 aa3.1□□□□□ -1.91
SYNE1-201ENST00000341594 ESDP10768 282 aa3.1□□□□□ -1.91
SYNE1-201ENST00000341594 AKR1A1P14550 325 aa3.1□□□□□ -1.91
SYNE1-201ENST00000341594 ZNF138P52744 262 aa3.1□□□□□ -1.91
SYNE1-201ENST00000341594 ZNF217O75362 1048 aa3.09□□□□□ -1.91
SYNE1-201ENST00000341594 VAMP5O95183 116 aa3.09□□□□□ -1.91
SYNE1-201ENST00000341594 SHHQ15465 462 aa3.09□□□□□ -1.91
SYNE1-201ENST00000341594 OR2Y1Q8NGV0 311 aa3.09□□□□□ -1.91
SYNE1-201ENST00000341594 MRAPQ8TCY5 172 aa3.09□□□□□ -1.91
SYNE1-201ENST00000341594 GALNT14Q96FL9 552 aa3.09□□□□□ -1.91
SYNE1-201ENST00000341594 TMEM160Q9NX00 188 aa3.09□□□□□ -1.91
SYNE1-201ENST00000341594 OR5B21A6NL26 309 aa3.09□□□□□ -1.91
SYNE1-201ENST00000341594 GFRA1P56159 465 aa3.09□□□□□ -1.91
SYNE1-201ENST00000341594 EDDM3AQ14507 147 aa3.09□□□□□ -1.91
SYNE1-201ENST00000341594 C5orf47Q569G3 176 aa3.09□□□□□ -1.91
SYNE1-201ENST00000341594 LPAR4Q99677 370 aa3.09□□□□□ -1.91
SYNE1-201ENST00000341594 PLEKHF2Q9H8W4 249 aa3.09□□□□□ -1.91
SYNE1-201ENST00000341594 ZNF337Q9Y3M9 751 aa3.09□□□□□ -1.91
SYNE1-201ENST00000341594 RAMP1O60894 148 aa3.09□□□□□ -1.91
SYNE1-201ENST00000341594 PRSS2P07478 247 aa3.09□□□□□ -1.91
SYNE1-201ENST00000341594 ARL16Q0P5N6 197 aa3.09□□□□□ -1.91
SYNE1-201ENST00000341594 MRPL49Q13405 166 aaKnown RBP3.09□□□□□ -1.91
SYNE1-201ENST00000341594 LDLRAD3Q86YD5 345 aa3.09□□□□□ -1.91
SYNE1-201ENST00000341594 TMEM255BQ8WV15 326 aa3.09□□□□□ -1.91
SYNE1-201ENST00000341594 MIEN1Q9BRT3 115 aa3.09□□□□□ -1.91
SYNE1-201ENST00000341594 CD3DP04234 171 aa3.09□□□□□ -1.91
SYNE1-201ENST00000341594 HIST1H1DP16402 221 aaKnown RBP3.09□□□□□ -1.91
SYNE1-201ENST00000341594 CA6P23280 308 aa3.09□□□□□ -1.91
SYNE1-201ENST00000341594 SGCBQ16585 318 aa3.09□□□□□ -1.91
SYNE1-201ENST00000341594 ZNF695Q8IW36 515 aa3.09□□□□□ -1.91
SYNE1-201ENST00000341594 VN1R17PQ8TDU5 208 aa3.09□□□□□ -1.91
SYNE1-201ENST00000341594 HIDE1A8MVS5 230 aa3.09□□□□□ -1.91
SYNE1-201ENST00000341594 WNT10BO00744 389 aa3.09□□□□□ -1.91
SYNE1-201ENST00000341594 FSTP19883 344 aa3.09□□□□□ -1.91
SYNE1-201ENST00000341594 OR5A1Q8NGJ0 315 aa3.09□□□□□ -1.91
SYNE1-201ENST00000341594 MRAP2Q96G30 205 aa3.09□□□□□ -1.91
SYNE1-201ENST00000341594 ZBP1Q9H171 429 aa3.09□□□□□ -1.91
SYNE1-201ENST00000341594 MRPL17Q9NRX2 175 aaKnown RBP3.09□□□□□ -1.91
SYNE1-201ENST00000341594 MED29Q9NX70 200 aa3.09□□□□□ -1.91
SYNE1-201ENST00000341594 PPP1R27Q86WC6 154 aa3.09□□□□□ -1.91
SYNE1-201ENST00000341594 LRRC75A-AS1Q8N1F1 130 aa3.09□□□□□ -1.91
SYNE1-201ENST00000341594 MGST2Q99735 147 aa3.09□□□□□ -1.91
SYNE1-201ENST00000341594 TAS2R4Q9NYW5 299 aa3.09□□□□□ -1.91
SYNE1-201ENST00000341594 B4GALT7Q9UBV7 327 aa3.09□□□□□ -1.91
SYNE1-201ENST00000341594 C1QTNF3-AMACRE9PGA6 284 aa3.09□□□□□ -1.91
SYNE1-201ENST00000341594 TP53I11O14683 189 aa3.09□□□□□ -1.91
SYNE1-201ENST00000341594 EIF4E2O60573 245 aaKnown RBP3.09□□□□□ -1.91
SYNE1-201ENST00000341594 IGHEP01854 428 aa3.09□□□□□ -1.91
SYNE1-201ENST00000341594 CYBAP13498 195 aa3.09□□□□□ -1.91
SYNE1-201ENST00000341594 SEC11AP67812 179 aa3.09□□□□□ -1.91
SYNE1-201ENST00000341594 TMEM186Q96B77 213 aa3.09□□□□□ -1.91
SYNE1-201ENST00000341594 RTL8AQ9BWD3 113 aa3.09□□□□□ -1.91
SYNE1-201ENST00000341594 DIRC3C9JPN6 131 aa3.09□□□□□ -1.91
SYNE1-201ENST00000341594 STPG1Q5TH74 334 aa3.09□□□□□ -1.91
SYNE1-201ENST00000341594 NR2C2APQ86WQ0 139 aa3.09□□□□□ -1.91
SYNE1-201ENST00000341594 TMEM189A5PLL7 270 aa3.09□□□□□ -1.91
SYNE1-201ENST00000341594 CD55P08174 381 aa3.09□□□□□ -1.91
SYNE1-201ENST00000341594 DHRS2Q13268 280 aa3.09□□□□□ -1.91
SYNE1-201ENST00000341594 SPRED2Q7Z698 418 aa3.09□□□□□ -1.91
SYNE1-201ENST00000341594 DCTN5Q9BTE1 182 aa3.09□□□□□ -1.91
SYNE1-201ENST00000341594 SUMO3P55854 103 aaPredicted RBP3.09□□□□□ -1.91
SYNE1-201ENST00000341594 GPR18Q14330 331 aa3.09□□□□□ -1.91
SYNE1-201ENST00000341594 PAQR9Q6ZVX9 377 aa3.09□□□□□ -1.91
SYNE1-201ENST00000341594 TMEM116Q8NCL8 245 aa3.09□□□□□ -1.91
SYNE1-201ENST00000341594 FAM90A9PA6NNJ1 464 aa3.09□□□□□ -1.91
SYNE1-201ENST00000341594 GCM2O75603 506 aaPredicted RBP3.09□□□□□ -1.91
SYNE1-201ENST00000341594 ATP5LO75964 103 aa3.09□□□□□ -1.91
SYNE1-201ENST00000341594 P2RY1P47900 373 aa3.09□□□□□ -1.91
SYNE1-201ENST00000341594 EWSR1Q01844 656 aaKnown RBP eCLIP3.09□□□□□ -1.91
SYNE1-201ENST00000341594 TDRG1Q3Y452 100 aa3.09□□□□□ -1.91
SYNE1-201ENST00000341594 LIAT1Q6ZQX7 453 aa3.09□□□□□ -1.91
SYNE1-201ENST00000341594 TMEM144Q7Z5S9 345 aa3.09□□□□□ -1.91
SYNE1-201ENST00000341594 TMEM191AQ9H0A3 160 aa3.09□□□□□ -1.91
SYNE1-201ENST00000341594 CHST8Q9H2A9 424 aa3.09□□□□□ -1.91
SYNE1-201ENST00000341594 NGFP01138 241 aa3.09□□□□□ -1.91
SYNE1-201ENST00000341594 KLK3P07288 261 aaPredicted RBP3.09□□□□□ -1.91
SYNE1-201ENST00000341594 TRAPPC6BQ86SZ2 158 aa3.09□□□□□ -1.91
SYNE1-201ENST00000341594 DIRC2Q96SL1 478 aa3.09□□□□□ -1.91
SYNE1-201ENST00000341594 NPFFR1Q9GZQ6 430 aa3.09□□□□□ -1.91
SYNE1-201ENST00000341594 TMEM8BA6NDV4 472 aa3.09□□□□□ -1.91
SYNE1-201ENST00000341594 TMEM238C9JI98 176 aa3.09□□□□□ -1.91
SYNE1-201ENST00000341594 OR1D5P58170 312 aa3.09□□□□□ -1.91
SYNE1-201ENST00000341594 ZNF92Q03936 586 aa3.09□□□□□ -1.91
SYNE1-201ENST00000341594 Q8NFD4 153 aa3.09□□□□□ -1.91
SYNE1-201ENST00000341594 CBLN4Q9NTU7 201 aa3.09□□□□□ -1.91
SYNE1-201ENST00000341594 IGHV3-23P01764 117 aa3.09□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 234.3 ms