RNA–Protein interactions for RNA: ENST00000341060.3

TDP2-201, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TDP2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-201ENST00000341060 CEBPDP49716 269 aaPredicted RBP12.25□□□□□ -0.45
TDP2-201ENST00000341060 FABP9Q0Z7S8 132 aa12.25□□□□□ -0.45
TDP2-201ENST00000341060 LRRC75BQ2VPJ9 315 aa12.25□□□□□ -0.45
TDP2-201ENST00000341060 ACSF3Q4G176 576 aaPredicted RBP12.25□□□□□ -0.45
TDP2-201ENST00000341060 SLC35E3Q7Z769 313 aa12.25□□□□□ -0.45
TDP2-201ENST00000341060 LILRB2Q8N423 598 aa12.25□□□□□ -0.45
TDP2-201ENST00000341060 ZBTB34Q8NCN2 500 aa12.25□□□□□ -0.45
TDP2-201ENST00000341060 GALMQ96C23 342 aa12.25□□□□□ -0.45
TDP2-201ENST00000341060 TVP23CQ96ET8 276 aa12.25□□□□□ -0.45
TDP2-201ENST00000341060 LAMA5O15230 3695 aa12.24□□□□□ -0.45
TDP2-201ENST00000341060 IGKV3-15P01624 115 aa12.24□□□□□ -0.45
TDP2-201ENST00000341060 FTH1P19P0C7X4 201 aa12.24□□□□□ -0.45
TDP2-201ENST00000341060 CBR1P16152 277 aa12.24□□□□□ -0.45
TDP2-201ENST00000341060 S100A12P80511 92 aa12.24□□□□□ -0.45
TDP2-201ENST00000341060 PRR14LQ5THK1 2151 aa12.24□□□□□ -0.45
TDP2-201ENST00000341060 MBD3L1Q8WWY6 194 aa12.24□□□□□ -0.45
TDP2-201ENST00000341060 HEATR1Q9H583 2144 aaKnown RBP12.24□□□□□ -0.45
TDP2-201ENST00000341060 VSIRQ9H7M9 311 aa12.24□□□□□ -0.45
TDP2-201ENST00000341060 OBP2BQ9NPH6 170 aa12.24□□□□□ -0.45
TDP2-201ENST00000341060 TINAGQ9UJW2 476 aa12.24□□□□□ -0.45
TDP2-201ENST00000341060 INTS1Q8N201 2190 aaKnown RBP12.24□□□□□ -0.45
TDP2-201ENST00000341060 OOEPA6NGQ2 149 aa12.23□□□□□ -0.45
TDP2-201ENST00000341060 C12orf77C9JDV5 145 aa12.23□□□□□ -0.45
TDP2-201ENST00000341060 HOXB1P14653 301 aaPredicted RBP12.23□□□□□ -0.45
TDP2-201ENST00000341060 ZNF726P1Q15940 193 aa12.23□□□□□ -0.45
TDP2-201ENST00000341060 SPANXN5Q5MJ07 72 aa12.23□□□□□ -0.45
TDP2-201ENST00000341060 ZNF787Q6DD87 383 aa12.23□□□□□ -0.45
TDP2-201ENST00000341060 SLC35E4Q6ICL7 350 aa12.23□□□□□ -0.45
TDP2-201ENST00000341060 OR1L1Q8NH94 360 aa12.23□□□□□ -0.45
TDP2-201ENST00000341060 WDR61Q9GZS3 305 aaKnown RBP12.23□□□□□ -0.45
TDP2-201ENST00000341060 TOLLIPQ9H0E2 274 aa12.23□□□□□ -0.45
TDP2-201ENST00000341060 OR2D2Q9H210 308 aa12.23□□□□□ -0.45
TDP2-201ENST00000341060 CISD1Q9NZ45 108 aaKnown RBP12.23□□□□□ -0.45
TDP2-201ENST00000341060 GNG13Q9P2W3 67 aa12.23□□□□□ -0.45
TDP2-201ENST00000341060 SPENQ96T58 3664 aaKnown RBP12.23□□□□□ -0.45
TDP2-201ENST00000341060 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.23□□□□□ -0.45
TDP2-201ENST00000341060 CXorf65A6NEN9 183 aa12.23□□□□□ -0.45
TDP2-201ENST00000341060 IFNA17P01571 189 aa12.23□□□□□ -0.45
TDP2-201ENST00000341060 BCL2P10415 239 aa12.23□□□□□ -0.45
TDP2-201ENST00000341060 COX5AP20674 150 aa12.23□□□□□ -0.45
TDP2-201ENST00000341060 OR3A1P47881 315 aa12.23□□□□□ -0.45
TDP2-201ENST00000341060 TNFRSF9Q07011 255 aa12.23□□□□□ -0.45
TDP2-201ENST00000341060 EIF4EBP1Q13541 118 aaPredicted RBP12.23□□□□□ -0.45
TDP2-201ENST00000341060 RBMS3Q6XE24 437 aaKnown RBP12.23□□□□□ -0.45
TDP2-201ENST00000341060 ASCL5Q7RTU5 278 aa12.23□□□□□ -0.45
TDP2-201ENST00000341060 C11orf53Q8IXP5 236 aa12.23□□□□□ -0.45
TDP2-201ENST00000341060 RCC1LQ96I51 464 aaKnown RBP12.23□□□□□ -0.45
TDP2-201ENST00000341060 TRIB1Q96RU8 372 aa12.23□□□□□ -0.45
TDP2-201ENST00000341060 SEBOXQ9HB31 216 aaPredicted RBP12.23□□□□□ -0.45
TDP2-201ENST00000341060 SIRT7Q9NRC8 400 aa12.23□□□□□ -0.45
TDP2-201ENST00000341060 HSPB7Q9UBY9 170 aa12.23□□□□□ -0.45
TDP2-201ENST00000341060 ZNF727A8MUV8 499 aa12.22□□□□□ -0.45
TDP2-201ENST00000341060 RAMP3O60896 148 aa12.22□□□□□ -0.45
TDP2-201ENST00000341060 P0C879 139 aa12.22□□□□□ -0.45
TDP2-201ENST00000341060 HOXC12P31275 282 aa12.22□□□□□ -0.45
TDP2-201ENST00000341060 CTAG1AP78358 180 aa12.22□□□□□ -0.45
TDP2-201ENST00000341060 ELOBQ15370 118 aa12.22□□□□□ -0.45
TDP2-201ENST00000341060 FAM90A2PQ658T7 463 aa12.22□□□□□ -0.45
TDP2-201ENST00000341060 TMEM14EPQ6UXP3 125 aa12.22□□□□□ -0.45
TDP2-201ENST00000341060 SSX7Q7RTT5 188 aa12.22□□□□□ -0.45
TDP2-201ENST00000341060 CXorf67Q86X51 503 aaPredicted RBP12.22□□□□□ -0.45
TDP2-201ENST00000341060 TCEAL7Q9BRU2 100 aa12.22□□□□□ -0.45
TDP2-201ENST00000341060 ZNF665Q9H7R5 613 aa12.22□□□□□ -0.45
TDP2-201ENST00000341060 ZFP92A6NM28 416 aa12.22□□□□□ -0.45
TDP2-201ENST00000341060 B4DEV8 164 aa12.22□□□□□ -0.45
TDP2-201ENST00000341060 AP4M1O00189 453 aa12.22□□□□□ -0.45
TDP2-201ENST00000341060 WNT9BO14905 357 aa12.22□□□□□ -0.45
TDP2-201ENST00000341060 IL2RGP31785 369 aa12.22□□□□□ -0.45
TDP2-201ENST00000341060 SLC38A11Q08AI6 406 aa12.22□□□□□ -0.45
TDP2-201ENST00000341060 TMEM41BQ5BJD5 291 aa12.22□□□□□ -0.45
TDP2-201ENST00000341060 ACP7Q6ZNF0 438 aa12.22□□□□□ -0.45
TDP2-201ENST00000341060 ZNF826PQ6ZT77 177 aa12.22□□□□□ -0.45
TDP2-201ENST00000341060 PRR7Q8TB68 274 aa12.22□□□□□ -0.45
TDP2-201ENST00000341060 PINX1Q96BK5 328 aaKnown RBP12.22□□□□□ -0.45
TDP2-201ENST00000341060 C5orf30Q96GV9 206 aa12.22□□□□□ -0.45
TDP2-201ENST00000341060 COQ2Q96H96 371 aa12.22□□□□□ -0.45
TDP2-201ENST00000341060 OR4C12Q96R67 309 aa12.22□□□□□ -0.45
TDP2-201ENST00000341060 HCFC1P51610 2035 aa12.21□□□□□ -0.45
TDP2-201ENST00000341060 HBZP02008 142 aa12.21□□□□□ -0.45
TDP2-201ENST00000341060 NQO2P16083 231 aa12.21□□□□□ -0.45
TDP2-201ENST00000341060 CD82P27701 267 aa12.21□□□□□ -0.45
TDP2-201ENST00000341060 AESQ08117 197 aa12.21□□□□□ -0.45
TDP2-201ENST00000341060 CATR1Q13166 79 aa12.21□□□□□ -0.45
TDP2-201ENST00000341060 MSMO1Q15800 293 aa12.21□□□□□ -0.45
TDP2-201ENST00000341060 LCN15Q6UWW0 184 aa12.21□□□□□ -0.45
TDP2-201ENST00000341060 CNEP1R1Q8N9A8 125 aa12.21□□□□□ -0.45
TDP2-201ENST00000341060 C1orf162Q8NEQ5 155 aaPredicted RBP12.21□□□□□ -0.45
TDP2-201ENST00000341060 Q8WTZ3 238 aa12.21□□□□□ -0.45
TDP2-201ENST00000341060 TAF15Q92804 592 aaKnown RBP eCLIP12.21□□□□□ -0.45
TDP2-201ENST00000341060 NINJ1Q92982 152 aa12.21□□□□□ -0.45
TDP2-201ENST00000341060 P2RX4Q99571 388 aa12.21□□□□□ -0.45
TDP2-201ENST00000341060 CXXC4Q9H2H0 198 aa12.21□□□□□ -0.45
TDP2-201ENST00000341060 RBKSQ9H477 322 aa12.21□□□□□ -0.45
TDP2-201ENST00000341060 UBE2L5PA0A1B0GUS4 154 aa12.2□□□□□ -0.46
TDP2-201ENST00000341060 S100A9P06702 114 aaKnown RBP12.2□□□□□ -0.46
TDP2-201ENST00000341060 G6PCP35575 357 aa12.2□□□□□ -0.46
TDP2-201ENST00000341060 KIR2DL2P43627 348 aaPredicted RBP12.2□□□□□ -0.46
TDP2-201ENST00000341060 RPS10P46783 165 aaKnown RBP12.2□□□□□ -0.46
TDP2-201ENST00000341060 GLIPR1P48060 266 aa12.2□□□□□ -0.46
TDP2-201ENST00000341060 RAB11AP62491 216 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms