RNA–Protein interactions for RNA: ENST00000340413.6

NUP43-201, Transcript of nucleoporin 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP43, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-201ENST00000340413 RGS13O14921 159 aa5.9□□□□□ -1.46
NUP43-201ENST00000340413 TMPRSS2O15393 492 aa5.9□□□□□ -1.46
NUP43-201ENST00000340413 AKR1C4P17516 323 aa5.9□□□□□ -1.46
NUP43-201ENST00000340413 NFYAP23511 347 aaPredicted RBP5.9□□□□□ -1.46
NUP43-201ENST00000340413 MC5RP33032 325 aa5.9□□□□□ -1.46
NUP43-201ENST00000340413 SP5Q6BEB4 398 aaPredicted RBP5.9□□□□□ -1.46
NUP43-201ENST00000340413 PRSS54Q6PEW0 395 aa5.9□□□□□ -1.46
NUP43-201ENST00000340413 BRICD5Q6PL45 260 aa5.9□□□□□ -1.46
NUP43-201ENST00000340413 ZNRF1Q8ND25 227 aa5.9□□□□□ -1.46
NUP43-201ENST00000340413 OR13D1Q8NGV5 346 aa5.9□□□□□ -1.46
NUP43-201ENST00000340413 SSBP3Q9BWW4 388 aaPredicted RBP5.9□□□□□ -1.46
NUP43-201ENST00000340413 TMEM133Q9H2Q1 129 aa5.9□□□□□ -1.46
NUP43-201ENST00000340413 OR1A1Q9P1Q5 309 aa5.9□□□□□ -1.46
NUP43-201ENST00000340413 DCHS1Q96JQ0 3298 aa5.9□□□□□ -1.46
NUP43-201ENST00000340413 HEATR1Q9H583 2144 aaKnown RBP5.9□□□□□ -1.46
NUP43-201ENST00000340413 IGKV1D-13A0A0B4J2D9 117 aa5.9□□□□□ -1.47
NUP43-201ENST00000340413 KIAA1324LA8MWY0 1029 aaPredicted RBP5.9□□□□□ -1.47
NUP43-201ENST00000340413 GOSR2O14653 212 aa5.9□□□□□ -1.47
NUP43-201ENST00000340413 TAAR5O14804 337 aa5.9□□□□□ -1.47
NUP43-201ENST00000340413 PITX3O75364 302 aa5.9□□□□□ -1.47
NUP43-201ENST00000340413 MED6O75586 246 aa5.9□□□□□ -1.47
NUP43-201ENST00000340413 CLDN1O95832 211 aa5.9□□□□□ -1.47
NUP43-201ENST00000340413 IGKV1-13P0DP09 117 aa5.9□□□□□ -1.47
NUP43-201ENST00000340413 GPR12P47775 334 aa5.9□□□□□ -1.47
NUP43-201ENST00000340413 PAX2Q02962 417 aa5.9□□□□□ -1.47
NUP43-201ENST00000340413 ANKRD55Q3KP44 614 aa5.9□□□□□ -1.47
NUP43-201ENST00000340413 GPR157Q5UAW9 335 aa5.9□□□□□ -1.47
NUP43-201ENST00000340413 PDPNQ86YL7 162 aa5.9□□□□□ -1.47
NUP43-201ENST00000340413 FAM71E2Q8N5Q1 922 aa5.9□□□□□ -1.47
NUP43-201ENST00000340413 ZBTB8BQ8NAP8 495 aaPredicted RBP5.9□□□□□ -1.47
NUP43-201ENST00000340413 OR4D5Q8NGN0 318 aa5.9□□□□□ -1.47
NUP43-201ENST00000340413 CCL28Q9NRJ3 127 aa5.9□□□□□ -1.47
NUP43-201ENST00000340413 J3QLI3 93 aa5.9□□□□□ -1.47
NUP43-201ENST00000340413 SPDEFO95238 335 aa5.9□□□□□ -1.47
NUP43-201ENST00000340413 IGHV1-8P0DP01 117 aa5.9□□□□□ -1.47
NUP43-201ENST00000340413 DNASE1P24855 282 aa5.9□□□□□ -1.47
NUP43-201ENST00000340413 RAB13P51153 203 aa5.9□□□□□ -1.47
NUP43-201ENST00000340413 HABP2Q14520 560 aaPredicted RBP5.9□□□□□ -1.47
NUP43-201ENST00000340413 STPG2Q8N412 459 aa5.9□□□□□ -1.47
NUP43-201ENST00000340413 OR4S2Q8NH73 311 aa5.9□□□□□ -1.47
NUP43-201ENST00000340413 HEXA-AS1Q9H8Q6 139 aa5.9□□□□□ -1.47
NUP43-201ENST00000340413 RANGRFQ9HD47 186 aaPredicted RBP5.9□□□□□ -1.47
NUP43-201ENST00000340413 POMT1Q9Y6A1 747 aa5.9□□□□□ -1.47
NUP43-201ENST00000340413 NAV3Q8IVL0 2385 aa5.9□□□□□ -1.47
NUP43-201ENST00000340413 A0A1W2PPR1 153 aa5.89□□□□□ -1.47
NUP43-201ENST00000340413 IL6RP08887 468 aaPredicted RBP5.89□□□□□ -1.47
NUP43-201ENST00000340413 OR5AC1P0C628 307 aa5.89□□□□□ -1.47
NUP43-201ENST00000340413 PRTN3P24158 256 aa5.89□□□□□ -1.47
NUP43-201ENST00000340413 PSMB6P28072 239 aa5.89□□□□□ -1.47
NUP43-201ENST00000340413 DUTP33316 252 aaKnown RBP5.89□□□□□ -1.47
NUP43-201ENST00000340413 EDDM3BP56851 147 aa5.89□□□□□ -1.47
NUP43-201ENST00000340413 C11orf87Q6NUJ2 197 aa5.89□□□□□ -1.47
NUP43-201ENST00000340413 OSR1Q8TAX0 266 aaPredicted RBP5.89□□□□□ -1.47
NUP43-201ENST00000340413 SECTM1Q8WVN6 248 aa5.89□□□□□ -1.47
NUP43-201ENST00000340413 TOMM40LQ969M1 308 aa5.89□□□□□ -1.47
NUP43-201ENST00000340413 AQP10Q96PS8 301 aa5.89□□□□□ -1.47
NUP43-201ENST00000340413 SRSF8Q9BRL6 282 aaKnown RBP5.89□□□□□ -1.47
NUP43-201ENST00000340413 PARD6GQ9BYG4 376 aaPredicted RBP5.89□□□□□ -1.47
NUP43-201ENST00000340413 SDHAF2Q9NX18 166 aa5.89□□□□□ -1.47
NUP43-201ENST00000340413 GNG12Q9UBI6 72 aa5.89□□□□□ -1.47
NUP43-201ENST00000340413 RNF222A6NCQ9 220 aa5.89□□□□□ -1.47
NUP43-201ENST00000340413 ODF3BA8MYP8 253 aa5.89□□□□□ -1.47
NUP43-201ENST00000340413 G3V3Q6 166 aa5.89□□□□□ -1.47
NUP43-201ENST00000340413 HSPB6O14558 160 aa5.89□□□□□ -1.47
NUP43-201ENST00000340413 RLN2P04090 185 aa5.89□□□□□ -1.47
NUP43-201ENST00000340413 NDUFB7P17568 137 aa5.89□□□□□ -1.47
NUP43-201ENST00000340413 VAMP1P23763 118 aa5.89□□□□□ -1.47
NUP43-201ENST00000340413 P2RY1P47900 373 aa5.89□□□□□ -1.47
NUP43-201ENST00000340413 GNB2P62879 340 aa5.89□□□□□ -1.47
NUP43-201ENST00000340413 EIF5AP63241 154 aaKnown RBP5.89□□□□□ -1.47
NUP43-201ENST00000340413 ZNF695Q8IW36 515 aa5.89□□□□□ -1.47
NUP43-201ENST00000340413 OR8H3Q8N146 312 aa5.89□□□□□ -1.47
NUP43-201ENST00000340413 BOLLQ8N9W6 283 aaKnown RBP5.89□□□□□ -1.47
NUP43-201ENST00000340413 OR52L2PQ8NGH6 319 aa5.89□□□□□ -1.47
NUP43-201ENST00000340413 CAPSLQ8WWF8 208 aa5.89□□□□□ -1.47
NUP43-201ENST00000340413 ST6GALNAC6Q969X2 333 aa5.89□□□□□ -1.47
NUP43-201ENST00000340413 C11orf1Q9H5F2 150 aa5.89□□□□□ -1.47
NUP43-201ENST00000340413 C19orf12Q9NSK7 152 aa5.89□□□□□ -1.47
NUP43-201ENST00000340413 LOC105371242A0A075B767 164 aa5.89□□□□□ -1.47
NUP43-201ENST00000340413 IGHV2-70DA0A0C4DH43 119 aa5.89□□□□□ -1.47
NUP43-201ENST00000340413 J3QR06 171 aa5.89□□□□□ -1.47
NUP43-201ENST00000340413 SOX15O60248 233 aa5.89□□□□□ -1.47
NUP43-201ENST00000340413 SSTR5P35346 364 aa5.89□□□□□ -1.47
NUP43-201ENST00000340413 MAS1LP35410 378 aa5.89□□□□□ -1.47
NUP43-201ENST00000340413 CEACAM3P40198 252 aa5.89□□□□□ -1.47
NUP43-201ENST00000340413 SMCO1Q147U7 214 aa5.89□□□□□ -1.47
NUP43-201ENST00000340413 MIDNQ504T8 468 aa5.89□□□□□ -1.47
NUP43-201ENST00000340413 TMEM177Q53S58 311 aa5.89□□□□□ -1.47
NUP43-201ENST00000340413 GGNBP1Q5YKI7 109 aa5.89□□□□□ -1.47
NUP43-201ENST00000340413 CLEC2AQ6UVW9 174 aa5.89□□□□□ -1.47
NUP43-201ENST00000340413 ODF3L1Q8IXM7 274 aa5.89□□□□□ -1.47
NUP43-201ENST00000340413 ZNF251Q9BRH9 671 aa5.89□□□□□ -1.47
NUP43-201ENST00000340413 CLEC7AQ9BXN2 247 aa5.89□□□□□ -1.47
NUP43-201ENST00000340413 OR2D2Q9H210 308 aa5.89□□□□□ -1.47
NUP43-201ENST00000340413 E5RGE8 158 aa5.88□□□□□ -1.47
NUP43-201ENST00000340413 PHF1O43189 567 aaPredicted RBP5.88□□□□□ -1.47
NUP43-201ENST00000340413 PPIHO43447 177 aaKnown RBP5.88□□□□□ -1.47
NUP43-201ENST00000340413 HRASP01112 189 aa5.88□□□□□ -1.47
NUP43-201ENST00000340413 IGLV1-47P01700 117 aa5.88□□□□□ -1.47
NUP43-201ENST00000340413 IGHV4-39P01824 125 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms