RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 BIRC6Q9NR09 4857 aa12.09□□□□□ -0.47
LINC01116-202ENST00000339037 UBE2QL1A1L167 161 aa12.09□□□□□ -0.47
LINC01116-202ENST00000339037 FAM90A7PA6NKC0 464 aa12.09□□□□□ -0.47
LINC01116-202ENST00000339037 FAM90A23PA8MXZ1 464 aa12.09□□□□□ -0.47
LINC01116-202ENST00000339037 SC5DO75845 299 aa12.09□□□□□ -0.47
LINC01116-202ENST00000339037 GP9P14770 177 aa12.09□□□□□ -0.47
LINC01116-202ENST00000339037 SPNP16150 400 aa12.09□□□□□ -0.47
LINC01116-202ENST00000339037 PPP1CCP36873 323 aaKnown RBP12.09□□□□□ -0.47
LINC01116-202ENST00000339037 ECSCRQ19T08 205 aa12.09□□□□□ -0.47
LINC01116-202ENST00000339037 LIN54Q6MZP7 749 aa12.09□□□□□ -0.47
LINC01116-202ENST00000339037 C5orf24Q7Z6I8 188 aa12.09□□□□□ -0.47
LINC01116-202ENST00000339037 DLX4Q92988 240 aaPredicted RBP12.09□□□□□ -0.47
LINC01116-202ENST00000339037 NABP2Q9BQ15 211 aa12.09□□□□□ -0.47
LINC01116-202ENST00000339037 GHITMQ9H3K2 345 aa12.09□□□□□ -0.47
LINC01116-202ENST00000339037 MBNL3Q9NUK0 354 aaKnown RBP12.09□□□□□ -0.47
LINC01116-202ENST00000339037 KCNIP1Q9NZI2 227 aa12.09□□□□□ -0.47
LINC01116-202ENST00000339037 KIAA1456Q9P272 454 aa12.09□□□□□ -0.47
LINC01116-202ENST00000339037 JPT1Q9UK76 154 aa12.09□□□□□ -0.47
LINC01116-202ENST00000339037 ERGIC3Q9Y282 383 aa12.09□□□□□ -0.47
LINC01116-202ENST00000339037 A0A1W2PN81 502 aa12.08□□□□□ -0.48
LINC01116-202ENST00000339037 LINC01619G3V211 115 aa12.08□□□□□ -0.48
LINC01116-202ENST00000339037 CDK1P06493 297 aa12.08□□□□□ -0.48
LINC01116-202ENST00000339037 FUT3P21217 361 aa12.08□□□□□ -0.48
LINC01116-202ENST00000339037 MAPK3P27361 379 aaPredicted RBP12.08□□□□□ -0.48
LINC01116-202ENST00000339037 CHRNA7P36544 502 aa12.08□□□□□ -0.48
LINC01116-202ENST00000339037 SLURP1P55000 103 aa12.08□□□□□ -0.48
LINC01116-202ENST00000339037 NDPQ00604 133 aa12.08□□□□□ -0.48
LINC01116-202ENST00000339037 ZNF554Q86TJ5 538 aa12.08□□□□□ -0.48
LINC01116-202ENST00000339037 ODF3L1Q8IXM7 274 aa12.08□□□□□ -0.48
LINC01116-202ENST00000339037 NPBQ8NG41 125 aa12.08□□□□□ -0.48
LINC01116-202ENST00000339037 OR52L2PQ8NGH6 319 aa12.08□□□□□ -0.48
LINC01116-202ENST00000339037 OR6Q1Q8NGQ2 317 aa12.08□□□□□ -0.48
LINC01116-202ENST00000339037 ARPC1AQ92747 370 aa12.08□□□□□ -0.48
LINC01116-202ENST00000339037 THRSPQ92748 146 aa12.08□□□□□ -0.48
LINC01116-202ENST00000339037 UQCC2Q9BRT2 126 aa12.08□□□□□ -0.48
LINC01116-202ENST00000339037 TOLLIPQ9H0E2 274 aa12.08□□□□□ -0.48
LINC01116-202ENST00000339037 CST11Q9H112 138 aa12.08□□□□□ -0.48
LINC01116-202ENST00000339037 NKX1-2Q9UD57 310 aaPredicted RBP12.08□□□□□ -0.48
LINC01116-202ENST00000339037 LSM2Q9Y333 95 aaKnown RBP12.08□□□□□ -0.48
LINC01116-202ENST00000339037 SAA2-SAA4A0A096LPE2 208 aa12.07□□□□□ -0.48
LINC01116-202ENST00000339037 NDUFA3O95167 84 aa12.07□□□□□ -0.48
LINC01116-202ENST00000339037 GLAP06280 429 aa12.07□□□□□ -0.48
LINC01116-202ENST00000339037 LGALS1P09382 135 aaKnown RBP12.07□□□□□ -0.48
LINC01116-202ENST00000339037 OR8U9P0C7N5 309 aa12.07□□□□□ -0.48
LINC01116-202ENST00000339037 SAA2P0DJI9 122 aaPredicted RBP12.07□□□□□ -0.48
LINC01116-202ENST00000339037 OR3A3P47888 321 aa12.07□□□□□ -0.48
LINC01116-202ENST00000339037 HTD2P86397 168 aa12.07□□□□□ -0.48
LINC01116-202ENST00000339037 ACSM3Q53FZ2 586 aa12.07□□□□□ -0.48
LINC01116-202ENST00000339037 OR10K2Q6IF99 312 aa12.07□□□□□ -0.48
LINC01116-202ENST00000339037 ACSM6Q6P461 480 aa12.07□□□□□ -0.48
LINC01116-202ENST00000339037 ZNF833PQ6ZTB9 187 aa12.07□□□□□ -0.48
LINC01116-202ENST00000339037 LRRTM1Q86UE6 522 aa12.07□□□□□ -0.48
LINC01116-202ENST00000339037 OR2AK2Q8NG84 335 aa12.07□□□□□ -0.48
LINC01116-202ENST00000339037 MRPL30Q8TCC3 161 aaKnown RBP12.07□□□□□ -0.48
LINC01116-202ENST00000339037 TMED9Q9BVK6 235 aa12.07□□□□□ -0.48
LINC01116-202ENST00000339037 MND1Q9BWT6 205 aa12.07□□□□□ -0.48
LINC01116-202ENST00000339037 KCNK15Q9H427 330 aa12.07□□□□□ -0.48
LINC01116-202ENST00000339037 FOXA2Q9Y261 457 aaPredicted RBP12.07□□□□□ -0.48
LINC01116-202ENST00000339037 A3GALT2U3KPV4 340 aa12.07□□□□□ -0.48
LINC01116-202ENST00000339037 IGHV4OR15-8A0A075B7B6 117 aa12.06□□□□□ -0.48
LINC01116-202ENST00000339037 A0A087WW49 117 aa12.06□□□□□ -0.48
LINC01116-202ENST00000339037 TRIM64CA6NLI5 447 aa12.06□□□□□ -0.48
LINC01116-202ENST00000339037 PTGES3LE9PB15 166 aa12.06□□□□□ -0.48
LINC01116-202ENST00000339037 SOX15O60248 233 aa12.06□□□□□ -0.48
LINC01116-202ENST00000339037 YPEL1O60688 119 aa12.06□□□□□ -0.48
LINC01116-202ENST00000339037 PDCD6O75340 191 aa12.06□□□□□ -0.48
LINC01116-202ENST00000339037 RGS11O94810 467 aa12.06□□□□□ -0.48
LINC01116-202ENST00000339037 C19orf54Q5BKX5 351 aa12.06□□□□□ -0.48
LINC01116-202ENST00000339037 RBM48Q5RL73 367 aaKnown RBP12.06□□□□□ -0.48
LINC01116-202ENST00000339037 C6orf141Q5SZD1 244 aa12.06□□□□□ -0.48
LINC01116-202ENST00000339037 RNLSQ5VYX0 342 aa12.06□□□□□ -0.48
LINC01116-202ENST00000339037 TCTEX1D1Q8N7M0 179 aa12.06□□□□□ -0.48
LINC01116-202ENST00000339037 CASTOR1Q8WTX7 329 aa12.06□□□□□ -0.48
LINC01116-202ENST00000339037 GALMQ96C23 342 aa12.06□□□□□ -0.48
LINC01116-202ENST00000339037 YPEL2Q96QA6 119 aa12.06□□□□□ -0.48
LINC01116-202ENST00000339037 VCXQ9H320 206 aa12.06□□□□□ -0.48
LINC01116-202ENST00000339037 GAR1Q9NY12 217 aaKnown RBP12.06□□□□□ -0.48
LINC01116-202ENST00000339037 FBXO7Q9Y3I1 522 aa12.06□□□□□ -0.48
LINC01116-202ENST00000339037 LCE6AA0A183 80 aa12.05□□□□□ -0.48
LINC01116-202ENST00000339037 CRIP2P52943 208 aaPredicted RBP12.05□□□□□ -0.48
LINC01116-202ENST00000339037 AQP4P55087 323 aa12.05□□□□□ -0.48
LINC01116-202ENST00000339037 PITPNAQ00169 270 aa12.05□□□□□ -0.48
LINC01116-202ENST00000339037 PLGLAQ15195 96 aa12.05□□□□□ -0.48
LINC01116-202ENST00000339037 SRSF7Q16629 238 aaKnown RBP eCLIP12.05□□□□□ -0.48
LINC01116-202ENST00000339037 ZNF660Q6AZW8 331 aaPredicted RBP12.05□□□□□ -0.48
LINC01116-202ENST00000339037 PYHIN1Q6K0P9 492 aa12.05□□□□□ -0.48
LINC01116-202ENST00000339037 FAM131AQ6UXB0 335 aa12.05□□□□□ -0.48
LINC01116-202ENST00000339037 MS4A15Q8N5U1 240 aa12.05□□□□□ -0.48
LINC01116-202ENST00000339037 ABHD5Q8WTS1 349 aa12.05□□□□□ -0.48
LINC01116-202ENST00000339037 NRG4Q8WWG1 115 aa12.05□□□□□ -0.48
LINC01116-202ENST00000339037 OR4C12Q96R67 309 aa12.05□□□□□ -0.48
LINC01116-202ENST00000339037 SULT4A1Q9BR01 284 aa12.05□□□□□ -0.48
LINC01116-202ENST00000339037 NICN1Q9BSH3 213 aa12.05□□□□□ -0.48
LINC01116-202ENST00000339037 TPSG1Q9NRR2 321 aa12.05□□□□□ -0.48
LINC01116-202ENST00000339037 GHRLQ9UBU3 117 aa12.05□□□□□ -0.48
LINC01116-202ENST00000339037 UBBP0CG47 229 aa12.04□□□□□ -0.48
LINC01116-202ENST00000339037 CX3CL1P78423 397 aa12.04□□□□□ -0.48
LINC01116-202ENST00000339037 UNC119Q13432 240 aa12.04□□□□□ -0.48
LINC01116-202ENST00000339037 SPHARQ15513 63 aa12.04□□□□□ -0.48
LINC01116-202ENST00000339037 MED22Q15528 200 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms