RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 TMEM147Q9BVK8 224 aa5.37□□□□□ -1.55
PRKDC-202ENST00000338368 OR1A1Q9P1Q5 309 aa5.37□□□□□ -1.55
PRKDC-202ENST00000338368 OBSL1O75147 1896 aa5.37□□□□□ -1.55
PRKDC-202ENST00000338368 RBFOX3A6NFN3 312 aa5.37□□□□□ -1.55
PRKDC-202ENST00000338368 DEFA4P12838 97 aa5.37□□□□□ -1.55
PRKDC-202ENST00000338368 NAT1P18440 290 aa5.37□□□□□ -1.55
PRKDC-202ENST00000338368 A0A1W2PPE3 182 aa5.37□□□□□ -1.55
PRKDC-202ENST00000338368 OR7C2O60412 319 aa5.37□□□□□ -1.55
PRKDC-202ENST00000338368 CLDN14O95500 239 aa5.37□□□□□ -1.55
PRKDC-202ENST00000338368 SLC25A6P12236 298 aa5.37□□□□□ -1.55
PRKDC-202ENST00000338368 FOXL2NBQ6ZUU3 175 aa5.37□□□□□ -1.55
PRKDC-202ENST00000338368 POC1AQ8NBT0 407 aa5.37□□□□□ -1.55
PRKDC-202ENST00000338368 OR4S2Q8NH73 311 aa5.37□□□□□ -1.55
PRKDC-202ENST00000338368 H0Y980 276 aa5.37□□□□□ -1.55
PRKDC-202ENST00000338368 SMPD2O60906 423 aa5.37□□□□□ -1.55
PRKDC-202ENST00000338368 TAS2R45P59539 299 aa5.37□□□□□ -1.55
PRKDC-202ENST00000338368 TLE1Q04724 770 aa5.37□□□□□ -1.55
PRKDC-202ENST00000338368 CCL13Q99616 98 aa5.37□□□□□ -1.55
PRKDC-202ENST00000338368 IL19Q9UHD0 177 aa5.37□□□□□ -1.55
PRKDC-202ENST00000338368 PQLC2LA1A4F0 135 aa5.37□□□□□ -1.55
PRKDC-202ENST00000338368 MAP1LC3B2A6NCE7 125 aa5.37□□□□□ -1.55
PRKDC-202ENST00000338368 FGF2P09038 288 aa5.37□□□□□ -1.55
PRKDC-202ENST00000338368 OTX1P32242 354 aaPredicted RBP5.37□□□□□ -1.55
PRKDC-202ENST00000338368 IZUMO4Q1ZYL8 232 aa5.37□□□□□ -1.55
PRKDC-202ENST00000338368 MAP1LC3BQ9GZQ8 125 aa5.37□□□□□ -1.55
PRKDC-202ENST00000338368 GAR1Q9NY12 217 aaKnown RBP5.37□□□□□ -1.55
PRKDC-202ENST00000338368 HCFC1P51610 2035 aa5.37□□□□□ -1.55
PRKDC-202ENST00000338368 TRAV14DV4A0A0A6YYC5 116 aa5.37□□□□□ -1.55
PRKDC-202ENST00000338368 ABHD17AQ96GS6 310 aa5.37□□□□□ -1.55
PRKDC-202ENST00000338368 QRFPP83859 136 aa5.37□□□□□ -1.55
PRKDC-202ENST00000338368 CLEC12BQ2HXU8 276 aa5.37□□□□□ -1.55
PRKDC-202ENST00000338368 OR1L1Q8NH94 360 aa5.37□□□□□ -1.55
PRKDC-202ENST00000338368 RNF126Q9BV68 326 aa5.37□□□□□ -1.55
PRKDC-202ENST00000338368 COX7A1P24310 79 aa5.36□□□□□ -1.55
PRKDC-202ENST00000338368 ARL3P36405 182 aa5.36□□□□□ -1.55
PRKDC-202ENST00000338368 ZNF561Q8N587 486 aa5.36□□□□□ -1.55
PRKDC-202ENST00000338368 FAM24BQ8N5W8 94 aa5.36□□□□□ -1.55
PRKDC-202ENST00000338368 ATP5SQ99766 215 aa5.36□□□□□ -1.55
PRKDC-202ENST00000338368 ZNF251Q9BRH9 671 aa5.36□□□□□ -1.55
PRKDC-202ENST00000338368 IGKV1-12A0A0C4DH73 117 aa5.36□□□□□ -1.55
PRKDC-202ENST00000338368 IGKV1D-12P01611 117 aa5.36□□□□□ -1.55
PRKDC-202ENST00000338368 C9orf106Q8NAJ2 232 aa5.36□□□□□ -1.55
PRKDC-202ENST00000338368 LRFN3Q9BTN0 628 aa5.36□□□□□ -1.55
PRKDC-202ENST00000338368 MMP24Q9Y5R2 645 aa5.36□□□□□ -1.55
PRKDC-202ENST00000338368 KIAA1549Q9HCM3 1950 aa5.36□□□□□ -1.55
PRKDC-202ENST00000338368 HOXD11P31277 338 aaPredicted RBP5.36□□□□□ -1.55
PRKDC-202ENST00000338368 NDUFA6P56556 154 aa5.36□□□□□ -1.55
PRKDC-202ENST00000338368 ACSF3Q4G176 576 aaPredicted RBP5.36□□□□□ -1.55
PRKDC-202ENST00000338368 THYN1Q9P016 225 aa5.36□□□□□ -1.55
PRKDC-202ENST00000338368 CUL9Q8IWT3 2517 aa5.36□□□□□ -1.55
PRKDC-202ENST00000338368 MUC6Q6W4X9 2439 aa5.36□□□□□ -1.55
PRKDC-202ENST00000338368 CLDN34H7C241 214 aa5.36□□□□□ -1.55
PRKDC-202ENST00000338368 HPRT1P00492 218 aa5.36□□□□□ -1.55
PRKDC-202ENST00000338368 MPZP25189 248 aa5.36□□□□□ -1.55
PRKDC-202ENST00000338368 CDC34P49427 236 aaPredicted RBP5.36□□□□□ -1.55
PRKDC-202ENST00000338368 FFAR4Q5NUL3 377 aa5.36□□□□□ -1.55
PRKDC-202ENST00000338368 PROK2Q9HC23 129 aa5.36□□□□□ -1.55
PRKDC-202ENST00000338368 AMMECR1Q9Y4X0 333 aaPredicted RBP5.36□□□□□ -1.55
PRKDC-202ENST00000338368 OR5G3P0C626 314 aa5.36□□□□□ -1.55
PRKDC-202ENST00000338368 CECR9P0C854 216 aa5.36□□□□□ -1.55
PRKDC-202ENST00000338368 UBE2G2P60604 165 aa5.36□□□□□ -1.55
PRKDC-202ENST00000338368 MOB3BQ86TA1 216 aa5.36□□□□□ -1.55
PRKDC-202ENST00000338368 RAB1CQ92928 201 aa5.36□□□□□ -1.55
PRKDC-202ENST00000338368 RANP62826 216 aaKnown RBP5.36□□□□□ -1.55
PRKDC-202ENST00000338368 PEAR1Q5VY43 1037 aaPredicted RBP5.36□□□□□ -1.55
PRKDC-202ENST00000338368 DRAM1Q8N682 238 aa5.36□□□□□ -1.55
PRKDC-202ENST00000338368 UBAC2Q8NBM4 344 aa5.36□□□□□ -1.55
PRKDC-202ENST00000338368 MARS2Q96GW9 593 aaKnown RBP5.36□□□□□ -1.55
PRKDC-202ENST00000338368 H0YL77 283 aa5.36□□□□□ -1.55
PRKDC-202ENST00000338368 GLRXP35754 106 aa5.36□□□□□ -1.55
PRKDC-202ENST00000338368 LBHQ53QV2 105 aaPredicted RBP5.36□□□□□ -1.55
PRKDC-202ENST00000338368 DHRS11Q6UWP2 260 aa5.36□□□□□ -1.55
PRKDC-202ENST00000338368 BTNL8Q6UX41 500 aa5.36□□□□□ -1.55
PRKDC-202ENST00000338368 C1QL1O75973 258 aa5.36□□□□□ -1.55
PRKDC-202ENST00000338368 OPN1MWP04001 364 aa5.36□□□□□ -1.55
PRKDC-202ENST00000338368 OPN1MW2P0DN77 364 aa5.36□□□□□ -1.55
PRKDC-202ENST00000338368 OPN1MW3P0DN78 364 aa5.36□□□□□ -1.55
PRKDC-202ENST00000338368 LHFPL1Q86WI0 220 aa5.36□□□□□ -1.55
PRKDC-202ENST00000338368 DAZAP1Q96EP5 407 aaKnown RBP5.36□□□□□ -1.55
PRKDC-202ENST00000338368 C7orf77A4D0Y5 90 aa5.36□□□□□ -1.55
PRKDC-202ENST00000338368 MMP9P14780 707 aa5.36□□□□□ -1.55
PRKDC-202ENST00000338368 RAB4AP20338 218 aa5.36□□□□□ -1.55
PRKDC-202ENST00000338368 BIVMQ86UB2 503 aa5.36□□□□□ -1.55
PRKDC-202ENST00000338368 ZNF645Q8N7E2 425 aa5.36□□□□□ -1.55
PRKDC-202ENST00000338368 MARVELD3Q96A59 401 aa5.36□□□□□ -1.55
PRKDC-202ENST00000338368 SLC25A22Q9H936 323 aa5.36□□□□□ -1.55
PRKDC-202ENST00000338368 E9PLN8 166 aa5.36□□□□□ -1.55
PRKDC-202ENST00000338368 RPL31P62899 125 aaKnown RBP5.36□□□□□ -1.55
PRKDC-202ENST00000338368 TIMM23BQ5SRD1 257 aa5.36□□□□□ -1.55
PRKDC-202ENST00000338368 CBLN2Q8IUK8 224 aa5.36□□□□□ -1.55
PRKDC-202ENST00000338368 OR13D1Q8NGV5 346 aa5.36□□□□□ -1.55
PRKDC-202ENST00000338368 JMJD8Q96S16 334 aa5.36□□□□□ -1.55
PRKDC-202ENST00000338368 IL18BPO95998 194 aa5.35□□□□□ -1.55
PRKDC-202ENST00000338368 NRIP2Q9BQI9 281 aa5.35□□□□□ -1.55
PRKDC-202ENST00000338368 SFXN3Q9BWM7 321 aa5.35□□□□□ -1.55
PRKDC-202ENST00000338368 SMIM6P0DI80 62 aa5.35□□□□□ -1.55
PRKDC-202ENST00000338368 PPP1R2P9O14990 202 aa5.35□□□□□ -1.55
PRKDC-202ENST00000338368 SIAH2O43255 324 aa5.35□□□□□ -1.55
PRKDC-202ENST00000338368 MMP7P09237 267 aaPredicted RBP5.35□□□□□ -1.55
PRKDC-202ENST00000338368 GCSAMQ8N6F7 178 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms