RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 GDF9O60383 454 aa11.44□□□□□ -0.58
COL2A1-201ENST00000337299 FCGR3BO75015 233 aa11.44□□□□□ -0.58
COL2A1-201ENST00000337299 SRSF10O75494 262 aaKnown RBP11.44□□□□□ -0.58
COL2A1-201ENST00000337299 CD55P08174 381 aa11.44□□□□□ -0.58
COL2A1-201ENST00000337299 TRA2AQ13595 282 aaKnown RBP eCLIP11.44□□□□□ -0.58
COL2A1-201ENST00000337299 PSG5Q15238 335 aa11.44□□□□□ -0.58
COL2A1-201ENST00000337299 C9orf40Q8IXQ3 194 aa11.44□□□□□ -0.58
COL2A1-201ENST00000337299 LRRC61Q9BV99 259 aa11.44□□□□□ -0.58
COL2A1-201ENST00000337299 DUSP23Q9BVJ7 150 aa11.44□□□□□ -0.58
COL2A1-201ENST00000337299 TMEM106BQ9NUM4 274 aa11.44□□□□□ -0.58
COL2A1-201ENST00000337299 IGHEP01854 428 aa11.44□□□□□ -0.58
COL2A1-201ENST00000337299 OR5AL1P0C617 328 aa11.44□□□□□ -0.58
COL2A1-201ENST00000337299 TMEM11P17152 192 aa11.44□□□□□ -0.58
COL2A1-201ENST00000337299 ARG2P78540 354 aa11.44□□□□□ -0.58
COL2A1-201ENST00000337299 C10orf91Q5T1B1 145 aa11.44□□□□□ -0.58
COL2A1-201ENST00000337299 ZNF818PQ6ZRF7 136 aa11.44□□□□□ -0.58
COL2A1-201ENST00000337299 SSX8Q7RTT4 187 aa11.44□□□□□ -0.58
COL2A1-201ENST00000337299 KCNK17Q96T54 332 aa11.44□□□□□ -0.58
COL2A1-201ENST00000337299 SH3BGRL2Q9UJC5 107 aa11.44□□□□□ -0.58
COL2A1-201ENST00000337299 TBL2Q9Y4P3 447 aaKnown RBP11.44□□□□□ -0.58
COL2A1-201ENST00000337299 WDR87Q6ZQQ6 2873 aa11.44□□□□□ -0.58
COL2A1-201ENST00000337299 MS4A18H0YCH9 400 aa11.43□□□□□ -0.58
COL2A1-201ENST00000337299 PDE6DO43924 150 aa11.43□□□□□ -0.58
COL2A1-201ENST00000337299 SSR4P51571 173 aa11.43□□□□□ -0.58
COL2A1-201ENST00000337299 MS4A18Q3C1V0 323 aa11.43□□□□□ -0.58
COL2A1-201ENST00000337299 ZNF573Q86YE8 665 aa11.43□□□□□ -0.58
COL2A1-201ENST00000337299 OR6X1Q8NH79 312 aa11.43□□□□□ -0.58
COL2A1-201ENST00000337299 PPP1R35Q8TAP8 253 aa11.43□□□□□ -0.58
COL2A1-201ENST00000337299 TMEM170AQ8WVE7 144 aa11.43□□□□□ -0.58
COL2A1-201ENST00000337299 BCL2L2Q92843 193 aaPredicted RBP11.43□□□□□ -0.58
COL2A1-201ENST00000337299 C1QTNF9BB2RNN3 333 aa11.43□□□□□ -0.58
COL2A1-201ENST00000337299 PLPPR5Q32ZL2 321 aa11.43□□□□□ -0.58
COL2A1-201ENST00000337299 TMEM211Q6ICI0 200 aa11.43□□□□□ -0.58
COL2A1-201ENST00000337299 GALMQ96C23 342 aa11.43□□□□□ -0.58
COL2A1-201ENST00000337299 DPRXA6NFQ7 191 aa11.43□□□□□ -0.58
COL2A1-201ENST00000337299 TNFSF14O43557 240 aa11.43□□□□□ -0.58
COL2A1-201ENST00000337299 ZIC3O60481 467 aa11.43□□□□□ -0.58
COL2A1-201ENST00000337299 TNFSF4P23510 183 aa11.43□□□□□ -0.58
COL2A1-201ENST00000337299 ZNF137PP52743 207 aa11.43□□□□□ -0.58
COL2A1-201ENST00000337299 RAB35Q15286 201 aa11.43□□□□□ -0.58
COL2A1-201ENST00000337299 AGBL5Q8NDL9 886 aa11.43□□□□□ -0.58
COL2A1-201ENST00000337299 TMEM191AQ9H0A3 160 aa11.43□□□□□ -0.58
COL2A1-201ENST00000337299 VSIRQ9H7M9 311 aa11.43□□□□□ -0.58
COL2A1-201ENST00000337299 PPP1R14DQ9NXH3 145 aa11.43□□□□□ -0.58
COL2A1-201ENST00000337299 PSG11Q9UQ72 335 aa11.43□□□□□ -0.58
COL2A1-201ENST00000337299 APCSP02743 223 aa11.43□□□□□ -0.58
COL2A1-201ENST00000337299 SELEP16581 610 aa11.43□□□□□ -0.58
COL2A1-201ENST00000337299 IL3RAP26951 378 aa11.43□□□□□ -0.58
COL2A1-201ENST00000337299 PMELP40967 661 aa11.43□□□□□ -0.58
COL2A1-201ENST00000337299 TAS2R45P59539 299 aa11.43□□□□□ -0.58
COL2A1-201ENST00000337299 ZNF385AQ96PM9 386 aaKnown RBP11.43□□□□□ -0.58
COL2A1-201ENST00000337299 LPAR2Q9HBW0 351 aa11.43□□□□□ -0.58
COL2A1-201ENST00000337299 SNAI2O43623 268 aa11.42□□□□□ -0.58
COL2A1-201ENST00000337299 MPZP25189 248 aa11.42□□□□□ -0.58
COL2A1-201ENST00000337299 RIPPLY3P57055 190 aa11.42□□□□□ -0.58
COL2A1-201ENST00000337299 OR2T6Q8NHC8 308 aa11.42□□□□□ -0.58
COL2A1-201ENST00000337299 KLHDC3Q9BQ90 382 aa11.42□□□□□ -0.58
COL2A1-201ENST00000337299 MENTQ9BUN1 341 aa11.42□□□□□ -0.58
COL2A1-201ENST00000337299 FSCN3Q9NQT6 498 aa11.42□□□□□ -0.58
COL2A1-201ENST00000337299 ZNF835Q9Y2P0 537 aa11.42□□□□□ -0.58
COL2A1-201ENST00000337299 OR2W1Q9Y3N9 320 aa11.42□□□□□ -0.58
COL2A1-201ENST00000337299 A0A1W2PQF6 199 aa11.42□□□□□ -0.58
COL2A1-201ENST00000337299 HELTA6NFD8 242 aa11.42□□□□□ -0.58
COL2A1-201ENST00000337299 SH2D1BO14796 132 aa11.42□□□□□ -0.58
COL2A1-201ENST00000337299 LINC00114Q6XXX2 140 aa11.42□□□□□ -0.58
COL2A1-201ENST00000337299 RPS19BP1Q86WX3 136 aaKnown RBP11.42□□□□□ -0.58
COL2A1-201ENST00000337299 GLRX2Q9NS18 164 aa11.42□□□□□ -0.58
COL2A1-201ENST00000337299 DUSP13Q9UII6 198 aa11.42□□□□□ -0.58
COL2A1-201ENST00000337299 SPTBN1Q01082 2364 aaKnown RBP11.42□□□□□ -0.58
COL2A1-201ENST00000337299 NGFP01138 241 aa11.42□□□□□ -0.58
COL2A1-201ENST00000337299 DEFA4P12838 97 aa11.42□□□□□ -0.58
COL2A1-201ENST00000337299 C1orf194Q5T5A4 169 aa11.42□□□□□ -0.58
COL2A1-201ENST00000337299 RNF2Q99496 336 aa11.42□□□□□ -0.58
COL2A1-201ENST00000337299 HSD17B10Q99714 261 aaKnown RBP11.42□□□□□ -0.58
COL2A1-201ENST00000337299 RLFQ13129 1914 aa11.42□□□□□ -0.58
COL2A1-201ENST00000337299 TRBV24-1A0A075B6N3 115 aa11.41□□□□□ -0.58
COL2A1-201ENST00000337299 C1QTNF9P0C862 333 aa11.41□□□□□ -0.58
COL2A1-201ENST00000337299 RHOBP62745 196 aa11.41□□□□□ -0.58
COL2A1-201ENST00000337299 GATAD1Q8WUU5 269 aa11.41□□□□□ -0.58
COL2A1-201ENST00000337299 APOBEC3DQ96AK3 386 aaPredicted RBP11.41□□□□□ -0.58
COL2A1-201ENST00000337299 Q96M66 194 aa11.41□□□□□ -0.58
COL2A1-201ENST00000337299 WNK2Q9Y3S1 2297 aa11.41□□□□□ -0.58
COL2A1-201ENST00000337299 NUDT3O95989 172 aa11.41□□□□□ -0.58
COL2A1-201ENST00000337299 SMIM10L1P0DMW3 83 aa11.41□□□□□ -0.58
COL2A1-201ENST00000337299 SNAI3Q3KNW1 292 aa11.41□□□□□ -0.58
COL2A1-201ENST00000337299 NHLRC2Q8NBF2 726 aa11.41□□□□□ -0.58
COL2A1-201ENST00000337299 WDYHV1Q96HA8 205 aa11.41□□□□□ -0.58
COL2A1-201ENST00000337299 SMIM10Q96HG1 83 aa11.41□□□□□ -0.58
COL2A1-201ENST00000337299 DOCK7Q96N67 2140 aa11.41□□□□□ -0.58
COL2A1-201ENST00000337299 IFITM10A6NMD0 228 aa11.41□□□□□ -0.58
COL2A1-201ENST00000337299 ZNF891A8MT65 544 aaPredicted RBP11.41□□□□□ -0.58
COL2A1-201ENST00000337299 PPOXP50336 477 aa11.41□□□□□ -0.58
COL2A1-201ENST00000337299 SRSF4Q08170 494 aaKnown RBP11.41□□□□□ -0.58
COL2A1-201ENST00000337299 ASPHD2Q6ICH7 369 aa11.41□□□□□ -0.58
COL2A1-201ENST00000337299 DNAH12Q6ZR08 3092 aa11.41□□□□□ -0.58
COL2A1-201ENST00000337299 FA2HQ7L5A8 372 aa11.41□□□□□ -0.58
COL2A1-201ENST00000337299 CRIPAKQ8N1N5 446 aa11.41□□□□□ -0.58
COL2A1-201ENST00000337299 OR1L3Q8NH93 324 aa11.41□□□□□ -0.58
COL2A1-201ENST00000337299 R3HDM4Q96D70 268 aa11.41□□□□□ -0.58
COL2A1-201ENST00000337299 MVB12AQ96EY5 273 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms