RNA–Protein interactions for RNA: ENST00000335922.9

FGFR1-202, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best) BASIC

Gene FGFR1, Length 4,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-202ENST00000335922 CSPG4Q6UVK1 2322 aa12.56□□□□□ -0.4
FGFR1-202ENST00000335922 FRMPD3Q5JV73 1810 aa12.56□□□□□ -0.4
FGFR1-202ENST00000335922 A0A1W2PPE3 182 aa12.56□□□□□ -0.4
FGFR1-202ENST00000335922 SYNGR1O43759 233 aa12.56□□□□□ -0.4
FGFR1-202ENST00000335922 TOX4O94842 621 aa12.56□□□□□ -0.4
FGFR1-202ENST00000335922 GPR12P47775 334 aa12.56□□□□□ -0.4
FGFR1-202ENST00000335922 C1orf185Q5T7R7 199 aa12.56□□□□□ -0.4
FGFR1-202ENST00000335922 OR2T10Q8NGZ9 312 aa12.56□□□□□ -0.4
FGFR1-202ENST00000335922 ZNF552Q9H707 407 aaPredicted RBP12.56□□□□□ -0.4
FGFR1-202ENST00000335922 CYTL1Q9NRR1 136 aa12.56□□□□□ -0.4
FGFR1-202ENST00000335922 PPIHO43447 177 aaKnown RBP12.55□□□□□ -0.4
FGFR1-202ENST00000335922 OPN1MWP04001 364 aa12.55□□□□□ -0.4
FGFR1-202ENST00000335922 OPN1MW2P0DN77 364 aa12.55□□□□□ -0.4
FGFR1-202ENST00000335922 OPN1MW3P0DN78 364 aa12.55□□□□□ -0.4
FGFR1-202ENST00000335922 CALHM1Q8IU99 346 aa12.55□□□□□ -0.4
FGFR1-202ENST00000335922 OR10A7Q8NGE5 316 aa12.55□□□□□ -0.4
FGFR1-202ENST00000335922 Q96M66 194 aa12.55□□□□□ -0.4
FGFR1-202ENST00000335922 LRRK1Q38SD2 2015 aa12.55□□□□□ -0.4
FGFR1-202ENST00000335922 FCN1O00602 326 aa12.55□□□□□ -0.4
FGFR1-202ENST00000335922 CDIPTO14735 213 aa12.55□□□□□ -0.4
FGFR1-202ENST00000335922 SFTPCP11686 197 aa12.55□□□□□ -0.4
FGFR1-202ENST00000335922 PRF1P14222 555 aa12.55□□□□□ -0.4
FGFR1-202ENST00000335922 AMTP48728 403 aa12.55□□□□□ -0.4
FGFR1-202ENST00000335922 ELOVL1Q9BW60 279 aa12.55□□□□□ -0.4
FGFR1-202ENST00000335922 CHD7Q9P2D1 2997 aa12.55□□□□□ -0.4
FGFR1-202ENST00000335922 DTYMKP23919 212 aa12.55□□□□□ -0.4
FGFR1-202ENST00000335922 GNB2P62879 340 aa12.55□□□□□ -0.4
FGFR1-202ENST00000335922 CCL20P78556 96 aa12.55□□□□□ -0.4
FGFR1-202ENST00000335922 MARS2Q96GW9 593 aaKnown RBP12.55□□□□□ -0.4
FGFR1-202ENST00000335922 MYOZ1Q9NP98 299 aaPredicted RBP12.55□□□□□ -0.4
FGFR1-202ENST00000335922 CARHSP1Q9Y2V2 147 aaKnown RBP12.55□□□□□ -0.4
FGFR1-202ENST00000335922 COL4A3Q01955 1670 aa12.55□□□□□ -0.4
FGFR1-202ENST00000335922 TRDCB7Z8K6 153 aa12.55□□□□□ -0.4
FGFR1-202ENST00000335922 NGFP01138 241 aa12.55□□□□□ -0.4
FGFR1-202ENST00000335922 TNFRSF1AP19438 455 aa12.55□□□□□ -0.4
FGFR1-202ENST00000335922 OR3A1P47881 315 aa12.55□□□□□ -0.4
FGFR1-202ENST00000335922 RBM11P57052 281 aaKnown RBP12.55□□□□□ -0.4
FGFR1-202ENST00000335922 TNFAIP6P98066 277 aaPredicted RBP12.55□□□□□ -0.4
FGFR1-202ENST00000335922 KRTCAP3Q53RY4 240 aa12.55□□□□□ -0.4
FGFR1-202ENST00000335922 NUFIP2Q7Z417 695 aaKnown RBP12.55□□□□□ -0.4
FGFR1-202ENST00000335922 LYZL4Q96KX0 146 aa12.55□□□□□ -0.4
FGFR1-202ENST00000335922 OR2J1Q9GZK6 312 aa12.55□□□□□ -0.4
FGFR1-202ENST00000335922 CXorf65A6NEN9 183 aa12.54□□□□□ -0.4
FGFR1-202ENST00000335922 DNPH1O43598 174 aa12.54□□□□□ -0.4
FGFR1-202ENST00000335922 DPPA3Q6W0C5 159 aa12.54□□□□□ -0.4
FGFR1-202ENST00000335922 OR10G4Q8NGN3 311 aa12.54□□□□□ -0.4
FGFR1-202ENST00000335922 OR10G9Q8NGN4 311 aa12.54□□□□□ -0.4
FGFR1-202ENST00000335922 OR10G7Q8NGN6 311 aa12.54□□□□□ -0.4
FGFR1-202ENST00000335922 M0R143 59 aa12.54□□□□□ -0.4
FGFR1-202ENST00000335922 SYNGR2O43760 224 aa12.54□□□□□ -0.4
FGFR1-202ENST00000335922 TPPP2P59282 170 aa12.54□□□□□ -0.4
FGFR1-202ENST00000335922 UBE2G1P62253 170 aa12.54□□□□□ -0.4
FGFR1-202ENST00000335922 TMEM187Q14656 261 aa12.54□□□□□ -0.4
FGFR1-202ENST00000335922 UBTD1Q9HAC8 227 aa12.54□□□□□ -0.4
FGFR1-202ENST00000335922 GSN-AS1Q9NRJ2 163 aa12.54□□□□□ -0.4
FGFR1-202ENST00000335922 AHRRA9YTQ3 701 aa12.54□□□□□ -0.4
FGFR1-202ENST00000335922 E9PLN8 166 aa12.54□□□□□ -0.4
FGFR1-202ENST00000335922 LDLRAD4O15165 306 aa12.54□□□□□ -0.4
FGFR1-202ENST00000335922 GAPDHP04406 335 aaKnown RBP12.54□□□□□ -0.4
FGFR1-202ENST00000335922 SNRPCP09234 159 aaKnown RBP12.54□□□□□ -0.4
FGFR1-202ENST00000335922 FAM27BQ5VT28 67 aa12.54□□□□□ -0.4
FGFR1-202ENST00000335922 ZNF385CQ66K41 422 aaPredicted RBP12.54□□□□□ -0.4
FGFR1-202ENST00000335922 SLC25A40Q8TBP6 338 aa12.54□□□□□ -0.4
FGFR1-202ENST00000335922 MRGPRDQ8TDS7 321 aa12.54□□□□□ -0.4
FGFR1-202ENST00000335922 IGSF23A1L1A6 192 aa12.53□□□□□ -0.4
FGFR1-202ENST00000335922 DANCRP0C864 163 aa12.53□□□□□ -0.4
FGFR1-202ENST00000335922 PGA5P0DJD9 388 aa12.53□□□□□ -0.4
FGFR1-202ENST00000335922 EGR1P18146 543 aa12.53□□□□□ -0.4
FGFR1-202ENST00000335922 FCER1GP30273 86 aa12.53□□□□□ -0.4
FGFR1-202ENST00000335922 SUCLG1P53597 346 aaKnown RBP12.53□□□□□ -0.4
FGFR1-202ENST00000335922 AARDQ4LEZ3 155 aa12.53□□□□□ -0.4
FGFR1-202ENST00000335922 OR2D2Q9H210 308 aa12.53□□□□□ -0.4
FGFR1-202ENST00000335922 OR51M1Q9H341 326 aa12.53□□□□□ -0.4
FGFR1-202ENST00000335922 CHD8Q9HCK8 2581 aa12.53□□□□□ -0.4
FGFR1-202ENST00000335922 TLN1Q9Y490 2541 aaKnown RBP12.53□□□□□ -0.4
FGFR1-202ENST00000335922 A0A0U1RQV5 110 aa12.53□□□□□ -0.4
FGFR1-202ENST00000335922 A0A1B0GV90 55 aa12.53□□□□□ -0.4
FGFR1-202ENST00000335922 SMIM21Q3B7S5 101 aa12.53□□□□□ -0.4
FGFR1-202ENST00000335922 ZNF818PQ6ZRF7 136 aa12.53□□□□□ -0.4
FGFR1-202ENST00000335922 RAB40CQ96S21 281 aa12.53□□□□□ -0.4
FGFR1-202ENST00000335922 MRPL13Q9BYD1 178 aaKnown RBP12.53□□□□□ -0.4
FGFR1-202ENST00000335922 RALYQ9UKM9 306 aaKnown RBP12.53□□□□□ -0.4
FGFR1-202ENST00000335922 GYPAP02724 150 aa12.53□□□□□ -0.4
FGFR1-202ENST00000335922 IFI6P09912 130 aa12.53□□□□□ -0.4
FGFR1-202ENST00000335922 OR5I1Q13606 314 aa12.53□□□□□ -0.4
FGFR1-202ENST00000335922 LRRC29Q8WV35 223 aa12.53□□□□□ -0.4
FGFR1-202ENST00000335922 RNF166Q96A37 237 aaPredicted RBP12.53□□□□□ -0.4
FGFR1-202ENST00000335922 ZNF703Q9H7S9 590 aaPredicted RBP12.53□□□□□ -0.4
FGFR1-202ENST00000335922 ZNF355PQ9NSJ1 428 aa12.53□□□□□ -0.4
FGFR1-202ENST00000335922 DEPPQ9NTK1 212 aa12.53□□□□□ -0.4
FGFR1-202ENST00000335922 A1L4Q6 167 aa12.52□□□□□ -0.4
FGFR1-202ENST00000335922 FGF16O43320 207 aa12.52□□□□□ -0.4
FGFR1-202ENST00000335922 CEBPDP49716 269 aaPredicted RBP12.52□□□□□ -0.4
FGFR1-202ENST00000335922 ZNF441Q8N8Z8 693 aa12.52□□□□□ -0.4
FGFR1-202ENST00000335922 WFDC1Q9HC57 220 aa12.52□□□□□ -0.4
FGFR1-202ENST00000335922 PRRC2CQ9Y520 2896 aaKnown RBP12.52□□□□□ -0.4
FGFR1-202ENST00000335922 PCNX3Q9H6A9 2034 aa12.52□□□□□ -0.4
FGFR1-202ENST00000335922 A0A1W2PRD5 423 aa12.52□□□□□ -0.41
FGFR1-202ENST00000335922 A0A1W2PRF3 423 aa12.52□□□□□ -0.41
FGFR1-202ENST00000335922 A0A1W2PRM7 423 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms