RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 CTXN2P0C2S0 81 aa14.09□□□□□ -0.15
CDC42EP4-201ENST00000335793 BRS3P32247 399 aa14.09□□□□□ -0.15
CDC42EP4-201ENST00000335793 SLC35E3Q7Z769 313 aa14.09□□□□□ -0.15
CDC42EP4-201ENST00000335793 TVP23CQ96ET8 276 aa14.09□□□□□ -0.15
CDC42EP4-201ENST00000335793 TMEM56Q96MV1 263 aa14.09□□□□□ -0.15
CDC42EP4-201ENST00000335793 SCRT1Q9BWW7 348 aa14.09□□□□□ -0.15
CDC42EP4-201ENST00000335793 PLK3Q9H4B4 646 aa14.09□□□□□ -0.15
CDC42EP4-201ENST00000335793 PLSCR2Q9NRY7 297 aa14.09□□□□□ -0.15
CDC42EP4-201ENST00000335793 KIAA1456Q9P272 454 aa14.09□□□□□ -0.15
CDC42EP4-201ENST00000335793 ATP23Q9Y6H3 246 aa14.09□□□□□ -0.15
CDC42EP4-201ENST00000335793 TMEM56-RWDD3S4R434 201 aa14.09□□□□□ -0.15
CDC42EP4-201ENST00000335793 SPTBN2O15020 2390 aa14.08□□□□□ -0.15
CDC42EP4-201ENST00000335793 LAMTOR5O43504 91 aa14.08□□□□□ -0.16
CDC42EP4-201ENST00000335793 CEACAM21Q3KPI0 293 aa14.08□□□□□ -0.16
CDC42EP4-201ENST00000335793 OR1P1Q8NH06 330 aa14.08□□□□□ -0.16
CDC42EP4-201ENST00000335793 OR4X1Q8NH49 305 aa14.08□□□□□ -0.16
CDC42EP4-201ENST00000335793 IL22RA2Q969J5 263 aa14.08□□□□□ -0.16
CDC42EP4-201ENST00000335793 CABLES2Q9BTV7 478 aa14.08□□□□□ -0.16
CDC42EP4-201ENST00000335793 HMGB3O15347 200 aaKnown RBP14.08□□□□□ -0.16
CDC42EP4-201ENST00000335793 HPRT1P00492 218 aa14.08□□□□□ -0.16
CDC42EP4-201ENST00000335793 HBE1P02100 147 aa14.08□□□□□ -0.16
CDC42EP4-201ENST00000335793 F2RP25116 425 aa14.08□□□□□ -0.16
CDC42EP4-201ENST00000335793 RAB7AP51149 207 aa14.08□□□□□ -0.16
CDC42EP4-201ENST00000335793 OR8G2PQ6IF36 304 aa14.08□□□□□ -0.16
CDC42EP4-201ENST00000335793 C6orf15Q6UXA7 325 aaPredicted RBP14.08□□□□□ -0.16
CDC42EP4-201ENST00000335793 OR10A7Q8NGE5 316 aa14.08□□□□□ -0.16
CDC42EP4-201ENST00000335793 OR1K1Q8NGR3 316 aa14.08□□□□□ -0.16
CDC42EP4-201ENST00000335793 CT55Q8WUE5 264 aa14.08□□□□□ -0.16
CDC42EP4-201ENST00000335793 REPIN1Q9BWE0 567 aaKnown RBP14.08□□□□□ -0.16
CDC42EP4-201ENST00000335793 PRDM14Q9GZV8 571 aa14.08□□□□□ -0.16
CDC42EP4-201ENST00000335793 SH2D2AQ9NP31 389 aa14.08□□□□□ -0.16
CDC42EP4-201ENST00000335793 A0A1B0GUS0 222 aa14.07□□□□□ -0.16
CDC42EP4-201ENST00000335793 MAGEA5P43359 124 aa14.07□□□□□ -0.16
CDC42EP4-201ENST00000335793 GAGE1Q13065 139 aa14.07□□□□□ -0.16
CDC42EP4-201ENST00000335793 LEMD1Q68G75 181 aa14.07□□□□□ -0.16
CDC42EP4-201ENST00000335793 ZNF573Q86YE8 665 aa14.07□□□□□ -0.16
CDC42EP4-201ENST00000335793 GPR146Q96CH1 333 aa14.07□□□□□ -0.16
CDC42EP4-201ENST00000335793 ATP5SQ99766 215 aa14.07□□□□□ -0.16
CDC42EP4-201ENST00000335793 LOXL2Q9Y4K0 774 aa14.07□□□□□ -0.16
CDC42EP4-201ENST00000335793 RIF1Q5UIP0 2472 aaKnown RBP14.07□□□□□ -0.16
CDC42EP4-201ENST00000335793 DOCK11Q5JSL3 2073 aa14.07□□□□□ -0.16
CDC42EP4-201ENST00000335793 TRAV34A0A0B4J273 112 aa14.07□□□□□ -0.16
CDC42EP4-201ENST00000335793 CCL25O15444 150 aa14.07□□□□□ -0.16
CDC42EP4-201ENST00000335793 SRP19P09132 144 aaKnown RBP14.07□□□□□ -0.16
CDC42EP4-201ENST00000335793 CHRNB4P30926 498 aa14.07□□□□□ -0.16
CDC42EP4-201ENST00000335793 ABLIM2Q6H8Q1 611 aa14.07□□□□□ -0.16
CDC42EP4-201ENST00000335793 SPSB3Q6PJ21 355 aa14.07□□□□□ -0.16
CDC42EP4-201ENST00000335793 C20orf204Q6ZNR8 217 aa14.07□□□□□ -0.16
CDC42EP4-201ENST00000335793 TBX15Q96SF7 602 aa14.07□□□□□ -0.16
CDC42EP4-201ENST00000335793 A0A1W2PR80 420 aa14.07□□□□□ -0.16
CDC42EP4-201ENST00000335793 CD55P08174 381 aa14.07□□□□□ -0.16
CDC42EP4-201ENST00000335793 ERVS71-1P61550 626 aa14.07□□□□□ -0.16
CDC42EP4-201ENST00000335793 RPS16P62249 146 aaKnown RBP14.07□□□□□ -0.16
CDC42EP4-201ENST00000335793 IQCJQ1A5X6 159 aa14.07□□□□□ -0.16
CDC42EP4-201ENST00000335793 FAM58AQ8N1B3 248 aa14.07□□□□□ -0.16
CDC42EP4-201ENST00000335793 ACTR3CQ9C0K3 210 aaPredicted RBP14.07□□□□□ -0.16
CDC42EP4-201ENST00000335793 PSENENQ9NZ42 101 aa14.07□□□□□ -0.16
CDC42EP4-201ENST00000335793 RNF150Q9ULK6 438 aa14.07□□□□□ -0.16
CDC42EP4-201ENST00000335793 POLR3KQ9Y2Y1 108 aaPredicted RBP14.07□□□□□ -0.16
CDC42EP4-201ENST00000335793 IGKV1-6A0A0C4DH72 117 aa14.06□□□□□ -0.16
CDC42EP4-201ENST00000335793 CEBPZOSA8MTT3 80 aa14.06□□□□□ -0.16
CDC42EP4-201ENST00000335793 CER1O95813 267 aa14.06□□□□□ -0.16
CDC42EP4-201ENST00000335793 UCP1P25874 307 aa14.06□□□□□ -0.16
CDC42EP4-201ENST00000335793 ID3Q02535 119 aa14.06□□□□□ -0.16
CDC42EP4-201ENST00000335793 ZNF787Q6DD87 383 aa14.06□□□□□ -0.16
CDC42EP4-201ENST00000335793 OR2J1Q9GZK6 312 aa14.06□□□□□ -0.16
CDC42EP4-201ENST00000335793 ZNF665Q9H7R5 613 aa14.06□□□□□ -0.16
CDC42EP4-201ENST00000335793 OR1A1Q9P1Q5 309 aa14.06□□□□□ -0.16
CDC42EP4-201ENST00000335793 OR2W1Q9Y3N9 320 aa14.06□□□□□ -0.16
CDC42EP4-201ENST00000335793 A0A0G2JRQ6 117 aa14.06□□□□□ -0.16
CDC42EP4-201ENST00000335793 SERPINA7P05543 415 aa14.06□□□□□ -0.16
CDC42EP4-201ENST00000335793 HIKESHIQ53FT3 197 aa14.06□□□□□ -0.16
CDC42EP4-201ENST00000335793 FBXW9Q5XUX1 488 aa14.06□□□□□ -0.16
CDC42EP4-201ENST00000335793 FKBP11Q9NYL4 201 aa14.06□□□□□ -0.16
CDC42EP4-201ENST00000335793 A0A1W2PPQ1 181 aa14.05□□□□□ -0.16
CDC42EP4-201ENST00000335793 LILRA1O75019 489 aa14.05□□□□□ -0.16
CDC42EP4-201ENST00000335793 RHBDL1O75783 438 aa14.05□□□□□ -0.16
CDC42EP4-201ENST00000335793 BAXQ07812 192 aa14.05□□□□□ -0.16
CDC42EP4-201ENST00000335793 IL24Q13007 206 aa14.05□□□□□ -0.16
CDC42EP4-201ENST00000335793 TOMM20LQ6UXN7 152 aa14.05□□□□□ -0.16
CDC42EP4-201ENST00000335793 LAMP3Q9UQV4 416 aa14.05□□□□□ -0.16
CDC42EP4-201ENST00000335793 TAS2R30P59541 319 aa14.05□□□□□ -0.16
CDC42EP4-201ENST00000335793 SIGLEC12Q96PQ1 595 aa14.05□□□□□ -0.16
CDC42EP4-201ENST00000335793 ZNF320A2RRD8 509 aa14.05□□□□□ -0.16
CDC42EP4-201ENST00000335793 A8MXE2 369 aa14.05□□□□□ -0.16
CDC42EP4-201ENST00000335793 NAPSAO96009 420 aa14.05□□□□□ -0.16
CDC42EP4-201ENST00000335793 ZFP36L1Q07352 338 aaKnown RBP14.05□□□□□ -0.16
CDC42EP4-201ENST00000335793 ICAM4Q14773 271 aa14.05□□□□□ -0.16
CDC42EP4-201ENST00000335793 TESK1Q15569 626 aa14.05□□□□□ -0.16
CDC42EP4-201ENST00000335793 NMSQ5H8A3 153 aa14.05□□□□□ -0.16
CDC42EP4-201ENST00000335793 RBMXL1Q96E39 390 aaKnown RBP14.05□□□□□ -0.16
CDC42EP4-201ENST00000335793 FGF23Q9GZV9 251 aaPredicted RBP14.05□□□□□ -0.16
CDC42EP4-201ENST00000335793 RPRMQ9NS64 109 aa14.05□□□□□ -0.16
CDC42EP4-201ENST00000335793 CLDN1O95832 211 aa14.04□□□□□ -0.16
CDC42EP4-201ENST00000335793 UCP2P55851 309 aa14.04□□□□□ -0.16
CDC42EP4-201ENST00000335793 GNG3P63215 75 aa14.04□□□□□ -0.16
CDC42EP4-201ENST00000335793 OR10V1Q8NGI7 309 aa14.04□□□□□ -0.16
CDC42EP4-201ENST00000335793 OR5A2Q8NGI9 324 aa14.04□□□□□ -0.16
CDC42EP4-201ENST00000335793 ABI3Q9P2A4 366 aa14.04□□□□□ -0.16
CDC42EP4-201ENST00000335793 ICE1Q9Y2F5 2266 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms