RNA–Protein interactions for RNA: ENST00000335725.8

TDP1-201, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 3,702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-201ENST00000335725 RPRMQ9NS64 109 aa7.36□□□□□ -1.23
TDP1-201ENST00000335725 C20orf141Q9NUB4 165 aa7.36□□□□□ -1.23
TDP1-201ENST00000335725 SLC39A9Q9NUM3 307 aa7.36□□□□□ -1.23
TDP1-201ENST00000335725 C1RLQ9NZP8 487 aa7.36□□□□□ -1.23
TDP1-201ENST00000335725 ERRFI1Q9UJM3 462 aaPredicted RBP7.36□□□□□ -1.23
TDP1-201ENST00000335725 TRBV5-4A0A0C4DH59 114 aa7.36□□□□□ -1.23
TDP1-201ENST00000335725 OR4C46A6NHA9 309 aa7.36□□□□□ -1.23
TDP1-201ENST00000335725 F8WDY8 70 aa7.36□□□□□ -1.23
TDP1-201ENST00000335725 ADAM20O43506 726 aa7.36□□□□□ -1.23
TDP1-201ENST00000335725 HSBP1O75506 76 aa7.36□□□□□ -1.23
TDP1-201ENST00000335725 TMEM50AO95807 157 aa7.36□□□□□ -1.23
TDP1-201ENST00000335725 IGHG4P01861 327 aa7.36□□□□□ -1.23
TDP1-201ENST00000335725 CFIP05156 583 aa7.36□□□□□ -1.23
TDP1-201ENST00000335725 CT45A10P0DMU9 189 aa7.36□□□□□ -1.23
TDP1-201ENST00000335725 PLP2Q04941 152 aa7.36□□□□□ -1.23
TDP1-201ENST00000335725 SHISA6Q6ZSJ9 500 aa7.36□□□□□ -1.23
TDP1-201ENST00000335725 HAPLN4Q86UW8 402 aa7.36□□□□□ -1.23
TDP1-201ENST00000335725 LRRC75AQ8NAA5 344 aa7.36□□□□□ -1.23
TDP1-201ENST00000335725 LMX1AQ8TE12 382 aa7.36□□□□□ -1.23
TDP1-201ENST00000335725 LSM10Q969L4 123 aaKnown RBP7.36□□□□□ -1.23
TDP1-201ENST00000335725 SPAG8Q99932 426 aaPredicted RBP7.36□□□□□ -1.23
TDP1-201ENST00000335725 GP6Q9HCN6 339 aa7.36□□□□□ -1.23
TDP1-201ENST00000335725 MBNL3Q9NUK0 354 aaKnown RBP7.36□□□□□ -1.23
TDP1-201ENST00000335725 NECAP2Q9NVZ3 263 aa7.36□□□□□ -1.23
TDP1-201ENST00000335725 TMPRSS2O15393 492 aa7.36□□□□□ -1.23
TDP1-201ENST00000335725 DRD3P35462 400 aa7.36□□□□□ -1.23
TDP1-201ENST00000335725 NKX2-1P43699 371 aaPredicted RBP7.36□□□□□ -1.23
TDP1-201ENST00000335725 LINC00696Q6ZRV3 163 aa7.36□□□□□ -1.23
TDP1-201ENST00000335725 GATSQ8NAP1 163 aa7.36□□□□□ -1.23
TDP1-201ENST00000335725 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.36□□□□□ -1.23
TDP1-201ENST00000335725 DAZLQ92904 295 aaKnown RBP7.36□□□□□ -1.23
TDP1-201ENST00000335725 ST6GALNAC6Q969X2 333 aa7.36□□□□□ -1.23
TDP1-201ENST00000335725 ZC2HC1AQ96GY0 325 aa7.36□□□□□ -1.23
TDP1-201ENST00000335725 SLC25A44Q96H78 314 aaPredicted RBP7.36□□□□□ -1.23
TDP1-201ENST00000335725 TNFRSF13CQ96RJ3 184 aa7.36□□□□□ -1.23
TDP1-201ENST00000335725 TMEM70Q9BUB7 260 aa7.36□□□□□ -1.23
TDP1-201ENST00000335725 ULBP3Q9BZM4 244 aa7.36□□□□□ -1.23
TDP1-201ENST00000335725 UBTD1Q9HAC8 227 aa7.36□□□□□ -1.23
TDP1-201ENST00000335725 SIGLEC8Q9NYZ4 499 aa7.36□□□□□ -1.23
TDP1-201ENST00000335725 B4GALT7Q9UBV7 327 aa7.36□□□□□ -1.23
TDP1-201ENST00000335725 F2Z2F3 143 aa7.35□□□□□ -1.23
TDP1-201ENST00000335725 NRG2O14511 850 aaPredicted RBP7.35□□□□□ -1.23
TDP1-201ENST00000335725 PAX9P55771 341 aa7.35□□□□□ -1.23
TDP1-201ENST00000335725 FUT7Q11130 342 aa7.35□□□□□ -1.23
TDP1-201ENST00000335725 ARFRP1Q13795 201 aa7.35□□□□□ -1.23
TDP1-201ENST00000335725 DCAF12Q5T6F0 453 aa7.35□□□□□ -1.23
TDP1-201ENST00000335725 FAM162BQ5T6X4 162 aa7.35□□□□□ -1.23
TDP1-201ENST00000335725 SPATA12Q7Z6I5 190 aa7.35□□□□□ -1.23
TDP1-201ENST00000335725 TMEM251Q8N6I4 163 aa7.35□□□□□ -1.23
TDP1-201ENST00000335725 ONECUT1Q9UBC0 465 aa7.35□□□□□ -1.23
TDP1-201ENST00000335725 CASP8AP2Q9UKL3 1982 aa7.35□□□□□ -1.23
TDP1-201ENST00000335725 FAM181BA6NEQ2 426 aa7.35□□□□□ -1.23
TDP1-201ENST00000335725 HIST1H1TP22492 207 aaPredicted RBP7.35□□□□□ -1.23
TDP1-201ENST00000335725 ABCA11PQ4W5N1 156 aa7.35□□□□□ -1.23
TDP1-201ENST00000335725 TSKUQ8WUA8 353 aa7.35□□□□□ -1.23
TDP1-201ENST00000335725 TMEM171Q8WVE6 324 aa7.35□□□□□ -1.23
TDP1-201ENST00000335725 MSI2Q96DH6 328 aaKnown RBP7.35□□□□□ -1.23
TDP1-201ENST00000335725 TAS2R4Q9NYW5 299 aa7.35□□□□□ -1.23
TDP1-201ENST00000335725 A0A087X0K7 114 aa7.35□□□□□ -1.23
TDP1-201ENST00000335725 SHISA7A6NL88 538 aa7.35□□□□□ -1.23
TDP1-201ENST00000335725 NPIPB5A8MRT5 1133 aa7.35□□□□□ -1.23
TDP1-201ENST00000335725 IGFBP3P17936 291 aaPredicted RBP7.35□□□□□ -1.23
TDP1-201ENST00000335725 OR8B8Q15620 311 aa7.35□□□□□ -1.23
TDP1-201ENST00000335725 IER5LQ5T953 404 aa7.35□□□□□ -1.23
TDP1-201ENST00000335725 SPRYD7Q5W111 196 aa7.35□□□□□ -1.23
TDP1-201ENST00000335725 ABHD17CQ6PCB6 329 aa7.35□□□□□ -1.23
TDP1-201ENST00000335725 CA13Q8N1Q1 262 aa7.35□□□□□ -1.23
TDP1-201ENST00000335725 C1orf162Q8NEQ5 155 aaPredicted RBP7.35□□□□□ -1.23
TDP1-201ENST00000335725 OR10G8Q8NGN5 311 aa7.35□□□□□ -1.23
TDP1-201ENST00000335725 VGLL1Q99990 258 aa7.35□□□□□ -1.23
TDP1-201ENST00000335725 SFXN3Q9BWM7 321 aa7.35□□□□□ -1.23
TDP1-201ENST00000335725 PPDPFQ9H3Y8 114 aa7.35□□□□□ -1.23
TDP1-201ENST00000335725 ANXA10Q9UJ72 324 aa7.35□□□□□ -1.23
TDP1-201ENST00000335725 COL18A1P39060 1754 aa7.34□□□□□ -1.23
TDP1-201ENST00000335725 SMIM9A6NGZ8 99 aa7.34□□□□□ -1.23
TDP1-201ENST00000335725 H3BSH0 61 aa7.34□□□□□ -1.23
TDP1-201ENST00000335725 RER1O15258 196 aa7.34□□□□□ -1.23
TDP1-201ENST00000335725 AGFG2O95081 481 aa7.34□□□□□ -1.23
TDP1-201ENST00000335725 IER3P46695 156 aa7.34□□□□□ -1.23
TDP1-201ENST00000335725 TESK1Q15569 626 aa7.34□□□□□ -1.23
TDP1-201ENST00000335725 WIPI1Q5MNZ9 446 aaPredicted RBP7.34□□□□□ -1.23
TDP1-201ENST00000335725 ARTNQ5T4W7 220 aa7.34□□□□□ -1.23
TDP1-201ENST00000335725 ZNF611Q8N823 705 aa7.34□□□□□ -1.23
TDP1-201ENST00000335725 NEU4Q8WWR8 484 aaPredicted RBP7.34□□□□□ -1.23
TDP1-201ENST00000335725 SCRT2Q9NQ03 307 aa7.34□□□□□ -1.23
TDP1-201ENST00000335725 IL36BQ9NZH7 164 aa7.34□□□□□ -1.23
TDP1-201ENST00000335725 IGLV3-10A0A075B6K4 115 aa7.34□□□□□ -1.23
TDP1-201ENST00000335725 CXCL9Q07325 125 aa7.34□□□□□ -1.23
TDP1-201ENST00000335725 KIR3DS1Q14943 382 aa7.34□□□□□ -1.23
TDP1-201ENST00000335725 PDCD1Q15116 288 aa7.34□□□□□ -1.23
TDP1-201ENST00000335725 OR1Q1Q15612 314 aa7.34□□□□□ -1.23
TDP1-201ENST00000335725 WDR38Q5JTN6 314 aa7.34□□□□□ -1.23
TDP1-201ENST00000335725 SAMD5Q5TGI4 173 aa7.34□□□□□ -1.23
TDP1-201ENST00000335725 ASCL4Q6XD76 172 aa7.34□□□□□ -1.23
TDP1-201ENST00000335725 NAA60Q9H7X0 242 aa7.34□□□□□ -1.23
TDP1-201ENST00000335725 PDFQ9HBH1 243 aa7.34□□□□□ -1.23
TDP1-201ENST00000335725 A0A087WV48 116 aa7.34□□□□□ -1.24
TDP1-201ENST00000335725 HMGB3O15347 200 aaKnown RBP7.34□□□□□ -1.24
TDP1-201ENST00000335725 DUX1O43812 170 aa7.34□□□□□ -1.24
TDP1-201ENST00000335725 HMGN2P05204 90 aaKnown RBP7.34□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms