RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 RNASEK-C17orf49H0YIS7 233 aa13.48□□□□□ -0.25
SHOX-201ENST00000334060 ENSAO43768 121 aaKnown RBP13.48□□□□□ -0.25
SHOX-201ENST00000334060 ZNF735P0CB33 412 aa13.48□□□□□ -0.25
SHOX-201ENST00000334060 IGKV1-13P0DP09 117 aa13.48□□□□□ -0.25
SHOX-201ENST00000334060 LINC00205P59089 165 aa13.48□□□□□ -0.25
SHOX-201ENST00000334060 DIAPH2-AS1Q14236 149 aa13.48□□□□□ -0.25
SHOX-201ENST00000334060 RUSC1-AS1Q66K80 236 aa13.48□□□□□ -0.25
SHOX-201ENST00000334060 HSD17B13Q7Z5P4 300 aaPredicted RBP13.48□□□□□ -0.25
SHOX-201ENST00000334060 OR2S2Q9NQN1 319 aa13.48□□□□□ -0.25
SHOX-201ENST00000334060 UBE2J1Q9Y385 318 aaPredicted RBP13.48□□□□□ -0.25
SHOX-201ENST00000334060 ZNF729A6NN14 1252 aaPredicted RBP13.47□□□□□ -0.25
SHOX-201ENST00000334060 SULT1C2O00338 296 aa13.47□□□□□ -0.25
SHOX-201ENST00000334060 IGHV4-38-2P0DP08 117 aa13.47□□□□□ -0.25
SHOX-201ENST00000334060 PAX8Q06710 450 aa13.47□□□□□ -0.25
SHOX-201ENST00000334060 ARL6IP1Q15041 203 aa13.47□□□□□ -0.25
SHOX-201ENST00000334060 LGALSLQ3ZCW2 172 aaPredicted RBP13.47□□□□□ -0.25
SHOX-201ENST00000334060 DCAF12L2Q5VW00 463 aa13.47□□□□□ -0.25
SHOX-201ENST00000334060 OR5AP2Q8NGF4 316 aa13.47□□□□□ -0.25
SHOX-201ENST00000334060 C5orf30Q96GV9 206 aa13.47□□□□□ -0.25
SHOX-201ENST00000334060 RIMS4Q9H426 269 aaPredicted RBP13.47□□□□□ -0.25
SHOX-201ENST00000334060 IDI2-AS1Q9NZ38 188 aa13.47□□□□□ -0.25
SHOX-201ENST00000334060 EHFQ9NZC4 300 aa13.47□□□□□ -0.25
SHOX-201ENST00000334060 MTORP42345 2549 aa13.47□□□□□ -0.25
SHOX-201ENST00000334060 SMLR1H3BR10 107 aa13.47□□□□□ -0.25
SHOX-201ENST00000334060 F2RL2O00254 374 aa13.47□□□□□ -0.25
SHOX-201ENST00000334060 GPR37O15354 613 aa13.47□□□□□ -0.25
SHOX-201ENST00000334060 ST8SIA5O15466 376 aa13.47□□□□□ -0.25
SHOX-201ENST00000334060 HOXB4P17483 251 aaPredicted RBP13.47□□□□□ -0.25
SHOX-201ENST00000334060 BTCP35070 178 aa13.47□□□□□ -0.25
SHOX-201ENST00000334060 HOXA1P49639 335 aaPredicted RBP13.47□□□□□ -0.25
SHOX-201ENST00000334060 DYRK1AQ13627 763 aa13.47□□□□□ -0.25
SHOX-201ENST00000334060 KLF17Q5JT82 389 aaPredicted RBP13.47□□□□□ -0.25
SHOX-201ENST00000334060 HEPN1Q6WQI6 88 aa13.47□□□□□ -0.25
SHOX-201ENST00000334060 OR11H7Q8NGC8 314 aa13.47□□□□□ -0.25
SHOX-201ENST00000334060 CABLES2Q9BTV7 478 aa13.47□□□□□ -0.25
SHOX-201ENST00000334060 SDHAF2Q9NX18 166 aa13.47□□□□□ -0.25
SHOX-201ENST00000334060 RNF150Q9ULK6 438 aa13.47□□□□□ -0.25
SHOX-201ENST00000334060 PSG11Q9UQ72 335 aa13.47□□□□□ -0.25
SHOX-201ENST00000334060 ZNF736B4DX44 427 aaPredicted RBP13.46□□□□□ -0.25
SHOX-201ENST00000334060 PEX14O75381 377 aa13.46□□□□□ -0.25
SHOX-201ENST00000334060 ECDO95905 644 aaPredicted RBP13.46□□□□□ -0.25
SHOX-201ENST00000334060 TCRBP04435 133 aa13.46□□□□□ -0.25
SHOX-201ENST00000334060 CEACAM6P40199 344 aa13.46□□□□□ -0.25
SHOX-201ENST00000334060 CHRFAM7AQ494W8 412 aa13.46□□□□□ -0.25
SHOX-201ENST00000334060 ZNF660Q6AZW8 331 aaPredicted RBP13.46□□□□□ -0.25
SHOX-201ENST00000334060 STEAP1BQ6NZ63 245 aa13.46□□□□□ -0.25
SHOX-201ENST00000334060 Q6ZS49 121 aa13.46□□□□□ -0.25
SHOX-201ENST00000334060 LHX4Q969G2 390 aa13.46□□□□□ -0.25
SHOX-201ENST00000334060 NCOR1P1Q9H4R4 102 aa13.46□□□□□ -0.25
SHOX-201ENST00000334060 C7orf69Q9H7B7 122 aa13.46□□□□□ -0.25
SHOX-201ENST00000334060 LINC00574Q9H8X3 128 aa13.46□□□□□ -0.25
SHOX-201ENST00000334060 HRASLSQ9HDD0 168 aa13.46□□□□□ -0.25
SHOX-201ENST00000334060 TAS2R3Q9NYW6 316 aa13.46□□□□□ -0.25
SHOX-201ENST00000334060 KCNIP1Q9NZI2 227 aa13.46□□□□□ -0.25
SHOX-201ENST00000334060 TRBV6-7A0A0A0MS04 114 aa13.45□□□□□ -0.26
SHOX-201ENST00000334060 H3BUI4 141 aa13.45□□□□□ -0.26
SHOX-201ENST00000334060 B3GALNT1O75752 331 aa13.45□□□□□ -0.26
SHOX-201ENST00000334060 TOX4O94842 621 aa13.45□□□□□ -0.26
SHOX-201ENST00000334060 HEXAP06865 529 aa13.45□□□□□ -0.26
SHOX-201ENST00000334060 OR5H8P0DN80 308 aa13.45□□□□□ -0.26
SHOX-201ENST00000334060 GZMHP20718 246 aa13.45□□□□□ -0.26
SHOX-201ENST00000334060 AADACP22760 399 aa13.45□□□□□ -0.26
SHOX-201ENST00000334060 FPR2P25090 351 aa13.45□□□□□ -0.26
SHOX-201ENST00000334060 CCR6P51684 374 aa13.45□□□□□ -0.26
SHOX-201ENST00000334060 BRD3OSQ6XYD6 125 aa13.45□□□□□ -0.26
SHOX-201ENST00000334060 MOB1BQ7L9L4 216 aa13.45□□□□□ -0.26
SHOX-201ENST00000334060 LHFPL4Q7Z7J7 247 aa13.45□□□□□ -0.26
SHOX-201ENST00000334060 TOMM5Q8N4H5 51 aa13.45□□□□□ -0.26
SHOX-201ENST00000334060 ASB13Q8WXK3 278 aa13.45□□□□□ -0.26
SHOX-201ENST00000334060 C22orf15Q8WYQ4 148 aa13.45□□□□□ -0.26
SHOX-201ENST00000334060 GALMQ96C23 342 aa13.45□□□□□ -0.26
SHOX-201ENST00000334060 GFOD1Q9NXC2 390 aa13.45□□□□□ -0.26
SHOX-201ENST00000334060 GNG12Q9UBI6 72 aa13.45□□□□□ -0.26
SHOX-201ENST00000334060 TRAV40A0A0B4J280 105 aa13.45□□□□□ -0.26
SHOX-201ENST00000334060 NAP1L6A6NFF2 107 aa13.45□□□□□ -0.26
SHOX-201ENST00000334060 SPINT2O43291 252 aa13.45□□□□□ -0.26
SHOX-201ENST00000334060 CD74P04233 296 aa13.45□□□□□ -0.26
SHOX-201ENST00000334060 FCGR2CP31995 323 aa13.45□□□□□ -0.26
SHOX-201ENST00000334060 MRPS10P82664 201 aaKnown RBP13.45□□□□□ -0.26
SHOX-201ENST00000334060 BTN1A1Q13410 526 aa13.45□□□□□ -0.26
SHOX-201ENST00000334060 MORN2Q502X0 79 aa13.45□□□□□ -0.26
SHOX-201ENST00000334060 CT45A1Q5HYN5 189 aa13.45□□□□□ -0.26
SHOX-201ENST00000334060 ZNF439Q8NDP4 499 aa13.45□□□□□ -0.26
SHOX-201ENST00000334060 OR4A4PQ8NGN8 299 aa13.45□□□□□ -0.26
SHOX-201ENST00000334060 OR5H2Q8NGV7 314 aa13.45□□□□□ -0.26
SHOX-201ENST00000334060 CT45A3Q8NHU0 189 aa13.45□□□□□ -0.26
SHOX-201ENST00000334060 ABHD14BQ96IU4 210 aa13.45□□□□□ -0.26
SHOX-201ENST00000334060 C18orf12Q96KH6 178 aa13.45□□□□□ -0.26
SHOX-201ENST00000334060 GAL3ST2Q9H3Q3 398 aa13.45□□□□□ -0.26
SHOX-201ENST00000334060 IGHV2-26A0A0B4J1V2 119 aa13.44□□□□□ -0.26
SHOX-201ENST00000334060 OR5H14A6NHG9 310 aa13.44□□□□□ -0.26
SHOX-201ENST00000334060 MPTX1A8MV57 137 aa13.44□□□□□ -0.26
SHOX-201ENST00000334060 RAB3DO95716 219 aa13.44□□□□□ -0.26
SHOX-201ENST00000334060 LY6G6DO95868 133 aa13.44□□□□□ -0.26
SHOX-201ENST00000334060 H2AFB2P0C5Z0 115 aa13.44□□□□□ -0.26
SHOX-201ENST00000334060 FXYD4P59646 89 aa13.44□□□□□ -0.26
SHOX-201ENST00000334060 ACTBP60709 375 aa13.44□□□□□ -0.26
SHOX-201ENST00000334060 ACTG1P63261 375 aa13.44□□□□□ -0.26
SHOX-201ENST00000334060 FBLN7Q53RD9 439 aa13.44□□□□□ -0.26
SHOX-201ENST00000334060 BTNL3Q6UXE8 466 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms