RNA–Protein interactions for RNA: ENST00000333896.5

SPTBN1-201, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTBN1, Length 9,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-201ENST00000333896 HIST1H2BOP23527 126 aa9.11□□□□□ -0.95
SPTBN1-201ENST00000333896 HIST1H2BBP33778 126 aa9.11□□□□□ -0.95
SPTBN1-201ENST00000333896 LPAR6P43657 344 aa9.11□□□□□ -0.95
SPTBN1-201ENST00000333896 HIST1H2BDP58876 126 aa9.11□□□□□ -0.95
SPTBN1-201ENST00000333896 HIST1H2BCP62807 126 aa9.11□□□□□ -0.95
SPTBN1-201ENST00000333896 HIST2H2BEQ16778 126 aa9.11□□□□□ -0.95
SPTBN1-201ENST00000333896 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.11□□□□□ -0.95
SPTBN1-201ENST00000333896 DYNLRB2Q8TF09 96 aa9.11□□□□□ -0.95
SPTBN1-201ENST00000333896 HIST1H2BHQ93079 126 aa9.11□□□□□ -0.95
SPTBN1-201ENST00000333896 MRPL24Q96A35 216 aaKnown RBP9.11□□□□□ -0.95
SPTBN1-201ENST00000333896 HIST1H2BNQ99877 126 aa9.11□□□□□ -0.95
SPTBN1-201ENST00000333896 HIST1H2BMQ99879 126 aa9.11□□□□□ -0.95
SPTBN1-201ENST00000333896 C19orf53Q9UNZ5 99 aaPredicted RBP9.11□□□□□ -0.95
SPTBN1-201ENST00000333896 LCTP09848 1927 aa9.11□□□□□ -0.95
SPTBN1-201ENST00000333896 KCPQ6ZWJ8 1503 aa9.11□□□□□ -0.95
SPTBN1-201ENST00000333896 CD38P28907 300 aa9.11□□□□□ -0.95
SPTBN1-201ENST00000333896 TNFRSF4P43489 277 aa9.11□□□□□ -0.95
SPTBN1-201ENST00000333896 HIST1H1AQ02539 215 aaPredicted RBP9.11□□□□□ -0.95
SPTBN1-201ENST00000333896 LINC01559Q495D7 138 aa9.11□□□□□ -0.95
SPTBN1-201ENST00000333896 OTPQ5XKR4 325 aa9.11□□□□□ -0.95
SPTBN1-201ENST00000333896 LINC00596Q86U02 117 aa9.11□□□□□ -0.95
SPTBN1-201ENST00000333896 IGKV3D-11A0A0A0MRZ8 115 aa9.11□□□□□ -0.95
SPTBN1-201ENST00000333896 PRRG2O14669 202 aa9.11□□□□□ -0.95
SPTBN1-201ENST00000333896 IGKV3-11P04433 115 aa9.11□□□□□ -0.95
SPTBN1-201ENST00000333896 CKS2P33552 79 aa9.11□□□□□ -0.95
SPTBN1-201ENST00000333896 MAS1LP35410 378 aa9.11□□□□□ -0.95
SPTBN1-201ENST00000333896 B4GALNT1Q00973 533 aa9.11□□□□□ -0.95
SPTBN1-201ENST00000333896 C1orf194Q5T5A4 169 aa9.11□□□□□ -0.95
SPTBN1-201ENST00000333896 RABAC1Q9UI14 185 aa9.11□□□□□ -0.95
SPTBN1-201ENST00000333896 PROCRQ9UNN8 238 aa9.11□□□□□ -0.95
SPTBN1-201ENST00000333896 BRCA1P38398 1863 aaKnown RBP9.11□□□□□ -0.95
SPTBN1-201ENST00000333896 NDUFB3O43676 98 aa9.11□□□□□ -0.95
SPTBN1-201ENST00000333896 TNFSF13O75888 250 aa9.11□□□□□ -0.95
SPTBN1-201ENST00000333896 FCGR2BP31994 310 aaPredicted RBP9.11□□□□□ -0.95
SPTBN1-201ENST00000333896 MFAP2P55001 183 aa9.11□□□□□ -0.95
SPTBN1-201ENST00000333896 GAGE2BQ13066 116 aa9.11□□□□□ -0.95
SPTBN1-201ENST00000333896 GAGE2EQ4V326 116 aa9.11□□□□□ -0.95
SPTBN1-201ENST00000333896 SMOC1Q9H4F8 434 aa9.11□□□□□ -0.95
SPTBN1-201ENST00000333896 GAGE2DQ9UEU5 116 aa9.11□□□□□ -0.95
SPTBN1-201ENST00000333896 RLFQ13129 1914 aa9.11□□□□□ -0.95
SPTBN1-201ENST00000333896 IGKV3D-15A0A087WSY6 115 aa9.11□□□□□ -0.95
SPTBN1-201ENST00000333896 ASPDHA6ND91 283 aa9.11□□□□□ -0.95
SPTBN1-201ENST00000333896 IGKV3-15P01624 115 aa9.11□□□□□ -0.95
SPTBN1-201ENST00000333896 APELAP0DMC3 54 aa9.11□□□□□ -0.95
SPTBN1-201ENST00000333896 MRGPRX1Q96LB2 322 aa9.11□□□□□ -0.95
SPTBN1-201ENST00000333896 HDHD3Q9BSH5 251 aaPredicted RBP9.11□□□□□ -0.95
SPTBN1-201ENST00000333896 GLRX2Q9NS18 164 aa9.11□□□□□ -0.95
SPTBN1-201ENST00000333896 SLCO1C1Q9NYB5 712 aa9.11□□□□□ -0.95
SPTBN1-201ENST00000333896 ATP6V0CP27449 155 aa9.11□□□□□ -0.95
SPTBN1-201ENST00000333896 Q8WTZ3 238 aa9.11□□□□□ -0.95
SPTBN1-201ENST00000333896 RASL11BQ9BPW5 248 aa9.11□□□□□ -0.95
SPTBN1-201ENST00000333896 SIRT5Q9NXA8 310 aa9.11□□□□□ -0.95
SPTBN1-201ENST00000333896 ERRFI1Q9UJM3 462 aaPredicted RBP9.11□□□□□ -0.95
SPTBN1-201ENST00000333896 SBK3P0C264 359 aa9.11□□□□□ -0.95
SPTBN1-201ENST00000333896 NRSN2Q9GZP1 204 aa9.11□□□□□ -0.95
SPTBN1-201ENST00000333896 CTSVO60911 334 aa9.1□□□□□ -0.95
SPTBN1-201ENST00000333896 KBTBD11O94819 623 aa9.1□□□□□ -0.95
SPTBN1-201ENST00000333896 RPL18Q07020 188 aaKnown RBP9.1□□□□□ -0.95
SPTBN1-201ENST00000333896 LSM10Q969L4 123 aaKnown RBP9.1□□□□□ -0.95
SPTBN1-201ENST00000333896 AMMECR1Q9Y4X0 333 aaPredicted RBP9.1□□□□□ -0.95
SPTBN1-201ENST00000333896 FAM181BA6NEQ2 426 aa9.1□□□□□ -0.95
SPTBN1-201ENST00000333896 IGHV3-13P01766 116 aa9.1□□□□□ -0.95
SPTBN1-201ENST00000333896 IGHV3-7P01780 117 aa9.1□□□□□ -0.95
SPTBN1-201ENST00000333896 WNT5AP41221 380 aa9.1□□□□□ -0.95
SPTBN1-201ENST00000333896 SIGLEC7Q9Y286 467 aa9.1□□□□□ -0.95
SPTBN1-201ENST00000333896 M0QZQ0 153 aa9.1□□□□□ -0.95
SPTBN1-201ENST00000333896 RPS11P62280 158 aaKnown RBP eCLIP9.1□□□□□ -0.95
SPTBN1-201ENST00000333896 SSMEM1Q8WWF3 244 aa9.1□□□□□ -0.95
SPTBN1-201ENST00000333896 IGHV1-69-2A0A0G2JMI3 117 aa9.1□□□□□ -0.95
SPTBN1-201ENST00000333896 FAM157AC9JC47 383 aa9.1□□□□□ -0.95
SPTBN1-201ENST00000333896 GFYI3L273 518 aa9.1□□□□□ -0.95
SPTBN1-201ENST00000333896 LANCL1O43813 399 aa9.1□□□□□ -0.95
SPTBN1-201ENST00000333896 WFDC3Q8IUB2 231 aa9.1□□□□□ -0.95
SPTBN1-201ENST00000333896 TMEM106BQ9NUM4 274 aa9.1□□□□□ -0.95
SPTBN1-201ENST00000333896 GHRHP01286 108 aa9.1□□□□□ -0.95
SPTBN1-201ENST00000333896 SLC16A11Q8NCK7 471 aa9.1□□□□□ -0.95
SPTBN1-201ENST00000333896 C14orf144Q96I85 54 aa9.1□□□□□ -0.95
SPTBN1-201ENST00000333896 SONP18583 2426 aaKnown RBP9.1□□□□□ -0.95
SPTBN1-201ENST00000333896 IGKV3OR2-268A0A0C4DH90 116 aa9.1□□□□□ -0.95
SPTBN1-201ENST00000333896 H0Y980 276 aa9.1□□□□□ -0.95
SPTBN1-201ENST00000333896 PDCD1Q15116 288 aa9.1□□□□□ -0.95
SPTBN1-201ENST00000333896 ANKRD34AQ69YU3 496 aa9.1□□□□□ -0.95
SPTBN1-201ENST00000333896 LRP10Q7Z4F1 713 aa9.1□□□□□ -0.95
SPTBN1-201ENST00000333896 ATOH7Q8N100 152 aa9.1□□□□□ -0.95
SPTBN1-201ENST00000333896 NUDT8Q8WV74 236 aa9.1□□□□□ -0.95
SPTBN1-201ENST00000333896 RAB1BQ9H0U4 201 aa9.1□□□□□ -0.95
SPTBN1-201ENST00000333896 PRDM13Q9H4Q3 707 aa9.1□□□□□ -0.95
SPTBN1-201ENST00000333896 LRP12Q9Y561 859 aa9.1□□□□□ -0.95
SPTBN1-201ENST00000333896 UPK1AO00322 258 aa9.1□□□□□ -0.95
SPTBN1-201ENST00000333896 HYAL3O43820 417 aaPredicted RBP9.1□□□□□ -0.95
SPTBN1-201ENST00000333896 OR4A8P0C604 315 aa9.1□□□□□ -0.95
SPTBN1-201ENST00000333896 CDAP32320 146 aa9.1□□□□□ -0.95
SPTBN1-201ENST00000333896 HEPN1Q6WQI6 88 aa9.1□□□□□ -0.95
SPTBN1-201ENST00000333896 OR11H4Q8NGC9 324 aa9.1□□□□□ -0.95
SPTBN1-201ENST00000333896 RNASEH2CQ8TDP1 164 aaKnown RBP9.1□□□□□ -0.95
SPTBN1-201ENST00000333896 A0A1W2PNR3 127 aa9.09□□□□□ -0.95
SPTBN1-201ENST00000333896 GAGE12BA1L429 117 aa9.09□□□□□ -0.95
SPTBN1-201ENST00000333896 C10orf113Q5VZT2 155 aa9.09□□□□□ -0.95
SPTBN1-201ENST00000333896 ZNF770Q6IQ21 691 aaPredicted RBP9.09□□□□□ -0.95
SPTBN1-201ENST00000333896 FAM117AQ9C073 453 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms