RNA–Protein interactions for RNA: ENST00000332853.8

VSTM4-202, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VSTM4, Length 6,392 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-202ENST00000332853 EFNA2O43921 213 aa11.13□□□□□ -0.63
VSTM4-202ENST00000332853 SEC11BP0C7V7 166 aa11.13□□□□□ -0.63
VSTM4-202ENST00000332853 EFNB1P98172 346 aa11.13□□□□□ -0.63
VSTM4-202ENST00000332853 LINC00470Q9BZP3 86 aa11.13□□□□□ -0.63
VSTM4-202ENST00000332853 CISD1Q9NZ45 108 aaKnown RBP11.13□□□□□ -0.63
VSTM4-202ENST00000332853 ASXL3Q9C0F0 2248 aa11.13□□□□□ -0.63
VSTM4-202ENST00000332853 HPRT1P00492 218 aa11.13□□□□□ -0.63
VSTM4-202ENST00000332853 SSTR5P35346 364 aa11.13□□□□□ -0.63
VSTM4-202ENST00000332853 TCL1AP56279 114 aa11.13□□□□□ -0.63
VSTM4-202ENST00000332853 B2MP61769 119 aa11.13□□□□□ -0.63
VSTM4-202ENST00000332853 PAX5Q02548 391 aa11.13□□□□□ -0.63
VSTM4-202ENST00000332853 FGFRL1Q8N441 504 aa11.13□□□□□ -0.63
VSTM4-202ENST00000332853 MANBALQ9NQG1 85 aa11.13□□□□□ -0.63
VSTM4-202ENST00000332853 NAT8BQ9UHF3 227 aa11.13□□□□□ -0.63
VSTM4-202ENST00000332853 C7orf77A4D0Y5 90 aa11.12□□□□□ -0.63
VSTM4-202ENST00000332853 SMPD2O60906 423 aa11.12□□□□□ -0.63
VSTM4-202ENST00000332853 SPP1P10451 314 aa11.12□□□□□ -0.63
VSTM4-202ENST00000332853 WNT5AP41221 380 aa11.12□□□□□ -0.63
VSTM4-202ENST00000332853 ZNF880Q6PDB4 577 aa11.12□□□□□ -0.63
VSTM4-202ENST00000332853 Q6ZT83 130 aa11.12□□□□□ -0.63
VSTM4-202ENST00000332853 TMEM18Q96B42 140 aa11.12□□□□□ -0.63
VSTM4-202ENST00000332853 TP53RKQ96S44 253 aa11.12□□□□□ -0.63
VSTM4-202ENST00000332853 MRPL13Q9BYD1 178 aaKnown RBP11.12□□□□□ -0.63
VSTM4-202ENST00000332853 NAT8Q9UHE5 227 aa11.12□□□□□ -0.63
VSTM4-202ENST00000332853 PLXNA4Q9HCM2 1894 aa11.12□□□□□ -0.63
VSTM4-202ENST00000332853 TGOLN2O43493 480 aa11.12□□□□□ -0.63
VSTM4-202ENST00000332853 GFRA3O60609 400 aa11.12□□□□□ -0.63
VSTM4-202ENST00000332853 FAM27E3Q08E93 113 aa11.12□□□□□ -0.63
VSTM4-202ENST00000332853 LYZL4Q96KX0 146 aa11.12□□□□□ -0.63
VSTM4-202ENST00000332853 VAX2Q9UIW0 290 aa11.12□□□□□ -0.63
VSTM4-202ENST00000332853 CACNA1EQ15878 2313 aa11.12□□□□□ -0.63
VSTM4-202ENST00000332853 LOC102723996A0A087X1L8 192 aa11.12□□□□□ -0.63
VSTM4-202ENST00000332853 DUXBA0A1W2PPF3 345 aa11.12□□□□□ -0.63
VSTM4-202ENST00000332853 LOC390937A0A1W2PQ73 354 aa11.12□□□□□ -0.63
VSTM4-202ENST00000332853 KIAA1324LA8MWY0 1029 aaPredicted RBP11.12□□□□□ -0.63
VSTM4-202ENST00000332853 H3BQ15 152 aa11.12□□□□□ -0.63
VSTM4-202ENST00000332853 OR10D4PQ8NGN7 298 aa11.12□□□□□ -0.63
VSTM4-202ENST00000332853 ARL2-SNX15V9GYD0 113 aa11.12□□□□□ -0.63
VSTM4-202ENST00000332853 MDC1Q14676 2089 aaKnown RBP11.12□□□□□ -0.63
VSTM4-202ENST00000332853 H0YL77 283 aa11.12□□□□□ -0.63
VSTM4-202ENST00000332853 ATXN7O15265 892 aaPredicted RBP11.12□□□□□ -0.63
VSTM4-202ENST00000332853 IGFBP3P17936 291 aaPredicted RBP11.12□□□□□ -0.63
VSTM4-202ENST00000332853 BSXQ3C1V8 233 aa11.12□□□□□ -0.63
VSTM4-202ENST00000332853 SLC35E3Q7Z769 313 aa11.12□□□□□ -0.63
VSTM4-202ENST00000332853 SNX22Q96L94 193 aa11.12□□□□□ -0.63
VSTM4-202ENST00000332853 GFI1Q99684 422 aa11.12□□□□□ -0.63
VSTM4-202ENST00000332853 FAM90A10PA6NDY2 464 aa11.12□□□□□ -0.63
VSTM4-202ENST00000332853 FAM90A18PA6NE21 464 aa11.12□□□□□ -0.63
VSTM4-202ENST00000332853 FAM90A16PA6NEW6 464 aa11.12□□□□□ -0.63
VSTM4-202ENST00000332853 FAM90A20PA6NIJ5 464 aa11.12□□□□□ -0.63
VSTM4-202ENST00000332853 FAM90A8PA6NJQ4 464 aa11.12□□□□□ -0.63
VSTM4-202ENST00000332853 FAM90A7PA6NKC0 464 aa11.12□□□□□ -0.63
VSTM4-202ENST00000332853 FAM90A22PA8MWA6 464 aa11.12□□□□□ -0.63
VSTM4-202ENST00000332853 FAM90A12PA8MX19 464 aa11.12□□□□□ -0.63
VSTM4-202ENST00000332853 FAM90A5PA8MXJ8 464 aa11.12□□□□□ -0.63
VSTM4-202ENST00000332853 FAM90A23PA8MXZ1 464 aa11.12□□□□□ -0.63
VSTM4-202ENST00000332853 FAM90A15PP0C7V4 464 aa11.12□□□□□ -0.63
VSTM4-202ENST00000332853 FAM90A13PP0C7W8 464 aa11.12□□□□□ -0.63
VSTM4-202ENST00000332853 FAM90A14PP0C7W9 464 aa11.12□□□□□ -0.63
VSTM4-202ENST00000332853 FAM90A24PP0C7X0 464 aa11.12□□□□□ -0.63
VSTM4-202ENST00000332853 LHX2P50458 406 aa11.12□□□□□ -0.63
VSTM4-202ENST00000332853 TMEM187Q14656 261 aa11.12□□□□□ -0.63
VSTM4-202ENST00000332853 OR4X1Q8NH49 305 aa11.12□□□□□ -0.63
VSTM4-202ENST00000332853 ZNF319Q9P2F9 582 aa11.12□□□□□ -0.63
VSTM4-202ENST00000332853 TP53BP1Q12888 1972 aaPredicted RBP11.11□□□□□ -0.63
VSTM4-202ENST00000332853 ODAMA1E959 279 aa11.11□□□□□ -0.63
VSTM4-202ENST00000332853 XKRY2A2RUG3 117 aa11.11□□□□□ -0.63
VSTM4-202ENST00000332853 GUCA2BQ16661 112 aa11.11□□□□□ -0.63
VSTM4-202ENST00000332853 ACSF3Q4G176 576 aaPredicted RBP11.11□□□□□ -0.63
VSTM4-202ENST00000332853 TOLLIPQ9H0E2 274 aa11.11□□□□□ -0.63
VSTM4-202ENST00000332853 TECRQ9NZ01 308 aaKnown RBP11.11□□□□□ -0.63
VSTM4-202ENST00000332853 MELTFP08582 738 aa11.11□□□□□ -0.63
VSTM4-202ENST00000332853 PAX6P26367 422 aa11.11□□□□□ -0.63
VSTM4-202ENST00000332853 FAM201AQ5SY85 155 aa11.11□□□□□ -0.63
VSTM4-202ENST00000332853 SAXO1Q8IYX7 474 aa11.11□□□□□ -0.63
VSTM4-202ENST00000332853 ZNRF1Q8ND25 227 aa11.11□□□□□ -0.63
VSTM4-202ENST00000332853 IGHV1-2P23083 117 aa11.11□□□□□ -0.63
VSTM4-202ENST00000332853 RPEL1Q2QD12 228 aa11.11□□□□□ -0.63
VSTM4-202ENST00000332853 PDPNQ86YL7 162 aa11.11□□□□□ -0.63
VSTM4-202ENST00000332853 SOSTQ9BQB4 213 aa11.11□□□□□ -0.63
VSTM4-202ENST00000332853 TANC1Q9C0D5 1861 aa11.11□□□□□ -0.63
VSTM4-202ENST00000332853 NPIPB7O75200 414 aa11.11□□□□□ -0.63
VSTM4-202ENST00000332853 TNFSF10P50591 281 aa11.11□□□□□ -0.63
VSTM4-202ENST00000332853 MMDQ15546 238 aa11.11□□□□□ -0.63
VSTM4-202ENST00000332853 NCMAPQ5T1S8 102 aa11.11□□□□□ -0.63
VSTM4-202ENST00000332853 TEPPQ6URK8 271 aa11.11□□□□□ -0.63
VSTM4-202ENST00000332853 CALYQ9NYX4 217 aa11.11□□□□□ -0.63
VSTM4-202ENST00000332853 MPTX1A8MV57 137 aa11.11□□□□□ -0.63
VSTM4-202ENST00000332853 S1PR2O95136 353 aa11.11□□□□□ -0.63
VSTM4-202ENST00000332853 FBP1P09467 338 aa11.11□□□□□ -0.63
VSTM4-202ENST00000332853 CD1BP29016 333 aa11.11□□□□□ -0.63
VSTM4-202ENST00000332853 CLDN18P56856 261 aa11.11□□□□□ -0.63
VSTM4-202ENST00000332853 F2RL2O00254 374 aa11.1□□□□□ -0.63
VSTM4-202ENST00000332853 NTN3O00634 580 aaPredicted RBP11.1□□□□□ -0.63
VSTM4-202ENST00000332853 PHOX2AO14813 284 aa11.1□□□□□ -0.63
VSTM4-202ENST00000332853 BTCP35070 178 aa11.1□□□□□ -0.63
VSTM4-202ENST00000332853 STPG2Q8N412 459 aa11.1□□□□□ -0.63
VSTM4-202ENST00000332853 WDYHV1Q96HA8 205 aa11.1□□□□□ -0.63
VSTM4-202ENST00000332853 CHRDL1Q9BU40 450 aa11.1□□□□□ -0.63
VSTM4-202ENST00000332853 ZNF586Q9NXT0 402 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms