RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 PRSS41Q7RTY9 318 aa14.33□□□□□ -0.12
PTCH1-201ENST00000331920 SIGLEC7Q9Y286 467 aa14.33□□□□□ -0.12
PTCH1-201ENST00000331920 EFNB2P52799 333 aa14.33□□□□□ -0.12
PTCH1-201ENST00000331920 SH2D5Q6ZV89 423 aa14.33□□□□□ -0.12
PTCH1-201ENST00000331920 OR2Y1Q8NGV0 311 aa14.33□□□□□ -0.12
PTCH1-201ENST00000331920 CRYBB2P43320 205 aa14.33□□□□□ -0.12
PTCH1-201ENST00000331920 CCL8P80075 99 aa14.33□□□□□ -0.12
PTCH1-201ENST00000331920 PMS2CLQ68D20 193 aa14.33□□□□□ -0.12
PTCH1-201ENST00000331920 FAM89BQ8N5H3 189 aa14.33□□□□□ -0.12
PTCH1-201ENST00000331920 TPRX1Q8N7U7 411 aa14.33□□□□□ -0.12
PTCH1-201ENST00000331920 OR10AG1Q8NH19 301 aa14.33□□□□□ -0.12
PTCH1-201ENST00000331920 NT5CQ8TCD5 201 aa14.33□□□□□ -0.12
PTCH1-201ENST00000331920 NEU3Q9UQ49 428 aa14.33□□□□□ -0.12
PTCH1-201ENST00000331920 CNTFRP26992 372 aa14.33□□□□□ -0.12
PTCH1-201ENST00000331920 MEF2CQ06413 473 aaPredicted RBP14.33□□□□□ -0.12
PTCH1-201ENST00000331920 SLC25A34Q6PIV7 304 aa14.33□□□□□ -0.12
PTCH1-201ENST00000331920 MRPL24Q96A35 216 aaKnown RBP14.33□□□□□ -0.12
PTCH1-201ENST00000331920 PGPA6NDG6 321 aa14.32□□□□□ -0.12
PTCH1-201ENST00000331920 IGHV3-23P01764 117 aa14.32□□□□□ -0.12
PTCH1-201ENST00000331920 FOLR2P14207 255 aa14.32□□□□□ -0.12
PTCH1-201ENST00000331920 KIAA1644Q3SXP7 199 aa14.32□□□□□ -0.12
PTCH1-201ENST00000331920 ZFP64Q9NPA5 681 aa14.32□□□□□ -0.12
PTCH1-201ENST00000331920 TAF1P21675 1872 aa14.32□□□□□ -0.12
PTCH1-201ENST00000331920 TRGC2P03986 189 aa14.32□□□□□ -0.12
PTCH1-201ENST00000331920 CTLA4P16410 223 aa14.32□□□□□ -0.12
PTCH1-201ENST00000331920 PLPPR5Q32ZL2 321 aa14.32□□□□□ -0.12
PTCH1-201ENST00000331920 FAM159AQ6UWV7 190 aa14.32□□□□□ -0.12
PTCH1-201ENST00000331920 ITLN2Q8WWU7 325 aaPredicted RBP14.32□□□□□ -0.12
PTCH1-201ENST00000331920 CTSVO60911 334 aa14.32□□□□□ -0.12
PTCH1-201ENST00000331920 VSIG10L2P0DP72 767 aa14.32□□□□□ -0.12
PTCH1-201ENST00000331920 UNQ5815/PRO19632Q6UWF5 114 aa14.32□□□□□ -0.12
PTCH1-201ENST00000331920 CT55Q8WUE5 264 aa14.32□□□□□ -0.12
PTCH1-201ENST00000331920 FGF14Q92915 247 aa14.32□□□□□ -0.12
PTCH1-201ENST00000331920 UQCR10Q9UDW1 63 aa14.32□□□□□ -0.12
PTCH1-201ENST00000331920 PROB1E7EW31 1015 aa14.32□□□□□ -0.12
PTCH1-201ENST00000331920 OR10S1Q8NGN2 331 aa14.32□□□□□ -0.12
PTCH1-201ENST00000331920 MPC1Q9Y5U8 109 aa14.32□□□□□ -0.12
PTCH1-201ENST00000331920 TRBV20OR9-2A0A075B6H5 130 aa14.32□□□□□ -0.12
PTCH1-201ENST00000331920 A0A1B0GWB2 263 aa14.32□□□□□ -0.12
PTCH1-201ENST00000331920 A0A0B4J2E0 115 aa14.32□□□□□ -0.12
PTCH1-201ENST00000331920 A0A1B0GX12 115 aa14.32□□□□□ -0.12
PTCH1-201ENST00000331920 MVDP53602 400 aa14.32□□□□□ -0.12
PTCH1-201ENST00000331920 STPG3Q8N7X2 389 aa14.32□□□□□ -0.12
PTCH1-201ENST00000331920 BCL2L10Q9HD36 194 aa14.32□□□□□ -0.12
PTCH1-201ENST00000331920 TNFRSF18Q9Y5U5 241 aa14.32□□□□□ -0.12
PTCH1-201ENST00000331920 SMCHD1A6NHR9 2005 aa14.31□□□□□ -0.12
PTCH1-201ENST00000331920 TRAV8-2A0A0B4J237 113 aa14.31□□□□□ -0.12
PTCH1-201ENST00000331920 CTXND1A0A1B0GTU2 59 aa14.31□□□□□ -0.12
PTCH1-201ENST00000331920 IGHV3-48P01763 117 aa14.31□□□□□ -0.12
PTCH1-201ENST00000331920 LINC00869P0C866 280 aa14.31□□□□□ -0.12
PTCH1-201ENST00000331920 SNRPD3P62318 126 aaKnown RBP14.31□□□□□ -0.12
PTCH1-201ENST00000331920 CFAP161Q6P656 301 aa14.31□□□□□ -0.12
PTCH1-201ENST00000331920 IGHV3-35A0A0C4DH35 117 aa14.31□□□□□ -0.12
PTCH1-201ENST00000331920 A0A1W2PRX2 142 aa14.31□□□□□ -0.12
PTCH1-201ENST00000331920 GPR6P46095 362 aaPredicted RBP14.31□□□□□ -0.12
PTCH1-201ENST00000331920 SIGLEC5O15389 551 aa14.31□□□□□ -0.12
PTCH1-201ENST00000331920 CEACAM5P06731 702 aa14.31□□□□□ -0.12
PTCH1-201ENST00000331920 SIGLEC14Q08ET2 396 aa14.31□□□□□ -0.12
PTCH1-201ENST00000331920 APOBEC4Q8WW27 367 aaKnown RBP14.31□□□□□ -0.12
PTCH1-201ENST00000331920 GAPDHP04406 335 aaKnown RBP14.31□□□□□ -0.12
PTCH1-201ENST00000331920 CTSDP07339 412 aaPredicted RBP14.31□□□□□ -0.12
PTCH1-201ENST00000331920 HBBP68871 147 aa14.31□□□□□ -0.12
PTCH1-201ENST00000331920 CEACAM4O75871 244 aa14.31□□□□□ -0.12
PTCH1-201ENST00000331920 HLA-DRB1P01911 266 aa14.31□□□□□ -0.12
PTCH1-201ENST00000331920 GZMHP20718 246 aa14.31□□□□□ -0.12
PTCH1-201ENST00000331920 SCNM1Q9BWG6 230 aa14.31□□□□□ -0.12
PTCH1-201ENST00000331920 FOXJ2Q9P0K8 574 aa14.31□□□□□ -0.12
PTCH1-201ENST00000331920 ZIC3O60481 467 aa14.3□□□□□ -0.12
PTCH1-201ENST00000331920 ANKRD20A5PA0PJZ0 165 aa14.3□□□□□ -0.12
PTCH1-201ENST00000331920 HMSDA8MTL9 139 aa14.3□□□□□ -0.12
PTCH1-201ENST00000331920 RRHO14718 337 aa14.3□□□□□ -0.12
PTCH1-201ENST00000331920 RIMKLAQ8IXN7 391 aa14.3□□□□□ -0.12
PTCH1-201ENST00000331920 PGLYRP3Q96LB9 341 aa14.3□□□□□ -0.12
PTCH1-201ENST00000331920 N4BP2Q86UW6 1770 aaPredicted RBP14.3□□□□□ -0.12
PTCH1-201ENST00000331920 ZBTB42B2RXF5 422 aa14.3□□□□□ -0.12
PTCH1-201ENST00000331920 NAT2P11245 290 aa14.3□□□□□ -0.12
PTCH1-201ENST00000331920 CFDP00746 253 aaPredicted RBP14.3□□□□□ -0.12
PTCH1-201ENST00000331920 RAE1P78406 368 aaKnown RBP14.3□□□□□ -0.12
PTCH1-201ENST00000331920 ATP5G2Q06055 141 aa14.3□□□□□ -0.12
PTCH1-201ENST00000331920 FAM219BQ5XKK7 198 aa14.3□□□□□ -0.12
PTCH1-201ENST00000331920 GABRG2P18507 467 aa14.3□□□□□ -0.12
PTCH1-201ENST00000331920 FOXB2Q5VYV0 432 aa14.3□□□□□ -0.12
PTCH1-201ENST00000331920 C17orf47Q8NEP4 570 aa14.3□□□□□ -0.12
PTCH1-201ENST00000331920 CCL13Q99616 98 aa14.3□□□□□ -0.12
PTCH1-201ENST00000331920 IGLV3-10A0A075B6K4 115 aa14.3□□□□□ -0.12
PTCH1-201ENST00000331920 DOPEY2Q9Y3R5 2298 aa14.29□□□□□ -0.12
PTCH1-201ENST00000331920 PITX3O75364 302 aa14.29□□□□□ -0.12
PTCH1-201ENST00000331920 CXCL3P19876 107 aa14.29□□□□□ -0.12
PTCH1-201ENST00000331920 FAM106AQ4KMX7 169 aa14.29□□□□□ -0.12
PTCH1-201ENST00000331920 TMEFF2Q9UIK5 374 aaPredicted RBP14.29□□□□□ -0.12
PTCH1-201ENST00000331920 LTBP3Q9NS15 1303 aa14.29□□□□□ -0.12
PTCH1-201ENST00000331920 FOXI3A8MTJ6 420 aaPredicted RBP14.29□□□□□ -0.12
PTCH1-201ENST00000331920 LRRC3BQ96PB8 259 aa14.29□□□□□ -0.12
PTCH1-201ENST00000331920 TUBD1Q9UJT1 453 aa14.29□□□□□ -0.12
PTCH1-201ENST00000331920 DOCK11Q5JSL3 2073 aa14.29□□□□□ -0.12
PTCH1-201ENST00000331920 IGHV3-49A0A0A0MS15 119 aa14.29□□□□□ -0.12
PTCH1-201ENST00000331920 MUC21A0A0G2JKD1 596 aa14.29□□□□□ -0.12
PTCH1-201ENST00000331920 MUC21A0A140T8X8 626 aa14.29□□□□□ -0.12
PTCH1-201ENST00000331920 SRIP30626 198 aa14.29□□□□□ -0.12
PTCH1-201ENST00000331920 PMCHL1Q16048 86 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms