RNA–Protein interactions for RNA: ENST00000331148.5

CLSTN3-202, Transcript of calsyntenin 3, humanhuman

TSL 1 (best)

Gene CLSTN3, Length 2,288 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-202ENST00000331148 FAM90A16PA6NEW6 464 aa15.38■□□□□ 0.05
CLSTN3-202ENST00000331148 FAM90A20PA6NIJ5 464 aa15.38■□□□□ 0.05
CLSTN3-202ENST00000331148 FAM90A8PA6NJQ4 464 aa15.38■□□□□ 0.05
CLSTN3-202ENST00000331148 FAM90A7PA6NKC0 464 aa15.38■□□□□ 0.05
CLSTN3-202ENST00000331148 FAM90A22PA8MWA6 464 aa15.38■□□□□ 0.05
CLSTN3-202ENST00000331148 FAM90A12PA8MX19 464 aa15.38■□□□□ 0.05
CLSTN3-202ENST00000331148 FAM90A5PA8MXJ8 464 aa15.38■□□□□ 0.05
CLSTN3-202ENST00000331148 FAM90A23PA8MXZ1 464 aa15.38■□□□□ 0.05
CLSTN3-202ENST00000331148 VENTXO95231 258 aa15.38■□□□□ 0.05
CLSTN3-202ENST00000331148 FAM90A15PP0C7V4 464 aa15.38■□□□□ 0.05
CLSTN3-202ENST00000331148 FAM90A13PP0C7W8 464 aa15.38■□□□□ 0.05
CLSTN3-202ENST00000331148 FAM90A14PP0C7W9 464 aa15.38■□□□□ 0.05
CLSTN3-202ENST00000331148 FAM90A24PP0C7X0 464 aa15.38■□□□□ 0.05
CLSTN3-202ENST00000331148 FKBP2P26885 142 aaKnown RBP15.38■□□□□ 0.05
CLSTN3-202ENST00000331148 S100GP29377 79 aa15.38■□□□□ 0.05
CLSTN3-202ENST00000331148 GCH1P30793 250 aa15.38■□□□□ 0.05
CLSTN3-202ENST00000331148 BRS3P32247 399 aa15.38■□□□□ 0.05
CLSTN3-202ENST00000331148 CHRNA7P36544 502 aa15.38■□□□□ 0.05
CLSTN3-202ENST00000331148 DCAF12Q5T6F0 453 aa15.38■□□□□ 0.05
CLSTN3-202ENST00000331148 PRR18Q8N4B5 295 aa15.38■□□□□ 0.05
CLSTN3-202ENST00000331148 MANBALQ9NQG1 85 aa15.38■□□□□ 0.05
CLSTN3-202ENST00000331148 LOXL2Q9Y4K0 774 aa15.38■□□□□ 0.05
CLSTN3-202ENST00000331148 CTXN2P0C2S0 81 aa15.37■□□□□ 0.05
CLSTN3-202ENST00000331148 ACSM6Q6P461 480 aa15.37■□□□□ 0.05
CLSTN3-202ENST00000331148 TOMM20LQ6UXN7 152 aa15.37■□□□□ 0.05
CLSTN3-202ENST00000331148 GPR35Q9HC97 309 aa15.37■□□□□ 0.05
CLSTN3-202ENST00000331148 PARD6AQ9NPB6 346 aa15.37■□□□□ 0.05
CLSTN3-202ENST00000331148 TIMM9Q9Y5J7 89 aa15.37■□□□□ 0.05
CLSTN3-202ENST00000331148 PXMP4Q9Y6I8 212 aa15.37■□□□□ 0.05
CLSTN3-202ENST00000331148 MED12Q93074 2177 aa15.37■□□□□ 0.05
CLSTN3-202ENST00000331148 KIAA2026Q5HYC2 2103 aa15.37■□□□□ 0.05
CLSTN3-202ENST00000331148 PIGBOS1A0A0B4J2F0 54 aa15.37■□□□□ 0.05
CLSTN3-202ENST00000331148 ZNF816-ZNF321PA0A0X1KG74 233 aa15.37■□□□□ 0.05
CLSTN3-202ENST00000331148 CD300LBA8K4G0 201 aa15.37■□□□□ 0.05
CLSTN3-202ENST00000331148 HSPB6O14558 160 aa15.37■□□□□ 0.05
CLSTN3-202ENST00000331148 YPEL1O60688 119 aa15.37■□□□□ 0.05
CLSTN3-202ENST00000331148 TNFSF13O75888 250 aa15.37■□□□□ 0.05
CLSTN3-202ENST00000331148 IGKV1-39P01597 117 aa15.37■□□□□ 0.05
CLSTN3-202ENST00000331148 IGKV1D-39P04432 117 aa15.37■□□□□ 0.05
CLSTN3-202ENST00000331148 BCL3P20749 454 aa15.37■□□□□ 0.05
CLSTN3-202ENST00000331148 PPP1CBP62140 327 aa15.37■□□□□ 0.05
CLSTN3-202ENST00000331148 CST9LP1Q5W188 147 aa15.37■□□□□ 0.05
CLSTN3-202ENST00000331148 OR5T1Q8NG75 326 aa15.37■□□□□ 0.05
CLSTN3-202ENST00000331148 OR1K1Q8NGR3 316 aa15.37■□□□□ 0.05
CLSTN3-202ENST00000331148 WDYHV1Q96HA8 205 aa15.37■□□□□ 0.05
CLSTN3-202ENST00000331148 YPEL2Q96QA6 119 aa15.37■□□□□ 0.05
CLSTN3-202ENST00000331148 ZNF391Q9UJN7 358 aa15.37■□□□□ 0.05
CLSTN3-202ENST00000331148 ATP23Q9Y6H3 246 aa15.37■□□□□ 0.05
CLSTN3-202ENST00000331148 CTXND1A0A1B0GTU2 59 aa15.36■□□□□ 0.05
CLSTN3-202ENST00000331148 OR6C6A6NF89 314 aa15.36■□□□□ 0.05
CLSTN3-202ENST00000331148 DLL1O00548 723 aa15.36■□□□□ 0.05
CLSTN3-202ENST00000331148 SELEP16581 610 aa15.36■□□□□ 0.05
CLSTN3-202ENST00000331148 UBE2NP61088 152 aaKnown RBP15.36■□□□□ 0.05
CLSTN3-202ENST00000331148 SLC38A11Q08AI6 406 aa15.36■□□□□ 0.05
CLSTN3-202ENST00000331148 KRTAP27-1Q3LI81 207 aa15.36■□□□□ 0.05
CLSTN3-202ENST00000331148 SPANXN5Q5MJ07 72 aa15.36■□□□□ 0.05
CLSTN3-202ENST00000331148 TEX43Q6ZNM6 134 aa15.36■□□□□ 0.05
CLSTN3-202ENST00000331148 TMEM144Q7Z5S9 345 aa15.36■□□□□ 0.05
CLSTN3-202ENST00000331148 ZIC4Q8N9L1 334 aa15.36■□□□□ 0.05
CLSTN3-202ENST00000331148 Q8NFD4 153 aa15.36■□□□□ 0.05
CLSTN3-202ENST00000331148 OR10V1Q8NGI7 309 aa15.36■□□□□ 0.05
CLSTN3-202ENST00000331148 LSM10Q969L4 123 aaKnown RBP15.36■□□□□ 0.05
CLSTN3-202ENST00000331148 NEIL1Q96FI4 390 aaPredicted RBP15.36■□□□□ 0.05
CLSTN3-202ENST00000331148 A0A0U1RQK1 487 aa15.36■□□□□ 0.05
CLSTN3-202ENST00000331148 ZNF320A2RRD8 509 aa15.36■□□□□ 0.05
CLSTN3-202ENST00000331148 PATE4P0C8F1 98 aa15.36■□□□□ 0.05
CLSTN3-202ENST00000331148 CLDN15P56746 228 aa15.36■□□□□ 0.05
CLSTN3-202ENST00000331148 PRAMEF20Q5VT98 475 aa15.36■□□□□ 0.05
CLSTN3-202ENST00000331148 PCSK4Q6UW60 755 aa15.36■□□□□ 0.05
CLSTN3-202ENST00000331148 MLNRO43193 412 aa15.35■□□□□ 0.05
CLSTN3-202ENST00000331148 KLF7O75840 302 aaPredicted RBP15.35■□□□□ 0.05
CLSTN3-202ENST00000331148 ZFAND5O76080 213 aa15.35■□□□□ 0.05
CLSTN3-202ENST00000331148 VAMP5O95183 116 aa15.35■□□□□ 0.05
CLSTN3-202ENST00000331148 IL6RP08887 468 aaPredicted RBP15.35■□□□□ 0.05
CLSTN3-202ENST00000331148 TNFSF10P50591 281 aa15.35■□□□□ 0.05
CLSTN3-202ENST00000331148 ANKRD39Q53RE8 183 aa15.35■□□□□ 0.05
CLSTN3-202ENST00000331148 CMTM2Q8TAZ6 248 aa15.35■□□□□ 0.05
CLSTN3-202ENST00000331148 NEK7Q8TDX7 302 aa15.35■□□□□ 0.05
CLSTN3-202ENST00000331148 TECTBQ96PL2 329 aa15.35■□□□□ 0.05
CLSTN3-202ENST00000331148 HS3ST6Q96QI5 342 aa15.35■□□□□ 0.05
CLSTN3-202ENST00000331148 OR2J1Q9GZK6 312 aa15.35■□□□□ 0.05
CLSTN3-202ENST00000331148 TMEM106BQ9NUM4 274 aa15.35■□□□□ 0.05
CLSTN3-202ENST00000331148 LOC102723996A0A087X1L8 192 aa15.34■□□□□ 0.05
CLSTN3-202ENST00000331148 IGKV1-5P01602 117 aa15.34■□□□□ 0.05
CLSTN3-202ENST00000331148 ZNF32P17041 273 aa15.34■□□□□ 0.05
CLSTN3-202ENST00000331148 TDRG1Q3Y452 100 aa15.34■□□□□ 0.05
CLSTN3-202ENST00000331148 TPTE2P1Q5T6R2 138 aa15.34■□□□□ 0.05
CLSTN3-202ENST00000331148 DMRTA1Q5VZB9 504 aa15.34■□□□□ 0.05
CLSTN3-202ENST00000331148 ZNF324BQ6AW86 544 aaPredicted RBP15.34■□□□□ 0.05
CLSTN3-202ENST00000331148 Q6ZWC4 215 aa15.34■□□□□ 0.05
CLSTN3-202ENST00000331148 SPACA9Q96E40 222 aaPredicted RBP15.34■□□□□ 0.05
CLSTN3-202ENST00000331148 ZPBPQ9BS86 351 aa15.34■□□□□ 0.05
CLSTN3-202ENST00000331148 PAGE4O60829 102 aa15.34■□□□□ 0.05
CLSTN3-202ENST00000331148 UMODP07911 640 aa15.34■□□□□ 0.05
CLSTN3-202ENST00000331148 CD33P20138 364 aa15.34■□□□□ 0.05
CLSTN3-202ENST00000331148 BTF3L4Q96K17 158 aa15.34■□□□□ 0.05
CLSTN3-202ENST00000331148 IL36RNQ9UBH0 155 aa15.34■□□□□ 0.05
CLSTN3-202ENST00000331148 OR2W1Q9Y3N9 320 aa15.34■□□□□ 0.05
CLSTN3-202ENST00000331148 C1QTNF9BB2RNN3 333 aa15.33■□□□□ 0.05
CLSTN3-202ENST00000331148 NPPCP23582 126 aa15.33■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms