RNA–Protein interactions for RNA: ENST00000324685.10

RNF40-201, Transcript of ring finger protein 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF40, Length 5,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-201ENST00000324685 TTC3P53804 2025 aa18.21■□□□□ 0.51
RNF40-201ENST00000324685 ZNF98A6NK75 572 aa18.21■□□□□ 0.51
RNF40-201ENST00000324685 AMY1AP04745 511 aa18.21■□□□□ 0.51
RNF40-201ENST00000324685 METTL26Q96S19 204 aa18.21■□□□□ 0.51
RNF40-201ENST00000324685 PCGF1Q9BSM1 259 aa18.21■□□□□ 0.51
RNF40-201ENST00000324685 MYO9BQ13459 2157 aa18.21■□□□□ 0.51
RNF40-201ENST00000324685 BTF3P20290 206 aaKnown RBP18.21■□□□□ 0.51
RNF40-201ENST00000324685 HSPB7Q9UBY9 170 aa18.21■□□□□ 0.51
RNF40-201ENST00000324685 PRRC2BQ5JSZ5 2229 aaKnown RBP18.21■□□□□ 0.51
RNF40-201ENST00000324685 A0A0J9YW62 118 aa18.21■□□□□ 0.51
RNF40-201ENST00000324685 WISP3O95389 354 aaPredicted RBP18.21■□□□□ 0.51
RNF40-201ENST00000324685 FABP2P12104 132 aa18.21■□□□□ 0.51
RNF40-201ENST00000324685 STPG3Q8N7X2 389 aa18.21■□□□□ 0.51
RNF40-201ENST00000324685 TMEM45BQ96B21 275 aa18.21■□□□□ 0.51
RNF40-201ENST00000324685 CENPVL1A0A0U1RR11 272 aa18.2■□□□□ 0.5
RNF40-201ENST00000324685 OR2H2O95918 312 aa18.2■□□□□ 0.5
RNF40-201ENST00000324685 ISG15P05161 165 aa18.2■□□□□ 0.5
RNF40-201ENST00000324685 LINC00869P0C866 280 aa18.2■□□□□ 0.5
RNF40-201ENST00000324685 MEF2BQ02080 365 aaPredicted RBP18.2■□□□□ 0.5
RNF40-201ENST00000324685 C16orf92Q96LL3 132 aa18.2■□□□□ 0.5
RNF40-201ENST00000324685 UBE2L6O14933 153 aa18.2■□□□□ 0.5
RNF40-201ENST00000324685 F12P00748 615 aaPredicted RBP18.2■□□□□ 0.5
RNF40-201ENST00000324685 SFTPCP11686 197 aa18.2■□□□□ 0.5
RNF40-201ENST00000324685 RPS20P60866 119 aaKnown RBP18.2■□□□□ 0.5
RNF40-201ENST00000324685 RSG1Q9BU20 258 aa18.2■□□□□ 0.5
RNF40-201ENST00000324685 FAM106CPP0CH98 169 aa18.2■□□□□ 0.5
RNF40-201ENST00000324685 CCL13Q99616 98 aa18.2■□□□□ 0.5
RNF40-201ENST00000324685 IFNL4K9M1U5 179 aa18.2■□□□□ 0.5
RNF40-201ENST00000324685 HLA-DQB1P01920 261 aa18.2■□□□□ 0.5
RNF40-201ENST00000324685 HKR1P10072 659 aa18.2■□□□□ 0.5
RNF40-201ENST00000324685 GUCA2BQ16661 112 aa18.2■□□□□ 0.5
RNF40-201ENST00000324685 RFLNBQ8N5W9 214 aa18.2■□□□□ 0.5
RNF40-201ENST00000324685 CDX2Q99626 313 aaPredicted RBP18.2■□□□□ 0.5
RNF40-201ENST00000324685 FAM90A26D6RGX4 464 aa18.19■□□□□ 0.5
RNF40-201ENST00000324685 OR1P1Q8NH06 330 aa18.19■□□□□ 0.5
RNF40-201ENST00000324685 GPR61Q9BZJ8 451 aa18.19■□□□□ 0.5
RNF40-201ENST00000324685 ZNF430Q9H8G1 570 aaPredicted RBP18.19■□□□□ 0.5
RNF40-201ENST00000324685 TRBV23-1A0A0A0MS06 115 aa18.19■□□□□ 0.5
RNF40-201ENST00000324685 CKS2P33552 79 aa18.19■□□□□ 0.5
RNF40-201ENST00000324685 P2RY6Q15077 328 aa18.19■□□□□ 0.5
RNF40-201ENST00000324685 ERASQ7Z444 233 aa18.19■□□□□ 0.5
RNF40-201ENST00000324685 METTL1Q9UBP6 276 aaKnown RBP18.19■□□□□ 0.5
RNF40-201ENST00000324685 C12orf54Q6X4T0 127 aa18.19■□□□□ 0.5
RNF40-201ENST00000324685 KCNAB3O43448 404 aa18.19■□□□□ 0.5
RNF40-201ENST00000324685 FCARP24071 287 aa18.19■□□□□ 0.5
RNF40-201ENST00000324685 SIGLEC14Q08ET2 396 aa18.19■□□□□ 0.5
RNF40-201ENST00000324685 LSM10Q969L4 123 aaKnown RBP18.19■□□□□ 0.5
RNF40-201ENST00000324685 PSG9Q00887 426 aa18.19■□□□□ 0.5
RNF40-201ENST00000324685 FAM53AQ6NSI3 398 aaPredicted RBP18.19■□□□□ 0.5
RNF40-201ENST00000324685 PQLC2Q6ZP29 291 aa18.19■□□□□ 0.5
RNF40-201ENST00000324685 MMD2Q8IY49 270 aa18.19■□□□□ 0.5
RNF40-201ENST00000324685 CISD1Q9NZ45 108 aaKnown RBP18.19■□□□□ 0.5
RNF40-201ENST00000324685 GAGE10A6NGK3 116 aa18.18■□□□□ 0.5
RNF40-201ENST00000324685 NMBP08949 121 aa18.18■□□□□ 0.5
RNF40-201ENST00000324685 AQP3Q92482 292 aa18.18■□□□□ 0.5
RNF40-201ENST00000324685 ZNF501Q96CX3 271 aaPredicted RBP18.18■□□□□ 0.5
RNF40-201ENST00000324685 CCL21O00585 134 aa18.18■□□□□ 0.5
RNF40-201ENST00000324685 ZFP36L2P47974 494 aaKnown RBP18.18■□□□□ 0.5
RNF40-201ENST00000324685 RPL8P62917 257 aaKnown RBP18.18■□□□□ 0.5
RNF40-201ENST00000324685 IGHV1-45A0A0A0MS14 117 aa18.18■□□□□ 0.5
RNF40-201ENST00000324685 TAF15Q92804 592 aaKnown RBP eCLIP18.18■□□□□ 0.5
RNF40-201ENST00000324685 WNT9BO14905 357 aa18.18■□□□□ 0.5
RNF40-201ENST00000324685 TSPAN2O60636 221 aa18.18■□□□□ 0.5
RNF40-201ENST00000324685 TRGC2P03986 189 aa18.18■□□□□ 0.5
RNF40-201ENST00000324685 IL11P20809 199 aa18.18■□□□□ 0.5
RNF40-201ENST00000324685 MPV17P39210 176 aa18.18■□□□□ 0.5
RNF40-201ENST00000324685 SLC25A47Q6Q0C1 308 aa18.18■□□□□ 0.5
RNF40-201ENST00000324685 SHISA5Q8N114 240 aa18.18■□□□□ 0.5
RNF40-201ENST00000324685 PGLYRP1O75594 196 aaPredicted RBP18.17■□□□□ 0.5
RNF40-201ENST00000324685 MUC15Q8N387 334 aa18.17■□□□□ 0.5
RNF40-201ENST00000324685 COPS9Q8WXC6 57 aa18.17■□□□□ 0.5
RNF40-201ENST00000324685 PKIBQ9C010 78 aa18.17■□□□□ 0.5
RNF40-201ENST00000324685 ID4P47928 161 aa18.17■□□□□ 0.5
RNF40-201ENST00000324685 C1orf100Q5SVJ3 147 aa18.17■□□□□ 0.5
RNF40-201ENST00000324685 DNLZQ5SXM8 178 aa18.17■□□□□ 0.5
RNF40-201ENST00000324685 ZNF660Q6AZW8 331 aaPredicted RBP18.17■□□□□ 0.5
RNF40-201ENST00000324685 SCTP09683 121 aa18.17■□□□□ 0.5
RNF40-201ENST00000324685 SLC35B1P78383 322 aa18.17■□□□□ 0.5
RNF40-201ENST00000324685 TM4SF20Q53R12 229 aa18.17■□□□□ 0.5
RNF40-201ENST00000324685 FAM214BQ7L5A3 538 aa18.17■□□□□ 0.5
RNF40-201ENST00000324685 SELENOHQ8IZQ5 122 aaKnown RBP18.17■□□□□ 0.5
RNF40-201ENST00000324685 COMPP49747 757 aaPredicted RBP18.17■□□□□ 0.5
RNF40-201ENST00000324685 TCTAP57738 103 aa18.17■□□□□ 0.5
RNF40-201ENST00000324685 AQP10Q96PS8 301 aa18.17■□□□□ 0.5
RNF40-201ENST00000324685 CHRNA10Q9GZZ6 450 aa18.17■□□□□ 0.5
RNF40-201ENST00000324685 MDKP21741 143 aaPredicted RBP18.17■□□□□ 0.5
RNF40-201ENST00000324685 HERPUD1Q15011 391 aa18.17■□□□□ 0.5
RNF40-201ENST00000324685 MAP1LC3AQ9H492 121 aa18.17■□□□□ 0.5
RNF40-201ENST00000324685 ADRA2AP08913 450 aa18.16■□□□□ 0.5
RNF40-201ENST00000324685 SCGB1A1P11684 91 aa18.16■□□□□ 0.5
RNF40-201ENST00000324685 P2RY4P51582 365 aa18.16■□□□□ 0.5
RNF40-201ENST00000324685 KRTCAP3Q53RY4 240 aa18.16■□□□□ 0.5
RNF40-201ENST00000324685 KCNK17Q96T54 332 aa18.16■□□□□ 0.5
RNF40-201ENST00000324685 MRPL18Q9H0U6 180 aaKnown RBP18.16■□□□□ 0.5
RNF40-201ENST00000324685 IFI6P09912 130 aa18.16■□□□□ 0.5
RNF40-201ENST00000324685 UCNP55089 124 aa18.16■□□□□ 0.5
RNF40-201ENST00000324685 IDI2-AS1Q9NZ38 188 aa18.16■□□□□ 0.5
RNF40-201ENST00000324685 TRAV30A0A087WSZ9 112 aa18.16■□□□□ 0.5
RNF40-201ENST00000324685 NAT2P11245 290 aa18.16■□□□□ 0.5
RNF40-201ENST00000324685 IFITM3Q01628 133 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms