RNA–Protein interactions for RNA: ENST00000319172.9

TMEM39A-201, Transcript of transmembrane protein 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM39A, Length 4,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-201ENST00000319172 COX6B1P14854 86 aa7.89□□□□□ -1.15
TMEM39A-201ENST00000319172 S100PP25815 95 aa7.89□□□□□ -1.15
TMEM39A-201ENST00000319172 SUB1P53999 127 aaKnown RBP eCLIP7.89□□□□□ -1.15
TMEM39A-201ENST00000319172 MUC15Q8N387 334 aa7.89□□□□□ -1.15
TMEM39A-201ENST00000319172 R3HDM4Q96D70 268 aa7.89□□□□□ -1.15
TMEM39A-201ENST00000319172 GNPNAT1Q96EK6 184 aaPredicted RBP7.89□□□□□ -1.15
TMEM39A-201ENST00000319172 SNX22Q96L94 193 aa7.89□□□□□ -1.15
TMEM39A-201ENST00000319172 CIB3Q96Q77 187 aaPredicted RBP7.89□□□□□ -1.15
TMEM39A-201ENST00000319172 SLC35D1Q9NTN3 355 aa7.89□□□□□ -1.15
TMEM39A-201ENST00000319172 LDLRAD4O15165 306 aa7.88□□□□□ -1.15
TMEM39A-201ENST00000319172 SYNGR2O43760 224 aa7.88□□□□□ -1.15
TMEM39A-201ENST00000319172 HRASP01112 189 aa7.88□□□□□ -1.15
TMEM39A-201ENST00000319172 RSPO1Q2MKA7 263 aaPredicted RBP7.88□□□□□ -1.15
TMEM39A-201ENST00000319172 ACP7Q6ZNF0 438 aa7.88□□□□□ -1.15
TMEM39A-201ENST00000319172 ZNF818PQ6ZRF7 136 aa7.88□□□□□ -1.15
TMEM39A-201ENST00000319172 FAM89BQ8N5H3 189 aa7.88□□□□□ -1.15
TMEM39A-201ENST00000319172 MRPL37Q9BZE1 423 aaKnown RBP7.88□□□□□ -1.15
TMEM39A-201ENST00000319172 HIF1ANQ9NWT6 349 aa7.88□□□□□ -1.15
TMEM39A-201ENST00000319172 A8MXE2 369 aa7.88□□□□□ -1.15
TMEM39A-201ENST00000319172 KRBOX1C9JBD0 128 aa7.88□□□□□ -1.15
TMEM39A-201ENST00000319172 TIMP3P35625 211 aa7.88□□□□□ -1.15
TMEM39A-201ENST00000319172 ZNF474Q6S9Z5 364 aaPredicted RBP7.88□□□□□ -1.15
TMEM39A-201ENST00000319172 C5orf24Q7Z6I8 188 aa7.88□□□□□ -1.15
TMEM39A-201ENST00000319172 CRYM-AS1A6NIL9 109 aa7.88□□□□□ -1.15
TMEM39A-201ENST00000319172 PROB1E7EW31 1015 aa7.88□□□□□ -1.15
TMEM39A-201ENST00000319172 HBE1P02100 147 aa7.88□□□□□ -1.15
TMEM39A-201ENST00000319172 CT45A6P0DMU7 189 aa7.88□□□□□ -1.15
TMEM39A-201ENST00000319172 CT45A5P0DMU8 189 aa7.88□□□□□ -1.15
TMEM39A-201ENST00000319172 CT45A7P0DMV0 189 aa7.88□□□□□ -1.15
TMEM39A-201ENST00000319172 CT45A1Q5HYN5 189 aa7.88□□□□□ -1.15
TMEM39A-201ENST00000319172 SOHLH1Q5JUK2 328 aa7.88□□□□□ -1.15
TMEM39A-201ENST00000319172 CT45A3Q8NHU0 189 aa7.88□□□□□ -1.15
TMEM39A-201ENST00000319172 AKR1E2Q96JD6 320 aa7.88□□□□□ -1.15
TMEM39A-201ENST00000319172 RAB40CQ96S21 281 aa7.88□□□□□ -1.15
TMEM39A-201ENST00000319172 IL36GQ9NZH8 169 aa7.88□□□□□ -1.15
TMEM39A-201ENST00000319172 PRRC2CQ9Y520 2896 aaKnown RBP7.87□□□□□ -1.15
TMEM39A-201ENST00000319172 TXNL1O43396 289 aa7.87□□□□□ -1.15
TMEM39A-201ENST00000319172 PGLYRP1O75594 196 aaPredicted RBP7.87□□□□□ -1.15
TMEM39A-201ENST00000319172 CLLU1Q5K131 121 aa7.87□□□□□ -1.15
TMEM39A-201ENST00000319172 FAM216BQ8N7L0 139 aa7.87□□□□□ -1.15
TMEM39A-201ENST00000319172 GNG13Q9P2W3 67 aa7.87□□□□□ -1.15
TMEM39A-201ENST00000319172 A0A0G2JNJ9 132 aa7.87□□□□□ -1.15
TMEM39A-201ENST00000319172 MBD3L4A6NDZ8 208 aaPredicted RBP7.87□□□□□ -1.15
TMEM39A-201ENST00000319172 MBD3L3A6NE82 208 aaPredicted RBP7.87□□□□□ -1.15
TMEM39A-201ENST00000319172 MBD3L5A6NJ08 208 aaPredicted RBP7.87□□□□□ -1.15
TMEM39A-201ENST00000319172 K7ENP7 123 aa7.87□□□□□ -1.15
TMEM39A-201ENST00000319172 SCO1O75880 301 aa7.87□□□□□ -1.15
TMEM39A-201ENST00000319172 CDS2O95674 445 aa7.87□□□□□ -1.15
TMEM39A-201ENST00000319172 CXorf66Q5JRM2 361 aaPredicted RBP7.87□□□□□ -1.15
TMEM39A-201ENST00000319172 ZNF529Q6P280 563 aa7.87□□□□□ -1.15
TMEM39A-201ENST00000319172 SSX8Q7RTT4 187 aa7.87□□□□□ -1.15
TMEM39A-201ENST00000319172 OR8B3Q8NGG8 313 aa7.87□□□□□ -1.15
TMEM39A-201ENST00000319172 OR4S2Q8NH73 311 aa7.87□□□□□ -1.15
TMEM39A-201ENST00000319172 MBD3L2Q8NHZ7 208 aaPredicted RBP7.87□□□□□ -1.15
TMEM39A-201ENST00000319172 PLPPR1Q8TBJ4 325 aa7.87□□□□□ -1.15
TMEM39A-201ENST00000319172 OR8B2Q96RD0 313 aa7.87□□□□□ -1.15
TMEM39A-201ENST00000319172 C20orf24Q9BUV8 137 aa7.87□□□□□ -1.15
TMEM39A-201ENST00000319172 TMEM222Q9H0R3 208 aa7.87□□□□□ -1.15
TMEM39A-201ENST00000319172 Q9UFV3 132 aa7.87□□□□□ -1.15
TMEM39A-201ENST00000319172 IL19Q9UHD0 177 aa7.87□□□□□ -1.15
TMEM39A-201ENST00000319172 C12orf77C9JDV5 145 aa7.87□□□□□ -1.15
TMEM39A-201ENST00000319172 NDUFS8O00217 210 aa7.87□□□□□ -1.15
TMEM39A-201ENST00000319172 WISP2O76076 250 aa7.87□□□□□ -1.15
TMEM39A-201ENST00000319172 CD37P11049 281 aa7.87□□□□□ -1.15
TMEM39A-201ENST00000319172 S100A7P31151 101 aa7.87□□□□□ -1.15
TMEM39A-201ENST00000319172 ERHP84090 104 aaKnown RBP7.87□□□□□ -1.15
TMEM39A-201ENST00000319172 SVBPQ8N300 66 aa7.87□□□□□ -1.15
TMEM39A-201ENST00000319172 POC1AQ8NBT0 407 aa7.87□□□□□ -1.15
TMEM39A-201ENST00000319172 LHX4Q969G2 390 aa7.87□□□□□ -1.15
TMEM39A-201ENST00000319172 MARS2Q96GW9 593 aaKnown RBP7.87□□□□□ -1.15
TMEM39A-201ENST00000319172 CALYQ9NYX4 217 aa7.87□□□□□ -1.15
TMEM39A-201ENST00000319172 TNFSF18Q9UNG2 199 aa7.87□□□□□ -1.15
TMEM39A-201ENST00000319172 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.87□□□□□ -1.15
TMEM39A-201ENST00000319172 SOX15O60248 233 aa7.87□□□□□ -1.15
TMEM39A-201ENST00000319172 CFDP00746 253 aaPredicted RBP7.87□□□□□ -1.15
TMEM39A-201ENST00000319172 PGA5P0DJD9 388 aa7.87□□□□□ -1.15
TMEM39A-201ENST00000319172 ZNF14P17017 642 aaPredicted RBP7.87□□□□□ -1.15
TMEM39A-201ENST00000319172 FGF7P21781 194 aa7.87□□□□□ -1.15
TMEM39A-201ENST00000319172 SLC38A11Q08AI6 406 aa7.87□□□□□ -1.15
TMEM39A-201ENST00000319172 SLC35E1Q96K37 410 aa7.87□□□□□ -1.15
TMEM39A-201ENST00000319172 TP53RKQ96S44 253 aa7.87□□□□□ -1.15
TMEM39A-201ENST00000319172 DIRC2Q96SL1 478 aa7.87□□□□□ -1.15
TMEM39A-201ENST00000319172 MPTX1A8MV57 137 aa7.86□□□□□ -1.15
TMEM39A-201ENST00000319172 NHLH2Q02577 135 aa7.86□□□□□ -1.15
TMEM39A-201ENST00000319172 SPSB4Q96A44 273 aa7.86□□□□□ -1.15
TMEM39A-201ENST00000319172 ACY3Q96HD9 319 aa7.86□□□□□ -1.15
TMEM39A-201ENST00000319172 ABHD14AQ9BUJ0 271 aa7.86□□□□□ -1.15
TMEM39A-201ENST00000319172 SLC25A15Q9Y619 301 aa7.86□□□□□ -1.15
TMEM39A-201ENST00000319172 IGHV3-72A0A0B4J1Y9 119 aa7.86□□□□□ -1.15
TMEM39A-201ENST00000319172 TRAV24A0A0B4J272 114 aa7.86□□□□□ -1.15
TMEM39A-201ENST00000319172 PTBP3O95758 552 aaKnown RBP7.86□□□□□ -1.15
TMEM39A-201ENST00000319172 ZNF735P0CB33 412 aa7.86□□□□□ -1.15
TMEM39A-201ENST00000319172 DYNLT3P51808 116 aa7.86□□□□□ -1.15
TMEM39A-201ENST00000319172 P2RX3P56373 397 aa7.86□□□□□ -1.15
TMEM39A-201ENST00000319172 WDR82Q6UXN9 313 aa7.86□□□□□ -1.15
TMEM39A-201ENST00000319172 OR13A1Q8NGR1 328 aa7.86□□□□□ -1.15
TMEM39A-201ENST00000319172 CXorf58Q96LI9 332 aa7.86□□□□□ -1.15
TMEM39A-201ENST00000319172 HSD17B10Q99714 261 aaKnown RBP7.86□□□□□ -1.15
TMEM39A-201ENST00000319172 ARV1Q9H2C2 271 aa7.86□□□□□ -1.15
TMEM39A-201ENST00000319172 RCC2Q9P258 522 aaKnown RBP7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms