RNA–Protein interactions for RNA: ENST00000318023.11

CAPN3-201, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 3,172 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-201ENST00000318023 ARHGAP5-AS1Q96IT6 56 aa8.03□□□□□ -1.12
CAPN3-201ENST00000318023 CTDSP1Q9GZU7 261 aa8.03□□□□□ -1.12
CAPN3-201ENST00000318023 SLC2A9Q9NRM0 540 aa8.03□□□□□ -1.12
CAPN3-201ENST00000318023 CSMD2Q7Z408 3487 aa8.03□□□□□ -1.12
CAPN3-201ENST00000318023 DCHS2Q6V1P9 2916 aa8.03□□□□□ -1.12
CAPN3-201ENST00000318023 IGSF23A1L1A6 192 aa8.03□□□□□ -1.12
CAPN3-201ENST00000318023 CDS2O95674 445 aa8.03□□□□□ -1.12
CAPN3-201ENST00000318023 CTSDP07339 412 aaPredicted RBP8.03□□□□□ -1.12
CAPN3-201ENST00000318023 BIDP55957 195 aa8.03□□□□□ -1.12
CAPN3-201ENST00000318023 KRTDAPP60985 99 aa8.03□□□□□ -1.12
CAPN3-201ENST00000318023 TMEM41BQ5BJD5 291 aa8.03□□□□□ -1.12
CAPN3-201ENST00000318023 GPR157Q5UAW9 335 aa8.03□□□□□ -1.12
CAPN3-201ENST00000318023 H1FOOQ8IZA3 346 aaPredicted RBP8.03□□□□□ -1.12
CAPN3-201ENST00000318023 OR2M7Q8NG81 312 aa8.03□□□□□ -1.12
CAPN3-201ENST00000318023 OTOSQ8NHW6 89 aa8.03□□□□□ -1.12
CAPN3-201ENST00000318023 EMG1Q92979 244 aaKnown RBP8.03□□□□□ -1.12
CAPN3-201ENST00000318023 FAM103A1Q9BTL3 118 aaKnown RBP8.03□□□□□ -1.12
CAPN3-201ENST00000318023 MEGF9Q9H1U4 602 aa8.03□□□□□ -1.12
CAPN3-201ENST00000318023 ERRFI1Q9UJM3 462 aaPredicted RBP8.03□□□□□ -1.12
CAPN3-201ENST00000318023 RHBDD3Q9Y3P4 386 aa8.03□□□□□ -1.12
CAPN3-201ENST00000318023 SELENOKQ9Y6D0 94 aa8.03□□□□□ -1.12
CAPN3-201ENST00000318023 ODAMA1E959 279 aa8.02□□□□□ -1.13
CAPN3-201ENST00000318023 KLRC4-KLRK1H3BQV0 150 aa8.02□□□□□ -1.13
CAPN3-201ENST00000318023 P2RY10O00398 339 aa8.02□□□□□ -1.13
CAPN3-201ENST00000318023 HYPMO75409 117 aa8.02□□□□□ -1.13
CAPN3-201ENST00000318023 HRASP01112 189 aa8.02□□□□□ -1.13
CAPN3-201ENST00000318023 BCL2P10415 239 aa8.02□□□□□ -1.13
CAPN3-201ENST00000318023 IGLV3-21P80748 117 aaPredicted RBP8.02□□□□□ -1.13
CAPN3-201ENST00000318023 ZNF117Q03924 483 aa8.02□□□□□ -1.13
CAPN3-201ENST00000318023 FUT7Q11130 342 aa8.02□□□□□ -1.13
CAPN3-201ENST00000318023 ALG10Q5BKT4 473 aa8.02□□□□□ -1.13
CAPN3-201ENST00000318023 C1orf100Q5SVJ3 147 aa8.02□□□□□ -1.13
CAPN3-201ENST00000318023 TCF23Q7RTU1 214 aa8.02□□□□□ -1.13
CAPN3-201ENST00000318023 OR5C1Q8NGR4 320 aa8.02□□□□□ -1.13
CAPN3-201ENST00000318023 OR2T10Q8NGZ9 312 aa8.02□□□□□ -1.13
CAPN3-201ENST00000318023 THRSPQ92748 146 aa8.02□□□□□ -1.13
CAPN3-201ENST00000318023 KTI12Q96EK9 354 aaPredicted RBP8.02□□□□□ -1.13
CAPN3-201ENST00000318023 TTTY12Q9BZ98 90 aa8.02□□□□□ -1.13
CAPN3-201ENST00000318023 MAGT1Q9H0U3 335 aa8.02□□□□□ -1.13
CAPN3-201ENST00000318023 ST3GAL6Q9Y274 331 aa8.02□□□□□ -1.13
CAPN3-201ENST00000318023 WIPI2Q9Y4P8 454 aa8.02□□□□□ -1.13
CAPN3-201ENST00000318023 TRAPPC1Q9Y5R8 145 aa8.02□□□□□ -1.13
CAPN3-201ENST00000318023 DOCK7Q96N67 2140 aa8.02□□□□□ -1.13
CAPN3-201ENST00000318023 UNC79Q9P2D8 2635 aa8.02□□□□□ -1.13
CAPN3-201ENST00000318023 BLACEA4D250 179 aa8.02□□□□□ -1.13
CAPN3-201ENST00000318023 CCL21O00585 134 aa8.02□□□□□ -1.13
CAPN3-201ENST00000318023 NUDT14O95848 222 aa8.02□□□□□ -1.13
CAPN3-201ENST00000318023 HLA-HP01893 362 aa8.02□□□□□ -1.13
CAPN3-201ENST00000318023 CT45A8P0DMV1 189 aa8.02□□□□□ -1.13
CAPN3-201ENST00000318023 CT45A9P0DMV2 189 aa8.02□□□□□ -1.13
CAPN3-201ENST00000318023 COMPP49747 757 aaPredicted RBP8.02□□□□□ -1.13
CAPN3-201ENST00000318023 ZNF266Q14584 549 aa8.02□□□□□ -1.13
CAPN3-201ENST00000318023 CT45A2Q5DJT8 189 aa8.02□□□□□ -1.13
CAPN3-201ENST00000318023 WIPI1Q5MNZ9 446 aaPredicted RBP8.02□□□□□ -1.13
CAPN3-201ENST00000318023 IGFL2Q6UWQ7 119 aa8.02□□□□□ -1.13
CAPN3-201ENST00000318023 LGI3Q8N145 548 aa8.02□□□□□ -1.13
CAPN3-201ENST00000318023 TMEM251Q8N6I4 163 aa8.02□□□□□ -1.13
CAPN3-201ENST00000318023 RTN4RQ9BZR6 473 aa8.02□□□□□ -1.13
CAPN3-201ENST00000318023 Q9N2K0 584 aa8.02□□□□□ -1.13
CAPN3-201ENST00000318023 PRSS50Q9UI38 385 aa8.02□□□□□ -1.13
CAPN3-201ENST00000318023 VDAC3Q9Y277 283 aa8.02□□□□□ -1.13
CAPN3-201ENST00000318023 KLF13Q9Y2Y9 288 aaPredicted RBP8.02□□□□□ -1.13
CAPN3-201ENST00000318023 LRP12Q9Y561 859 aa8.02□□□□□ -1.13
CAPN3-201ENST00000318023 NBPF19A0A087WUL8 3843 aa8.02□□□□□ -1.13
CAPN3-201ENST00000318023 ZNF878C9JN71 531 aa8.02□□□□□ -1.13
CAPN3-201ENST00000318023 SAP30O75446 220 aa8.02□□□□□ -1.13
CAPN3-201ENST00000318023 OR6A2O95222 327 aa8.02□□□□□ -1.13
CAPN3-201ENST00000318023 HPNP05981 417 aa8.02□□□□□ -1.13
CAPN3-201ENST00000318023 HIST1H1DP16402 221 aaKnown RBP8.02□□□□□ -1.13
CAPN3-201ENST00000318023 FSTP19883 344 aa8.02□□□□□ -1.13
CAPN3-201ENST00000318023 SFTPDP35247 375 aa8.02□□□□□ -1.13
CAPN3-201ENST00000318023 QRFPP83859 136 aa8.02□□□□□ -1.13
CAPN3-201ENST00000318023 BSXQ3C1V8 233 aa8.02□□□□□ -1.13
CAPN3-201ENST00000318023 CFAP161Q6P656 301 aa8.02□□□□□ -1.13
CAPN3-201ENST00000318023 OR56B2PQ8NGI1 322 aa8.02□□□□□ -1.13
CAPN3-201ENST00000318023 OR4D5Q8NGN0 318 aa8.02□□□□□ -1.13
CAPN3-201ENST00000318023 ADIPOR1Q96A54 375 aa8.02□□□□□ -1.13
CAPN3-201ENST00000318023 ZNF845Q96IR2 970 aaPredicted RBP8.02□□□□□ -1.13
CAPN3-201ENST00000318023 ATP5SQ99766 215 aa8.02□□□□□ -1.13
CAPN3-201ENST00000318023 DNAJB12Q9NXW2 375 aaKnown RBP8.02□□□□□ -1.13
CAPN3-201ENST00000318023 CLN8Q9UBY8 286 aa8.02□□□□□ -1.13
CAPN3-201ENST00000318023 HSPB7Q9UBY9 170 aa8.02□□□□□ -1.13
CAPN3-201ENST00000318023 HHLA2Q9UM44 414 aa8.02□□□□□ -1.13
CAPN3-201ENST00000318023 SLC45A2Q9UMX9 530 aa8.02□□□□□ -1.13
CAPN3-201ENST00000318023 TMEM14AQ9Y6G1 99 aa8.02□□□□□ -1.13
CAPN3-201ENST00000318023 PCNX3Q9H6A9 2034 aa8.02□□□□□ -1.13
CAPN3-201ENST00000318023 IGKV1D-8A0A087WSZ0 117 aa8.01□□□□□ -1.13
CAPN3-201ENST00000318023 MEGF11A6BM72 1044 aa8.01□□□□□ -1.13
CAPN3-201ENST00000318023 C22orf46C9J442 243 aa8.01□□□□□ -1.13
CAPN3-201ENST00000318023 SH2D1BO14796 132 aa8.01□□□□□ -1.13
CAPN3-201ENST00000318023 ST8SIA3O43173 380 aa8.01□□□□□ -1.13
CAPN3-201ENST00000318023 NBEAP1P0C6P0 100 aa8.01□□□□□ -1.13
CAPN3-201ENST00000318023 TNFSF4P23510 183 aa8.01□□□□□ -1.13
CAPN3-201ENST00000318023 CSNK1A1P48729 337 aa8.01□□□□□ -1.13
CAPN3-201ENST00000318023 SRSF1Q07955 248 aaKnown RBP eCLIP8.01□□□□□ -1.13
CAPN3-201ENST00000318023 PHLDA2Q53GA4 152 aa8.01□□□□□ -1.13
CAPN3-201ENST00000318023 C1orf140Q5VVS0 124 aa8.01□□□□□ -1.13
CAPN3-201ENST00000318023 ZNF787Q6DD87 383 aa8.01□□□□□ -1.13
CAPN3-201ENST00000318023 PRR27Q6MZM9 219 aa8.01□□□□□ -1.13
CAPN3-201ENST00000318023 ATOH7Q8N100 152 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms